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The map label for this gene is 46447512

Identifier: 46447512

GI number: 46447512

Start: 2238592

End: 2239479

Strand: Reverse

Name: 46447512

Synonym: pc1878

Alternate gene names: NA

Gene position: 2239479-2238592 (Counterclockwise)

Preceding gene: 46447513

Following gene: 46447511

Centisome position: 92.75

GC content: 29.39

Gene sequence:

>888_bases
ATGTTTTATTCATTTTTTCGAAGAATACATCTTTTTTTATTTTTATATATTTTTATGGGCCAGCTAATGGCTGTAGATTT
ACATTCCAGTGATCAACAAACTGTGCTTTTAGCCTTATTAGCTCGTAATAAAGAACACACACTTCCTGCGTTCTTAAATT
GTATTGAACATTTAGATTATGATAAGAAATGTATCTCAATTTATATTCATACTAACAACAATATTGATAAGACTCAGGAA
ATTTTGGAAGCCTGGGTTAAAGAAAAAGGAAATTTATATAAGGATGTCATCTTTGTTAAACAAGATTTGAACACAGTTTT
AACAAATCGCCCTCATGAATGGACTCCAGAAAGATTTAAAATTTTGGCAAAAATTAGAAATGACAGTTTGGAATATGCCA
AGCTTTTAAAGTCAGATTATTATTTTGTTGTCGATTGTGATAATTTTATTACAGCTGATACTTTAAAAGACCTTATCAAA
CAAGATAAGCCTATTATTGCGCCCTTGTTACGATCTTTAGAAACTAATAATTATTATAGTAATTTTTTTTGTGCAATTGA
TGAAACGGGATATTACGGTTATCATCTCGACTATTTAAAAATCGTATCATATGAAAAGATTGGTGTTTTCAAAGTTCCTG
TTGTTCATTGCACCTATCTGATTCAGTCTAAATATCTTGATCAACTGAGCTATATTGATGGATCAGAGGATTATGAGTTT
GTCATTTTTTCTAGGAAGGCACGTGAAAAAAATGTCGATCAATATATTAGTAATGAAAAAAAATACGGATATTTGGTTCA
TTTTTTCGATAATCTTTCTTTAGAAGAAGAAAAAGAACGCATGGCATCAATAAATATTCTTAGGAGAATAGCGGATTTAA
GGCATTAA

Upstream 100 bases:

>100_bases
ATTGGTGTGATAGATCCATGAGTGATGGAAATGATTAGGCTTATTTTTCAATTTTATTAAATTTATAGTTTTTTTAAACA
ATCCTTCACCAATAGCTCCT

Downstream 100 bases:

>100_bases
CTACTCTCTTTCTTCACAGATCTTTAAATTACTGAAAATAAACAATATAGTGTTTGAGATGGCATTTTTCAAAATGATAT
AAATCAAAAATTTAGGAAGT

Product: putative procollagen-lysine 5-dioxygenase

Products: NA

Alternate protein names: Procollagen-Lysine 5-Dioxygenase

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MFYSFFRRIHLFLFLYIFMGQLMAVDLHSSDQQTVLLALLARNKEHTLPAFLNCIEHLDYDKKCISIYIHTNNNIDKTQE
ILEAWVKEKGNLYKDVIFVKQDLNTVLTNRPHEWTPERFKILAKIRNDSLEYAKLLKSDYYFVVDCDNFITADTLKDLIK
QDKPIIAPLLRSLETNNYYSNFFCAIDETGYYGYHLDYLKIVSYEKIGVFKVPVVHCTYLIQSKYLDQLSYIDGSEDYEF
VIFSRKAREKNVDQYISNEKKYGYLVHFFDNLSLEEEKERMASINILRRIADLRH

Sequences:

>Translated_295_residues
MFYSFFRRIHLFLFLYIFMGQLMAVDLHSSDQQTVLLALLARNKEHTLPAFLNCIEHLDYDKKCISIYIHTNNNIDKTQE
ILEAWVKEKGNLYKDVIFVKQDLNTVLTNRPHEWTPERFKILAKIRNDSLEYAKLLKSDYYFVVDCDNFITADTLKDLIK
QDKPIIAPLLRSLETNNYYSNFFCAIDETGYYGYHLDYLKIVSYEKIGVFKVPVVHCTYLIQSKYLDQLSYIDGSEDYEF
VIFSRKAREKNVDQYISNEKKYGYLVHFFDNLSLEEEKERMASINILRRIADLRH
>Mature_295_residues
MFYSFFRRIHLFLFLYIFMGQLMAVDLHSSDQQTVLLALLARNKEHTLPAFLNCIEHLDYDKKCISIYIHTNNNIDKTQE
ILEAWVKEKGNLYKDVIFVKQDLNTVLTNRPHEWTPERFKILAKIRNDSLEYAKLLKSDYYFVVDCDNFITADTLKDLIK
QDKPIIAPLLRSLETNNYYSNFFCAIDETGYYGYHLDYLKIVSYEKIGVFKVPVVHCTYLIQSKYLDQLSYIDGSEDYEF
VIFSRKAREKNVDQYISNEKKYGYLVHFFDNLSLEEEKERMASINILRRIADLRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI16506820, Length=264, Percent_Identity=35.9848484848485, Blast_Score=169, Evalue=3e-42,
Organism=Homo sapiens, GI193788560, Length=268, Percent_Identity=31.7164179104478, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI31377697, Length=263, Percent_Identity=30.0380228136882, Blast_Score=138, Evalue=5e-33,
Organism=Homo sapiens, GI62739166, Length=253, Percent_Identity=31.2252964426877, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI33636742, Length=209, Percent_Identity=32.0574162679426, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI4505891, Length=238, Percent_Identity=24.7899159663866, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI32307144, Length=239, Percent_Identity=27.6150627615063, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17535123, Length=227, Percent_Identity=28.6343612334802, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24581946, Length=259, Percent_Identity=32.046332046332, Blast_Score=136, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24662595, Length=250, Percent_Identity=26.8, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24662591, Length=250, Percent_Identity=26.8, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35115; Mature: 35115

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYSFFRRIHLFLFLYIFMGQLMAVDLHSSDQQTVLLALLARNKEHTLPAFLNCIEHLDY
CHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
DKKCISIYIHTNNNIDKTQEILEAWVKEKGNLYKDVIFVKQDLNTVLTNRPHEWTPERFK
CCEEEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
ILAKIRNDSLEYAKLLKSDYYFVVDCDNFITADTLKDLIKQDKPIIAPLLRSLETNNYYS
HHHHHHCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
NFFCAIDETGYYGYHLDYLKIVSYEKIGVFKVPVVHCTYLIQSKYLDQLSYIDGSEDYEF
EEEEEEECCCCCEEEEHHHHEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEE
VIFSRKAREKNVDQYISNEKKYGYLVHFFDNLSLEEEKERMASINILRRIADLRH
EEEECHHHHCCHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFYSFFRRIHLFLFLYIFMGQLMAVDLHSSDQQTVLLALLARNKEHTLPAFLNCIEHLDY
CHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
DKKCISIYIHTNNNIDKTQEILEAWVKEKGNLYKDVIFVKQDLNTVLTNRPHEWTPERFK
CCEEEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
ILAKIRNDSLEYAKLLKSDYYFVVDCDNFITADTLKDLIKQDKPIIAPLLRSLETNNYYS
HHHHHHCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
NFFCAIDETGYYGYHLDYLKIVSYEKIGVFKVPVVHCTYLIQSKYLDQLSYIDGSEDYEF
EEEEEEECCCCCEEEEHHHHEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEE
VIFSRKAREKNVDQYISNEKKYGYLVHFFDNLSLEEEKERMASINILRRIADLRH
EEEECHHHHCCHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA