Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447453

Identifier: 46447453

GI number: 46447453

Start: 2173907

End: 2174185

Strand: Reverse

Name: 46447453

Synonym: pc1819

Alternate gene names: NA

Gene position: 2174185-2173907 (Counterclockwise)

Preceding gene: 46447454

Following gene: 46447452

Centisome position: 90.05

GC content: 38.35

Gene sequence:

>279_bases
ATGAAAAATCAGACAATTAAAACCCGTAGGCAAAGGTTTAGTCATACCTCACTTTCTTTTACTTCTGAATCCGTTGCGAT
TGAACATCCTGAAAATGGCAGATCAAATTTCAGTTGCCATTTAGATGCTTGTTTAATGATCGATCAGAATGCTCAAGTGG
CCTGTGTAATACTTGTTTGCCGAGGGATGGTTTTTATTGCGGAGAGATCACCATTCACGCAACGACTGATTATCAAGAAA
TTGCTCGTAGACTCAGACAATCAAAGAAATTGGTTATGA

Upstream 100 bases:

>100_bases
TTCCTTTCTTTAATTTAAAAAATTTGCCTTAAAAGCCATCAAAGAGGATAAAAAGGGGGAGAGGGAGTATTTTTATCCTG
AAAACTTTAAATTAAAAAAA

Downstream 100 bases:

>100_bases
AAATCCCGAGTTAGGATTCGATTATCAATCTTGTGGCGTAATAAACTCTCTCAGTAAGCAATCCCAAGATATTGCCCAGG
TTGCGTTAATGAAGCATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MKNQTIKTRRQRFSHTSLSFTSESVAIEHPENGRSNFSCHLDACLMIDQNAQVACVILVCRGMVFIAERSPFTQRLIIKK
LLVDSDNQRNWL

Sequences:

>Translated_92_residues
MKNQTIKTRRQRFSHTSLSFTSESVAIEHPENGRSNFSCHLDACLMIDQNAQVACVILVCRGMVFIAERSPFTQRLIIKK
LLVDSDNQRNWL
>Mature_92_residues
MKNQTIKTRRQRFSHTSLSFTSESVAIEHPENGRSNFSCHLDACLMIDQNAQVACVILVCRGMVFIAERSPFTQRLIIKK
LLVDSDNQRNWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10595; Mature: 10595

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNQTIKTRRQRFSHTSLSFTSESVAIEHPENGRSNFSCHLDACLMIDQNAQVACVILVC
CCCCHHHHHHHHCCCCCCEECCCCEEEECCCCCCCCEEEEEEEEEEECCCCCEEHHHHHH
RGMVFIAERSPFTQRLIIKKLLVDSDNQRNWL
CCEEEEECCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKNQTIKTRRQRFSHTSLSFTSESVAIEHPENGRSNFSCHLDACLMIDQNAQVACVILVC
CCCCHHHHHHHHCCCCCCEECCCCEEEECCCCCCCCEEEEEEEEEEECCCCCEEHHHHHH
RGMVFIAERSPFTQRLIIKKLLVDSDNQRNWL
CCEEEEECCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA