Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is gltT [H]
Identifier: 46447419
GI number: 46447419
Start: 2140226
End: 2141455
Strand: Reverse
Name: gltT [H]
Synonym: pc1785
Alternate gene names: 46447419
Gene position: 2141455-2140226 (Counterclockwise)
Preceding gene: 46447420
Following gene: 46447418
Centisome position: 88.69
GC content: 37.32
Gene sequence:
>1230_bases ATGAAGTTGTGGCTGAAAATTTTCATTGGTTTGGCGTTAGGTGTTTTAGCAGGAATTATTTTGGGAGAAAGGGCTGCTTT ATTAAAGCCTTTAGGAACTATTTTTCTCAATTTGATCAACATGATTATTCCTTTGTTGATTCTCTCTTCAATGGCTATAG GAATCACAAGTATTCACGATCCTCAAAAATTAGGGCGCGTGGGGGGTAAAACGATTGGGATTTATTTCATTACAACAGTC ATTTCTATTTTAATCGGTATATTATTTGCTAATTCTTTTCAAGTTGGTTCAGGCCTTCATTTAACATCTGTCAATATCAT AGAAGCAAAAACTCCTTCTTTTAGTGAAATTATTGTCTCAATTATTCCGAGCAATCCAGTTGCTGCTTTAGCGAGTGGGA GTATTTTGCAAATCATTGTTTTTGCAGTTTTTTTAGGAATTGCAATTAATTTTTCTGGAGAAAAGGGAATTCCTTTAAAA AACTTTTTAGAATCTTTAGCTGATGTCATGTACCGTTTAACTTCATTAGTGATGGAATTTTCTCCGATTGGAGTTTTTGG CATCATGGCTTGGGTCGCTGGGACGTTTGGTATTTCTTTATTGATCCCTTTGTTTAAATTTTTAGGCGTTTATTATTTAG CTTGTCTCATTCATTTGGCAGTTGTTTACAGCCTTATTTTATTAAAAGGATTAGGACATTTGCAGATTTTACCTTTTTTT AAAGGAATGGGTGACGCCATTATGATGGCTTTTTCAACAGGAAGTAGCGCAGCAACTTTACCTGTGGCCATGCACTGTTT ACAAGAGAACTTAGGTGTTTCAAAAAATATTTCAAATTTTGTCCTTCCTCTTGGCTTGACAATGAATATGAACGGTTCAG CTATCTTTCAAGCCATGAGTGCTATATTTATTGCAAAAGCCTATGCGATCCCATTAGACCTATCTGCTTACATTACACTT TTAATGACAGCAACCATGGCTGCCATCGGGACCGCTGGGGTTCCTGGAGGCGGATTTGTGATGCTCTCGGCGGTCCTTAC TTCACTAGGACTTCCTTTAGAAGGTTTAGCTGTTTTAGTGGGTATCGATCGGTTACGAGAAATGGTTACCACAGTATTGA ATATTTTAGGCGATGCTGCAGTGACAGTGTTTATTGCTAAGCAAGAGGGCGAGTTGGACGAACGTAAATATTACCATACT GAACTTGTCGAATTCGAAGGGAAAATCTAA
Upstream 100 bases:
>100_bases AAAACGAATGGAATTCCTTTCTTGCACAGGCTGAAGCTAAAATTTCTTAAAAATCTTTCGCTATTTCAAATTGTTTAATG ACGAGGCATGAATTAAAAGT
Downstream 100 bases:
>100_bases TTTATGCTTTATTTATAGATTAGGTATAAAGATCATAGAATATGTCAGAGTCTACAAAAATGAATTGGTTATCAAAAGAT TTTATTCAATATGATAAAGG
Product: putative proton/sodium-glutamate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MKLWLKIFIGLALGVLAGIILGERAALLKPLGTIFLNLINMIIPLLILSSMAIGITSIHDPQKLGRVGGKTIGIYFITTV ISILIGILFANSFQVGSGLHLTSVNIIEAKTPSFSEIIVSIIPSNPVAALASGSILQIIVFAVFLGIAINFSGEKGIPLK NFLESLADVMYRLTSLVMEFSPIGVFGIMAWVAGTFGISLLIPLFKFLGVYYLACLIHLAVVYSLILLKGLGHLQILPFF KGMGDAIMMAFSTGSSAATLPVAMHCLQENLGVSKNISNFVLPLGLTMNMNGSAIFQAMSAIFIAKAYAIPLDLSAYITL LMTATMAAIGTAGVPGGGFVMLSAVLTSLGLPLEGLAVLVGIDRLREMVTTVLNILGDAAVTVFIAKQEGELDERKYYHT ELVEFEGKI
Sequences:
>Translated_409_residues MKLWLKIFIGLALGVLAGIILGERAALLKPLGTIFLNLINMIIPLLILSSMAIGITSIHDPQKLGRVGGKTIGIYFITTV ISILIGILFANSFQVGSGLHLTSVNIIEAKTPSFSEIIVSIIPSNPVAALASGSILQIIVFAVFLGIAINFSGEKGIPLK NFLESLADVMYRLTSLVMEFSPIGVFGIMAWVAGTFGISLLIPLFKFLGVYYLACLIHLAVVYSLILLKGLGHLQILPFF KGMGDAIMMAFSTGSSAATLPVAMHCLQENLGVSKNISNFVLPLGLTMNMNGSAIFQAMSAIFIAKAYAIPLDLSAYITL LMTATMAAIGTAGVPGGGFVMLSAVLTSLGLPLEGLAVLVGIDRLREMVTTVLNILGDAAVTVFIAKQEGELDERKYYHT ELVEFEGKI >Mature_409_residues MKLWLKIFIGLALGVLAGIILGERAALLKPLGTIFLNLINMIIPLLILSSMAIGITSIHDPQKLGRVGGKTIGIYFITTV ISILIGILFANSFQVGSGLHLTSVNIIEAKTPSFSEIIVSIIPSNPVAALASGSILQIIVFAVFLGIAINFSGEKGIPLK NFLESLADVMYRLTSLVMEFSPIGVFGIMAWVAGTFGISLLIPLFKFLGVYYLACLIHLAVVYSLILLKGLGHLQILPFF KGMGDAIMMAFSTGSSAATLPVAMHCLQENLGVSKNISNFVLPLGLTMNMNGSAIFQAMSAIFIAKAYAIPLDLSAYITL LMTATMAAIGTAGVPGGGFVMLSAVLTSLGLPLEGLAVLVGIDRLREMVTTVLNILGDAAVTVFIAKQEGELDERKYYHT ELVEFEGKI
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI4827012, Length=290, Percent_Identity=35.8620689655172, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI66773030, Length=448, Percent_Identity=29.9107142857143, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI21314632, Length=394, Percent_Identity=31.2182741116751, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI223468566, Length=264, Percent_Identity=38.2575757575758, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI5032093, Length=411, Percent_Identity=31.1435523114355, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI223468564, Length=258, Percent_Identity=38.3720930232558, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI40254478, Length=441, Percent_Identity=26.7573696145125, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI169790839, Length=263, Percent_Identity=34.2205323193916, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI194239697, Length=258, Percent_Identity=35.6589147286822, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI301601644, Length=164, Percent_Identity=40.8536585365854, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI262359914, Length=204, Percent_Identity=32.3529411764706, Blast_Score=101, Evalue=1e-21, Organism=Escherichia coli, GI1790514, Length=418, Percent_Identity=34.688995215311, Blast_Score=240, Evalue=1e-64, Organism=Escherichia coli, GI1789947, Length=404, Percent_Identity=32.1782178217822, Blast_Score=221, Evalue=9e-59, Organism=Escherichia coli, GI1788024, Length=409, Percent_Identity=29.3398533007335, Blast_Score=131, Evalue=9e-32, Organism=Escherichia coli, GI1789473, Length=376, Percent_Identity=28.1914893617021, Blast_Score=105, Evalue=4e-24, Organism=Caenorhabditis elegans, GI71983106, Length=429, Percent_Identity=29.3706293706294, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI71983099, Length=429, Percent_Identity=29.3706293706294, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI71996953, Length=454, Percent_Identity=27.9735682819383, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI193206505, Length=449, Percent_Identity=30.0668151447661, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17537407, Length=418, Percent_Identity=29.4258373205742, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17541374, Length=398, Percent_Identity=29.1457286432161, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI193206654, Length=429, Percent_Identity=27.7389277389277, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI24583025, Length=407, Percent_Identity=28.009828009828, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI17137668, Length=407, Percent_Identity=28.009828009828, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI24583023, Length=407, Percent_Identity=28.009828009828, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI281360483, Length=263, Percent_Identity=30.4182509505703, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI17137666, Length=263, Percent_Identity=30.4182509505703, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI281360481, Length=263, Percent_Identity=30.4182509505703, Blast_Score=85, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43456; Mature: 43456
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLWLKIFIGLALGVLAGIILGERAALLKPLGTIFLNLINMIIPLLILSSMAIGITSIHD CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PQKLGRVGGKTIGIYFITTVISILIGILFANSFQVGSGLHLTSVNIIEAKTPSFSEIIVS HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHHHHH IIPSNPVAALASGSILQIIVFAVFLGIAINFSGEKGIPLKNFLESLADVMYRLTSLVMEF HCCCCCHHHHHCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SPIGVFGIMAWVAGTFGISLLIPLFKFLGVYYLACLIHLAVVYSLILLKGLGHLQILPFF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH KGMGDAIMMAFSTGSSAATLPVAMHCLQENLGVSKNISNFVLPLGLTMNMNGSAIFQAMS HCCCHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHEEECCEEECCCHHHHHHHHH AIFIAKAYAIPLDLSAYITLLMTATMAAIGTAGVPGGGFVMLSAVLTSLGLPLEGLAVLV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH GIDRLREMVTTVLNILGDAAVTVFIAKQEGELDERKYYHTELVEFEGKI HHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKLWLKIFIGLALGVLAGIILGERAALLKPLGTIFLNLINMIIPLLILSSMAIGITSIHD CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PQKLGRVGGKTIGIYFITTVISILIGILFANSFQVGSGLHLTSVNIIEAKTPSFSEIIVS HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHHHHH IIPSNPVAALASGSILQIIVFAVFLGIAINFSGEKGIPLKNFLESLADVMYRLTSLVMEF HCCCCCHHHHHCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SPIGVFGIMAWVAGTFGISLLIPLFKFLGVYYLACLIHLAVVYSLILLKGLGHLQILPFF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH KGMGDAIMMAFSTGSSAATLPVAMHCLQENLGVSKNISNFVLPLGLTMNMNGSAIFQAMS HCCCHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHEEECCEEECCCHHHHHHHHH AIFIAKAYAIPLDLSAYITLLMTATMAAIGTAGVPGGGFVMLSAVLTSLGLPLEGLAVLV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH GIDRLREMVTTVLNILGDAAVTVFIAKQEGELDERKYYHTELVEFEGKI HHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1359385 [H]