Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is yqeV [C]
Identifier: 46447397
GI number: 46447397
Start: 2108901
End: 2110205
Strand: Reverse
Name: yqeV [C]
Synonym: pc1763
Alternate gene names: 46447397
Gene position: 2110205-2108901 (Counterclockwise)
Preceding gene: 46447398
Following gene: 46447396
Centisome position: 87.4
GC content: 38.54
Gene sequence:
>1305_bases ATGGAAAACGAAACTAATAAATTTAAAATTATAACTTTAGGTTGTCGGACAAATCAGTATGAGTCACAAGCCTATCAAAA TCAATTGCTGAGGATGGGATATCAGGAAGCTAAAGAAGGTGAAAAAGCTGACATCTGTATTGTCAATACATGCACGGTTA CGGAATCTGCAGATAGTAGTAGTCGACATGCTATTAGGCAATTAGCAAGAGAGAACCAAGGAACGCAACTGTTAGTGGCT GGATGTTTTGCCGAAAGGCAACCAGAAGTCATTCAGAAGATAGATGGGGTCACGCATGTCATTCCCAATCGGGAAAAAGA ACAGTTGCTGGCTCGTTTATTCCCTAAAGAAAATCTCCCTGAATTTTCAATCACTCAATTTGATTCGCATACAAGGGCTT TTATTAAAGTGCAAGATGGCTGTAATTCTTTTTGTACTTATTGTATTATTCCTTATGTAAGAGGGCGTTCTCGTTCAAGA AGTGTGGAAGAAGTTCTCGAAGAAGCAAAAGCATTGATTTCGAATGGATATAAAGAAATTGTTTTAACAGGAATTAACAT TGGTGATTTTGATGGAAAAGTTGCTAAAGGGGAAACTCCTGTTAGACTATCCGAACTTGTTCGAATGGTGGATCAATTGC CTGGTTTAGAGCGCCTTCGCTTATCTTCAATAGACCCTGACGAGGTAGATGATGAATTAAGTGACGCCATTCTAAATGGG AAGCATACATGTCATTCGATGCACATCGTTTTGCAATCAGGATCGAATGTCATTTTAAAACGTATGAATCGCAAATATAC AAGGCAAATTTTTTTAGATACTATTGATAAATTAAAAGCGGCTCACTCCGATTTTACTTTTACGACAGATATTATCGTGG GTTTTCCAGGAGAGACAGATTTAGACTTTCAAGATACGATAGAAGTTATGAAGCATGTTAAATTTGCTAAAGTGCATATG TTTCCTTACAGTGATCGACCTCGCACACGCTCGAATCTGATGCCAAACAAAGTTTCACCTGAAATGATACGGATGCGCAA ACAGGAAATTTTACGCGTTGCAGAGCAAACTGCTTACAAGTTGCGAGAAGGTTATCTCAATCGACGCATGAAGATTTTAA CGGAAAGCATAGATGAAGCAAGGCCTGGCGAAATTCACGGGCATACAGAGAATTTCTTAAGTGTATGGATTCAGGATGAA GGCATTCAATCTAATAAGATTGTTGAAGTAGAGCTCGTAGCTAATACACCTGCAGGGCTAATTGGAAAGCCATGTCTAAA TCCTTTCAAATTATACCAACCTTAG
Upstream 100 bases:
>100_bases AAAAATTCTTTCATTCAAGTTAGCTAACTAACGTGAGTTTATTTTCTCAATTTGATATATTTTTAAGCGAATTACATCTG AAAATACATAAAGTAAATGC
Downstream 100 bases:
>100_bases TAGGTAGGTAACATCTTTAGTAAAAACTCAACTTAAGTTAATAAATAATGATTAAGATTGCAGAGCGGTTGCGCCCTTTT AGTCACCAAAGTGGGACTTT
Product: putative 2-methylthioadenine synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MENETNKFKIITLGCRTNQYESQAYQNQLLRMGYQEAKEGEKADICIVNTCTVTESADSSSRHAIRQLARENQGTQLLVA GCFAERQPEVIQKIDGVTHVIPNREKEQLLARLFPKENLPEFSITQFDSHTRAFIKVQDGCNSFCTYCIIPYVRGRSRSR SVEEVLEEAKALISNGYKEIVLTGINIGDFDGKVAKGETPVRLSELVRMVDQLPGLERLRLSSIDPDEVDDELSDAILNG KHTCHSMHIVLQSGSNVILKRMNRKYTRQIFLDTIDKLKAAHSDFTFTTDIIVGFPGETDLDFQDTIEVMKHVKFAKVHM FPYSDRPRTRSNLMPNKVSPEMIRMRKQEILRVAEQTAYKLREGYLNRRMKILTESIDEARPGEIHGHTENFLSVWIQDE GIQSNKIVEVELVANTPAGLIGKPCLNPFKLYQP
Sequences:
>Translated_434_residues MENETNKFKIITLGCRTNQYESQAYQNQLLRMGYQEAKEGEKADICIVNTCTVTESADSSSRHAIRQLARENQGTQLLVA GCFAERQPEVIQKIDGVTHVIPNREKEQLLARLFPKENLPEFSITQFDSHTRAFIKVQDGCNSFCTYCIIPYVRGRSRSR SVEEVLEEAKALISNGYKEIVLTGINIGDFDGKVAKGETPVRLSELVRMVDQLPGLERLRLSSIDPDEVDDELSDAILNG KHTCHSMHIVLQSGSNVILKRMNRKYTRQIFLDTIDKLKAAHSDFTFTTDIIVGFPGETDLDFQDTIEVMKHVKFAKVHM FPYSDRPRTRSNLMPNKVSPEMIRMRKQEILRVAEQTAYKLREGYLNRRMKILTESIDEARPGEIHGHTENFLSVWIQDE GIQSNKIVEVELVANTPAGLIGKPCLNPFKLYQP >Mature_434_residues MENETNKFKIITLGCRTNQYESQAYQNQLLRMGYQEAKEGEKADICIVNTCTVTESADSSSRHAIRQLARENQGTQLLVA GCFAERQPEVIQKIDGVTHVIPNREKEQLLARLFPKENLPEFSITQFDSHTRAFIKVQDGCNSFCTYCIIPYVRGRSRSR SVEEVLEEAKALISNGYKEIVLTGINIGDFDGKVAKGETPVRLSELVRMVDQLPGLERLRLSSIDPDEVDDELSDAILNG KHTCHSMHIVLQSGSNVILKRMNRKYTRQIFLDTIDKLKAAHSDFTFTTDIIVGFPGETDLDFQDTIEVMKHVKFAKVHM FPYSDRPRTRSNLMPNKVSPEMIRMRKQEILRVAEQTAYKLREGYLNRRMKILTESIDEARPGEIHGHTENFLSVWIQDE GIQSNKIVEVELVANTPAGLIGKPCLNPFKLYQP
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MTTase N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI28872782, Length=437, Percent_Identity=25.1716247139588, Blast_Score=161, Evalue=9e-40, Organism=Homo sapiens, GI28872784, Length=437, Percent_Identity=25.1716247139588, Blast_Score=161, Evalue=9e-40, Organism=Homo sapiens, GI93277076, Length=450, Percent_Identity=28, Blast_Score=153, Evalue=3e-37, Organism=Escherichia coli, GI1786882, Length=438, Percent_Identity=29.6803652968037, Blast_Score=191, Evalue=7e-50, Organism=Escherichia coli, GI1787057, Length=391, Percent_Identity=29.6675191815857, Blast_Score=151, Evalue=9e-38, Organism=Caenorhabditis elegans, GI17553146, Length=424, Percent_Identity=25.2358490566038, Blast_Score=167, Evalue=9e-42, Organism=Caenorhabditis elegans, GI71996771, Length=380, Percent_Identity=25.2631578947368, Blast_Score=101, Evalue=8e-22, Organism=Drosophila melanogaster, GI21356207, Length=363, Percent_Identity=28.6501377410468, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI19922432, Length=415, Percent_Identity=26.7469879518072, Blast_Score=136, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR013848 - InterPro: IPR006467 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM; PF00919 UPF0004 [H]
EC number: NA
Molecular weight: Translated: 49438; Mature: 49438
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00260 GLUCAGON ; PS01278 UPF0004
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENETNKFKIITLGCRTNQYESQAYQNQLLRMGYQEAKEGEKADICIVNTCTVTESADSS CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCHHHHCCCCCCCEEEEEEEEEECCCCCH SRHAIRQLARENQGTQLLVAGCFAERQPEVIQKIDGVTHVIPNREKEQLLARLFPKENLP HHHHHHHHHHCCCCCEEEEEEHHHCCCHHHHHHHCCHHCCCCCCHHHHHHHHHCCCCCCC EFSITQFDSHTRAFIKVQDGCNSFCTYCIIPYVRGRSRSRSVEEVLEEAKALISNGYKEI CCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEE VLTGINIGDFDGKVAKGETPVRLSELVRMVDQLPGLERLRLSSIDPDEVDDELSDAILNG EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHHHCC KHTCHSMHIVLQSGSNVILKRMNRKYTRQIFLDTIDKLKAAHSDFTFTTDIIVGFPGETD CCHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCC LDFQDTIEVMKHVKFAKVHMFPYSDRPRTRSNLMPNKVSPEMIRMRKQEILRVAEQTAYK CCHHHHHHHHHHCHHHEEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LREGYLNRRMKILTESIDEARPGEIHGHTENFLSVWIQDEGIQSNKIVEVELVANTPAGL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCC IGKPCLNPFKLYQP CCCCCCCCCCCCCC >Mature Secondary Structure MENETNKFKIITLGCRTNQYESQAYQNQLLRMGYQEAKEGEKADICIVNTCTVTESADSS CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCHHHHCCCCCCCEEEEEEEEEECCCCCH SRHAIRQLARENQGTQLLVAGCFAERQPEVIQKIDGVTHVIPNREKEQLLARLFPKENLP HHHHHHHHHHCCCCCEEEEEEHHHCCCHHHHHHHCCHHCCCCCCHHHHHHHHHCCCCCCC EFSITQFDSHTRAFIKVQDGCNSFCTYCIIPYVRGRSRSRSVEEVLEEAKALISNGYKEI CCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEE VLTGINIGDFDGKVAKGETPVRLSELVRMVDQLPGLERLRLSSIDPDEVDDELSDAILNG EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHHHCC KHTCHSMHIVLQSGSNVILKRMNRKYTRQIFLDTIDKLKAAHSDFTFTTDIIVGFPGETD CCHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCC LDFQDTIEVMKHVKFAKVHMFPYSDRPRTRSNLMPNKVSPEMIRMRKQEILRVAEQTAYK CCHHHHHHHHHHCHHHEEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LREGYLNRRMKILTESIDEARPGEIHGHTENFLSVWIQDEGIQSNKIVEVELVANTPAGL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCC IGKPCLNPFKLYQP CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]