Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is aaaT [C]
Identifier: 46447368
GI number: 46447368
Start: 2074246
End: 2075505
Strand: Reverse
Name: aaaT [C]
Synonym: pc1734
Alternate gene names: 46447368
Gene position: 2075505-2074246 (Counterclockwise)
Preceding gene: 46447369
Following gene: 46447367
Centisome position: 85.96
GC content: 35.48
Gene sequence:
>1260_bases ATGTGCAAAGAAGTCAAACACAAAATAAATCCAAATATATTTTTTGCTTTAGCAATCGTACTTGGTGTTTGTGCTGGCTA TGTTCAAGAGCCTCTTATCTTTCAGACAGCAGAAACAATTTCTCAATTATTCATTAATTTGTTGAAATTAGTTAGTTTAC CCATCATTTTTCTTTCCATTGTATCGACAGCTTCTGGAATGGAGAGTATGCATCAAATTAAAGTATTAGGCAAAAAAGTT GCAAAATATACGCTTTTAACAACTATCATCGCTGCGACAATTGCTCTAATCCTATTTGTGGTTATTGATCCAGTTAGAGG GCAAATCACTGTTAACGCCCAAGAAACGATCACTCAATCTTCGCAACCAACCTATCTAAAATTTTTTATCCAAATTATCC CCTCTAATGTCATTCAACCATTTAATGAAAACAATGTGATTGGAGTTTTATTTTTAGCAATGTTACTTAGCTTTGCCATT GTTTCTTTGCCCACTCAATCGAGAGCTGTCCTTCATTCTTTTTTTTCTAGTATTTATGCAGCGATTATTGTTATTACTCG TTGGGTTGTGGCGCTTATGCCTATTGCAATTTGGGCATTTATTACTTTATTCATGTATGATTTAAAACAAGGATTAGACG TCAAAAGCCTTGCACTTTATTTAACCGTTGTGATTTCCGCCAACCTTATTCAAGCTGGGTGCGTTTTACCTTTATTACTG AAGTTAAAAAAAATTTCACCTCTTTTTATGATAAAAGGAATGCTACCGGCTTTGTCAATTGCATTTTTTACTAAATCTTC TGCTGCTGCCTTACCAATGGCTATGCGTTGTGCAGAAGAAAATGTGGGAATTTCTCGCAAGGTTGCCAGTTTTACCCTTC CTCTTTGTATAACAATTAATATGAATGCTTGCGCTGCATTTATATTGACAACTGTCTTGTTTGTTTCGATGAGCCAGGGC ATTACCTATAGTTTTGCTGAAATGGGGCTTTGGATTATCTTATCAACAATTGCAGCCATAGGCAATGCTGGGGTTCCTAT GGGTTGTTACTTTTTAGCCAGTGCGTTTTTAGCCGCTATGAATGTGCCTCTTCATATTTTAGGAATTATTTTACCTTTCT ATTCGTTGATAGATATGCTAGAAAGTGCAATTAACGTATGGTCTGATTCTTGTGTAGCTGCGGTTGTTAATCAAGAAGTG AAGCAAGAGCAAATTTCTTTCGATCAAACACCCATAGATTTGAATTCTGTCATTATTTAA
Upstream 100 bases:
>100_bases CGTTGAATACTTCTCTTGAACCTTTGTAATTTTGTTAAAAGTAGAATGTTTAAGAGACTTACATGCATAAATTTTTCAGC TCATTAACAAAAGGTTATCA
Downstream 100 bases:
>100_bases ATTTAAGTTAACCAACTTTTTAACAACGGCAGTTGGTTGTTATTATCAATTGTCAACGAATTGGTTGTATTCTTATACCA TTTCTTTTTAAAAAGAAAAT
Product: putative neutral amino acid (glutamate) transporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MCKEVKHKINPNIFFALAIVLGVCAGYVQEPLIFQTAETISQLFINLLKLVSLPIIFLSIVSTASGMESMHQIKVLGKKV AKYTLLTTIIAATIALILFVVIDPVRGQITVNAQETITQSSQPTYLKFFIQIIPSNVIQPFNENNVIGVLFLAMLLSFAI VSLPTQSRAVLHSFFSSIYAAIIVITRWVVALMPIAIWAFITLFMYDLKQGLDVKSLALYLTVVISANLIQAGCVLPLLL KLKKISPLFMIKGMLPALSIAFFTKSSAAALPMAMRCAEENVGISRKVASFTLPLCITINMNACAAFILTTVLFVSMSQG ITYSFAEMGLWIILSTIAAIGNAGVPMGCYFLASAFLAAMNVPLHILGIILPFYSLIDMLESAINVWSDSCVAAVVNQEV KQEQISFDQTPIDLNSVII
Sequences:
>Translated_419_residues MCKEVKHKINPNIFFALAIVLGVCAGYVQEPLIFQTAETISQLFINLLKLVSLPIIFLSIVSTASGMESMHQIKVLGKKV AKYTLLTTIIAATIALILFVVIDPVRGQITVNAQETITQSSQPTYLKFFIQIIPSNVIQPFNENNVIGVLFLAMLLSFAI VSLPTQSRAVLHSFFSSIYAAIIVITRWVVALMPIAIWAFITLFMYDLKQGLDVKSLALYLTVVISANLIQAGCVLPLLL KLKKISPLFMIKGMLPALSIAFFTKSSAAALPMAMRCAEENVGISRKVASFTLPLCITINMNACAAFILTTVLFVSMSQG ITYSFAEMGLWIILSTIAAIGNAGVPMGCYFLASAFLAAMNVPLHILGIILPFYSLIDMLESAINVWSDSCVAAVVNQEV KQEQISFDQTPIDLNSVII >Mature_419_residues MCKEVKHKINPNIFFALAIVLGVCAGYVQEPLIFQTAETISQLFINLLKLVSLPIIFLSIVSTASGMESMHQIKVLGKKV AKYTLLTTIIAATIALILFVVIDPVRGQITVNAQETITQSSQPTYLKFFIQIIPSNVIQPFNENNVIGVLFLAMLLSFAI VSLPTQSRAVLHSFFSSIYAAIIVITRWVVALMPIAIWAFITLFMYDLKQGLDVKSLALYLTVVISANLIQAGCVLPLLL KLKKISPLFMIKGMLPALSIAFFTKSSAAALPMAMRCAEENVGISRKVASFTLPLCITINMNACAAFILTTVLFVSMSQG ITYSFAEMGLWIILSTIAAIGNAGVPMGCYFLASAFLAAMNVPLHILGIILPFYSLIDMLESAINVWSDSCVAAVVNQEV KQEQISFDQTPIDLNSVII
Specific function: This Carrier Protein Is Part Of The Na(+)-Independent, Binding-Protein-Independent Glutamate-Aspartate Transport System. [C]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=411, Percent_Identity=24.5742092457421, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI169790839, Length=483, Percent_Identity=24.8447204968944, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI223468566, Length=270, Percent_Identity=26.6666666666667, Blast_Score=109, Evalue=5e-24, Organism=Homo sapiens, GI4827012, Length=280, Percent_Identity=28.2142857142857, Blast_Score=109, Evalue=5e-24, Organism=Homo sapiens, GI223468564, Length=262, Percent_Identity=26.7175572519084, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI5032093, Length=270, Percent_Identity=26.6666666666667, Blast_Score=106, Evalue=5e-23, Organism=Homo sapiens, GI40254478, Length=471, Percent_Identity=22.9299363057325, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI66773030, Length=266, Percent_Identity=26.3157894736842, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI194239697, Length=261, Percent_Identity=27.2030651340996, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI262359914, Length=218, Percent_Identity=30.7339449541284, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI301601644, Length=142, Percent_Identity=29.5774647887324, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1790514, Length=424, Percent_Identity=23.8207547169811, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789947, Length=411, Percent_Identity=24.330900243309, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1788024, Length=389, Percent_Identity=23.6503856041131, Blast_Score=72, Evalue=5e-14, Organism=Caenorhabditis elegans, GI193206505, Length=438, Percent_Identity=27.6255707762557, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71996953, Length=463, Percent_Identity=26.7818574514039, Blast_Score=131, Evalue=6e-31, Organism=Caenorhabditis elegans, GI71983099, Length=460, Percent_Identity=25.2173913043478, Blast_Score=121, Evalue=7e-28, Organism=Caenorhabditis elegans, GI71983106, Length=460, Percent_Identity=25.2173913043478, Blast_Score=121, Evalue=9e-28, Organism=Caenorhabditis elegans, GI17537407, Length=446, Percent_Identity=25.3363228699552, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17541374, Length=414, Percent_Identity=26.3285024154589, Blast_Score=114, Evalue=9e-26, Organism=Caenorhabditis elegans, GI193206654, Length=415, Percent_Identity=26.0240963855422, Blast_Score=108, Evalue=8e-24, Organism=Drosophila melanogaster, GI24583025, Length=406, Percent_Identity=24.6305418719212, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI17137668, Length=406, Percent_Identity=24.6305418719212, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI24583023, Length=406, Percent_Identity=24.6305418719212, Blast_Score=112, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 45675; Mature: 45675
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCKEVKHKINPNIFFALAIVLGVCAGYVQEPLIFQTAETISQLFINLLKLVSLPIIFLSI CCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSTASGMESMHQIKVLGKKVAKYTLLTTIIAATIALILFVVIDPVRGQITVNAQETITQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHCC SQPTYLKFFIQIIPSNVIQPFNENNVIGVLFLAMLLSFAIVSLPTQSRAVLHSFFSSIYA CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AIIVITRWVVALMPIAIWAFITLFMYDLKQGLDVKSLALYLTVVISANLIQAGCVLPLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KLKKISPLFMIKGMLPALSIAFFTKSSAAALPMAMRCAEENVGISRKVASFTLPLCITIN HHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHEEECEEEEEC MNACAAFILTTVLFVSMSQGITYSFAEMGLWIILSTIAAIGNAGVPMGCYFLASAFLAAM HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH NVPLHILGIILPFYSLIDMLESAINVWSDSCVAAVVNQEVKQEQISFDQTPIDLNSVII CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCC >Mature Secondary Structure MCKEVKHKINPNIFFALAIVLGVCAGYVQEPLIFQTAETISQLFINLLKLVSLPIIFLSI CCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSTASGMESMHQIKVLGKKVAKYTLLTTIIAATIALILFVVIDPVRGQITVNAQETITQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHCC SQPTYLKFFIQIIPSNVIQPFNENNVIGVLFLAMLLSFAIVSLPTQSRAVLHSFFSSIYA CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AIIVITRWVVALMPIAIWAFITLFMYDLKQGLDVKSLALYLTVVISANLIQAGCVLPLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KLKKISPLFMIKGMLPALSIAFFTKSSAAALPMAMRCAEENVGISRKVASFTLPLCITIN HHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHEEECEEEEEC MNACAAFILTTVLFVSMSQGITYSFAEMGLWIILSTIAAIGNAGVPMGCYFLASAFLAAM HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH NVPLHILGIILPFYSLIDMLESAINVWSDSCVAAVVNQEVKQEQISFDQTPIDLNSVII CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]