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The map label for this gene is ptc1

Identifier: 46447363

GI number: 46447363

Start: 2067457

End: 2068917

Strand: Reverse

Name: ptc1

Synonym: pc1729

Alternate gene names: NA

Gene position: 2068917-2067457 (Counterclockwise)

Preceding gene: 46447364

Following gene: 46447359

Centisome position: 85.69

GC content: 35.87

Gene sequence:

>1461_bases
ATGTTAGAACTTTCGCTTGCAGCTCATCCTAAAGGGTACGAACTTAATAAAACAGAATTTTGCCAATCTCTCCTGTTTCA
TCCTTATGCTGTGAGACATTATGAACTATTCCGGCAAACTAATAAAGCCGGACACCTTTTTATAGCCTTTTTAGAATCGA
TTCCAATGGCTGGAGTTGTTATATCGGTAATTGAGAGAATTATTGTTATTGCCACTCAACTTTCAAAAAATCACTTATAC
TCTACCAATTCCACAAACCAAATTTTCCTATCTAATGTGATAAAAAGAAAAAAAGGAAAGGCGTTGGCAGTTTTTGTGGA
AACAAAAGGCTCAAATAGCAATTCGACAACTGAGGATTCATCAGAAATCACGTTGACGAACAGTGAGCTTTCAATCGTTA
ATAAGCAAGAAGAAAATGGCCTTTTATTACCTAATTCACAACTAAATACGCCCATTTTATTATCTGAAGCTCTCTCTTTA
CCTGCTCATACAACTGTAGAGCTTAAAATGATTAAAAATCTGAAAAAAGCTATTTTTGAACATAAATTAGTCGAGAAAAT
TGAGGATGCATCAGAAATAGCCAAAGAATTAACAAGACCTTTACGAACGATAGCAGAAAATGTGAAGTTTAGCGTTACCA
GTGCAGCAGAGCAAGGGTTTTTTCGCCCAACGATGGAAGATGCGCATTTTCATCTTTCCCTGCCTGATGGAGAATTACTA
GGTGTTTTTGATGGGCATGGAGAAAACGGGCAAGTCGCTCACTATGTTTCTGAAAGGGTGCAAAAGCTTTTTGTTGAAAG
AAAATCTGATTCAGAAGATATGATAGAAGTATTTAAAAATTTATTTAAAGATATTCATCAAGAAGTGATTACTAAAAAAA
TTGACTGCATCAACGGAAAATTAGTTGGAGGAAGTACTGCTGTTGTTTGTTATGTTTGCCGAAAAACTCTTAAAACAGTT
GTTGCTACTTTAGGTGATAGTGAAGTTTGGCATTTTCGGCAGCGGAAAGCCCTTATTAAAGCCACACCACTATCTTGCGT
ACGAAAATGGTCTTCAAAAAAAGATTTCAAACGAATAAATACTTACTGGCAACAGCATTTAGGTAGACTTACTTTATCTA
GAGATTTCAAGAGTATAAGTTTGAAGGGAGCGGGAACTCTTCAACCAAGTCGCTCAATTGGTGACCGTCAGTTTTGTTCT
GATCAAGCCTTCCCTCTTGTTAGCCAAGAACCCATTGTATCCATGATACAATTACAGCAAGGGGATCGCCTTATTGTAGC
TTGTGACGGTGTTTGGAATTTTCTTACTAAACAAATGAATCAACTGATAGAAACAGTCATTCAACACACTTGGGATAATG
AACAAATGAACATTGCTCAAGAAATTGCAAATTTGGCTTTGAGCAAACACAATGATTATGACAATGACAATGTATCTGTT
ATTAGTTTAAGAATTGATTAA

Upstream 100 bases:

>100_bases
ATTTGAATAGTTGATTTTTTTTTTATAAGTGTTTAAGGTAATAACAATTTTTAAATTTTAACTATCCTAATTGGTGTAAT
CAATAAAAAAAGTATAAAAA

Downstream 100 bases:

>100_bases
CATTTTAGATGAATGAATCGAGAATCTTTTAACTTTATCTAATTATCCGATTGAATAAGATCTTCCTCATTTCTTAAGAG
CTAATTCAGTTTTGAGATTC

Product: putative phosphoprotein phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MLELSLAAHPKGYELNKTEFCQSLLFHPYAVRHYELFRQTNKAGHLFIAFLESIPMAGVVISVIERIIVIATQLSKNHLY
STNSTNQIFLSNVIKRKKGKALAVFVETKGSNSNSTTEDSSEITLTNSELSIVNKQEENGLLLPNSQLNTPILLSEALSL
PAHTTVELKMIKNLKKAIFEHKLVEKIEDASEIAKELTRPLRTIAENVKFSVTSAAEQGFFRPTMEDAHFHLSLPDGELL
GVFDGHGENGQVAHYVSERVQKLFVERKSDSEDMIEVFKNLFKDIHQEVITKKIDCINGKLVGGSTAVVCYVCRKTLKTV
VATLGDSEVWHFRQRKALIKATPLSCVRKWSSKKDFKRINTYWQQHLGRLTLSRDFKSISLKGAGTLQPSRSIGDRQFCS
DQAFPLVSQEPIVSMIQLQQGDRLIVACDGVWNFLTKQMNQLIETVIQHTWDNEQMNIAQEIANLALSKHNDYDNDNVSV
ISLRID

Sequences:

>Translated_486_residues
MLELSLAAHPKGYELNKTEFCQSLLFHPYAVRHYELFRQTNKAGHLFIAFLESIPMAGVVISVIERIIVIATQLSKNHLY
STNSTNQIFLSNVIKRKKGKALAVFVETKGSNSNSTTEDSSEITLTNSELSIVNKQEENGLLLPNSQLNTPILLSEALSL
PAHTTVELKMIKNLKKAIFEHKLVEKIEDASEIAKELTRPLRTIAENVKFSVTSAAEQGFFRPTMEDAHFHLSLPDGELL
GVFDGHGENGQVAHYVSERVQKLFVERKSDSEDMIEVFKNLFKDIHQEVITKKIDCINGKLVGGSTAVVCYVCRKTLKTV
VATLGDSEVWHFRQRKALIKATPLSCVRKWSSKKDFKRINTYWQQHLGRLTLSRDFKSISLKGAGTLQPSRSIGDRQFCS
DQAFPLVSQEPIVSMIQLQQGDRLIVACDGVWNFLTKQMNQLIETVIQHTWDNEQMNIAQEIANLALSKHNDYDNDNVSV
ISLRID
>Mature_486_residues
MLELSLAAHPKGYELNKTEFCQSLLFHPYAVRHYELFRQTNKAGHLFIAFLESIPMAGVVISVIERIIVIATQLSKNHLY
STNSTNQIFLSNVIKRKKGKALAVFVETKGSNSNSTTEDSSEITLTNSELSIVNKQEENGLLLPNSQLNTPILLSEALSL
PAHTTVELKMIKNLKKAIFEHKLVEKIEDASEIAKELTRPLRTIAENVKFSVTSAAEQGFFRPTMEDAHFHLSLPDGELL
GVFDGHGENGQVAHYVSERVQKLFVERKSDSEDMIEVFKNLFKDIHQEVITKKIDCINGKLVGGSTAVVCYVCRKTLKTV
VATLGDSEVWHFRQRKALIKATPLSCVRKWSSKKDFKRINTYWQQHLGRLTLSRDFKSISLKGAGTLQPSRSIGDRQFCS
DQAFPLVSQEPIVSMIQLQQGDRLIVACDGVWNFLTKQMNQLIETVIQHTWDNEQMNIAQEIANLALSKHNDYDNDNVSV
ISLRID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54812; Mature: 54812

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: PS01032 PP2C

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELSLAAHPKGYELNKTEFCQSLLFHPYAVRHYELFRQTNKAGHLFIAFLESIPMAGVV
CEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHH
ISVIERIIVIATQLSKNHLYSTNSTNQIFLSNVIKRKKGKALAVFVETKGSNSNSTTEDS
HHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCC
SEITLTNSELSIVNKQEENGLLLPNSQLNTPILLSEALSLPAHTTVELKMIKNLKKAIFE
CEEEEECCCEEEEECCCCCCEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
HKLVEKIEDASEIAKELTRPLRTIAENVKFSVTSAAEQGFFRPTMEDAHFHLSLPDGELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHCCCCCCCCCCCEEEEECCCCCEE
GVFDGHGENGQVAHYVSERVQKLFVERKSDSEDMIEVFKNLFKDIHQEVITKKIDCINGK
EEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
LVGGSTAVVCYVCRKTLKTVVATLGDSEVWHFRQRKALIKATPLSCVRKWSSKKDFKRIN
EECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHH
TYWQQHLGRLTLSRDFKSISLKGAGTLQPSRSIGDRQFCSDQAFPLVSQEPIVSMIQLQQ
HHHHHHHCCHHHHCCCCEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCC
GDRLIVACDGVWNFLTKQMNQLIETVIQHTWDNEQMNIAQEIANLALSKHNDYDNDNVSV
CCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE
ISLRID
EEEEEC
>Mature Secondary Structure
MLELSLAAHPKGYELNKTEFCQSLLFHPYAVRHYELFRQTNKAGHLFIAFLESIPMAGVV
CEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHH
ISVIERIIVIATQLSKNHLYSTNSTNQIFLSNVIKRKKGKALAVFVETKGSNSNSTTEDS
HHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCC
SEITLTNSELSIVNKQEENGLLLPNSQLNTPILLSEALSLPAHTTVELKMIKNLKKAIFE
CEEEEECCCEEEEECCCCCCEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
HKLVEKIEDASEIAKELTRPLRTIAENVKFSVTSAAEQGFFRPTMEDAHFHLSLPDGELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHCCCCCCCCCCCEEEEECCCCCEE
GVFDGHGENGQVAHYVSERVQKLFVERKSDSEDMIEVFKNLFKDIHQEVITKKIDCINGK
EEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
LVGGSTAVVCYVCRKTLKTVVATLGDSEVWHFRQRKALIKATPLSCVRKWSSKKDFKRIN
EECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHH
TYWQQHLGRLTLSRDFKSISLKGAGTLQPSRSIGDRQFCSDQAFPLVSQEPIVSMIQLQQ
HHHHHHHCCHHHHCCCCEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCC
GDRLIVACDGVWNFLTKQMNQLIETVIQHTWDNEQMNIAQEIANLALSKHNDYDNDNVSV
CCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE
ISLRID
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA