Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447359
Identifier: 46447359
GI number: 46447359
Start: 2062406
End: 2062636
Strand: Reverse
Name: 46447359
Synonym: pc1725
Alternate gene names: NA
Gene position: 2062636-2062406 (Counterclockwise)
Preceding gene: 46447363
Following gene: 46447355
Centisome position: 85.43
GC content: 35.5
Gene sequence:
>231_bases TTGCCGACTATCTTCTTGCTGAAAAATTGGCTGAATTTCGATACTTTGCTTGAACATGTAAAAAAAGTAGCTAAGCAAAT TGACGGATCTAGCTGCCGAACAAATCTTGGTTCCAACTTGCCTGAGCGTAATTTACTTGGAATGGCGGCTAATTTAACCA CTCAGAAAAATTTGACCGATTTCTTTCAAATTCAAGTTATGTATTTTACGAAAAAGCTAACGAAAAATTAG
Upstream 100 bases:
>100_bases TTATTAACGATGTATTAAAAGAGAATTCAGAAGCTTTAAATGCTTAAGGCAAACTAGAAGAATTGTCCGTTAAAGCCCAC AAGCGTATGCTATAGCTTTT
Downstream 100 bases:
>100_bases AAGCTCTGCATATGGGAAGTACGGAACACACTTTTCCATAAAAAAATGTTTAAATTAATTTTAGAAGCGACTGCGCCCTG CTAATGCTCTGGCTAAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MPTIFLLKNWLNFDTLLEHVKKVAKQIDGSSCRTNLGSNLPERNLLGMAANLTTQKNLTDFFQIQVMYFTKKLTKN
Sequences:
>Translated_76_residues MPTIFLLKNWLNFDTLLEHVKKVAKQIDGSSCRTNLGSNLPERNLLGMAANLTTQKNLTDFFQIQVMYFTKKLTKN >Mature_75_residues PTIFLLKNWLNFDTLLEHVKKVAKQIDGSSCRTNLGSNLPERNLLGMAANLTTQKNLTDFFQIQVMYFTKKLTKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8747; Mature: 8616
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIFLLKNWLNFDTLLEHVKKVAKQIDGSSCRTNLGSNLPERNLLGMAANLTTQKNLTD CCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHCCCCCCCCHH FFQIQVMYFTKKLTKN HHHHHHHHHHHHHHCC >Mature Secondary Structure PTIFLLKNWLNFDTLLEHVKKVAKQIDGSSCRTNLGSNLPERNLLGMAANLTTQKNLTD CHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHCCCCCCCCHH FFQIQVMYFTKKLTKN HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA