Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447346

Identifier: 46447346

GI number: 46447346

Start: 2050531

End: 2051352

Strand: Reverse

Name: 46447346

Synonym: pc1712

Alternate gene names: NA

Gene position: 2051352-2050531 (Counterclockwise)

Preceding gene: 46447347

Following gene: 46447343

Centisome position: 84.96

GC content: 36.25

Gene sequence:

>822_bases
ATGTTTTTCAGAAAAATTTGGAAATGGTTATTTTGTGTTTATTTATTACCAATTCTAGGCTGGGCTTATGAAGATCAGCC
TTGGATAGGCAATTATCTTGAATTTGAATGGACCTCTTCTCTTCAATTTCAATGCTACAAAGATTTATCGTGTAAATCTA
ACTCAAAACCTTACCTTTCTCGCGATATTTTTCTTTATACTCAATTAGCACTTGCCGCCACTCCTCAGCTATCTTTAAAT
TTAGGAGCTATGGCTGCCCGAACAAATAAACAGGCGGGTAGTATCGATCACTTAGAATTTAACGGACGTTATATCTTTTT
GGATGATGTAATTGGAGATCCTGTGACATTAACCTTAGGAATCAACCTTGTTCATGCGTTTCCCTGGAGTCTGCGAGATC
CAAGTTCTTTTCATCATGGCAAAAACGAAGGGGAGTTGTTTATTTCTATGGGTAAAGAATGGGCAGAAAAAGATCAGTGG
TCTTCTAGGCTATGGGCTAAAGTAGGGCTTGGGAGTGCACTAAATGATTCTGCTTGGATTCGTTTAAAGATTGCTTTTGC
TCAAAGAATTAGACTTTATCACGAATTTGAAATTTTCTCGCGAACTCTTTGTGGTTTTGGGAGGCGCTCCTTAAATTTAC
GTCATTTTCATGGATATGGCTCTATTGATCATCAATCTATTGATTTAGGACTGCGATACACTTATCTTATTGATTTTGTA
GGAAATTTGTCTGTAGAATATGCAAAACGTGTTTATTCCCAAAATTTTCCATCAAAAGCAAATCAAATTCAATTGACGTT
CTTTTACCCTTTTGGATTGTAA

Upstream 100 bases:

>100_bases
AAGATTTTGAATATCGGCAAGCTATTACTGCTGCAGGTAGTGGTTGTATGGCAGCCTTGGATGCTGAAAGATGGCTCGCT
GAAAAAGGATTAGACAATTA

Downstream 100 bases:

>100_bases
ACCCTTTACGTGTAATTTTGTCTTTTTCAGATAAATAAAAAGACCCGAAGAATGAAATTCGGGATCAATTAAGAAGACCA
AACAGCAAATGCTGTTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MFFRKIWKWLFCVYLLPILGWAYEDQPWIGNYLEFEWTSSLQFQCYKDLSCKSNSKPYLSRDIFLYTQLALAATPQLSLN
LGAMAARTNKQAGSIDHLEFNGRYIFLDDVIGDPVTLTLGINLVHAFPWSLRDPSSFHHGKNEGELFISMGKEWAEKDQW
SSRLWAKVGLGSALNDSAWIRLKIAFAQRIRLYHEFEIFSRTLCGFGRRSLNLRHFHGYGSIDHQSIDLGLRYTYLIDFV
GNLSVEYAKRVYSQNFPSKANQIQLTFFYPFGL

Sequences:

>Translated_273_residues
MFFRKIWKWLFCVYLLPILGWAYEDQPWIGNYLEFEWTSSLQFQCYKDLSCKSNSKPYLSRDIFLYTQLALAATPQLSLN
LGAMAARTNKQAGSIDHLEFNGRYIFLDDVIGDPVTLTLGINLVHAFPWSLRDPSSFHHGKNEGELFISMGKEWAEKDQW
SSRLWAKVGLGSALNDSAWIRLKIAFAQRIRLYHEFEIFSRTLCGFGRRSLNLRHFHGYGSIDHQSIDLGLRYTYLIDFV
GNLSVEYAKRVYSQNFPSKANQIQLTFFYPFGL
>Mature_273_residues
MFFRKIWKWLFCVYLLPILGWAYEDQPWIGNYLEFEWTSSLQFQCYKDLSCKSNSKPYLSRDIFLYTQLALAATPQLSLN
LGAMAARTNKQAGSIDHLEFNGRYIFLDDVIGDPVTLTLGINLVHAFPWSLRDPSSFHHGKNEGELFISMGKEWAEKDQW
SSRLWAKVGLGSALNDSAWIRLKIAFAQRIRLYHEFEIFSRTLCGFGRRSLNLRHFHGYGSIDHQSIDLGLRYTYLIDFV
GNLSVEYAKRVYSQNFPSKANQIQLTFFYPFGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31748; Mature: 31748

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFRKIWKWLFCVYLLPILGWAYEDQPWIGNYLEFEWTSSLQFQCYKDLSCKSNSKPYLS
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCC
RDIFLYTQLALAATPQLSLNLGAMAARTNKQAGSIDHLEFNGRYIFLDDVIGDPVTLTLG
HHHHEEEHHHHHCCCCCEEECCHHEECCCCCCCCCCEEEECCEEEEEECCCCCCEEEEEE
INLVHAFPWSLRDPSSFHHGKNEGELFISMGKEWAEKDQWSSRLWAKVGLGSALNDSAWI
EEEEEECCCCCCCCCHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEE
RLKIAFAQRIRLYHEFEIFSRTLCGFGRRSLNLRHFHGYGSIDHQSIDLGLRYTYLIDFV
EEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCEEHEEEEHHH
GNLSVEYAKRVYSQNFPSKANQIQLTFFYPFGL
CCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure
MFFRKIWKWLFCVYLLPILGWAYEDQPWIGNYLEFEWTSSLQFQCYKDLSCKSNSKPYLS
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCC
RDIFLYTQLALAATPQLSLNLGAMAARTNKQAGSIDHLEFNGRYIFLDDVIGDPVTLTLG
HHHHEEEHHHHHCCCCCEEECCHHEECCCCCCCCCCEEEECCEEEEEECCCCCCEEEEEE
INLVHAFPWSLRDPSSFHHGKNEGELFISMGKEWAEKDQWSSRLWAKVGLGSALNDSAWI
EEEEEECCCCCCCCCHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEE
RLKIAFAQRIRLYHEFEIFSRTLCGFGRRSLNLRHFHGYGSIDHQSIDLGLRYTYLIDFV
EEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCEEHEEEEHHH
GNLSVEYAKRVYSQNFPSKANQIQLTFFYPFGL
CCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA