Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447323
Identifier: 46447323
GI number: 46447323
Start: 2025034
End: 2026809
Strand: Reverse
Name: 46447323
Synonym: pc1689
Alternate gene names: NA
Gene position: 2026809-2025034 (Counterclockwise)
Preceding gene: 46447326
Following gene: 46447322
Centisome position: 83.94
GC content: 32.43
Gene sequence:
>1776_bases ATGGTTTGGCGTTCTCTTGATTTTTATAGTTTAAATGATTTAGATCAAAAGATAGTTGACCAATTAGAACTGTATTTACA TCAAAGGGAAACAAGGCTAGCTCATCAAATTCTTAATGCTATTCCATCCACTAATCTTGAGACTTTCAGTCCTATTTTAT CCCAAGAGGGAGGAATTCTCAAACTCTCAGATGCGGTAGAAGGAATTACAAAAAAAGTGAGAACGTTTGTTAAAACCGAC ACTCAAAGAGTTGATCAAGATCAAGATCGTAAATTTCGTCAACACATTAATCATGTTTTATGGGAATTTACAGAGGTTTT AGAAGGATGCGTTGTTGAACTCTTTCAACAAATTAAACAAGTTAGGGTAGATCGATGGCATCGTTCAATTTTTAAAGCTG TTTATGCGATCAAAAATATCCTTATTCATTATATCGAAGATCTCGCTTGGGCAGTTCGCCGCTTAGAAAAGCCTCTAAAA GAATATTTTCAATATTGTAATGCAAAGTTAACTTTATTCAATCATTGGATGTTAGGTTGGCAATCTTTTGTTGATCCCCA GATCGCTAAAAACTTAAATCAAAGTGAAATTTTTTTAAAAAAAGAGTATCAAGCTTTTGAAACATGCTATCAAAACTACA TACAAATTAGTATTAAGATTGAATTTGACTTAGAAGAAATGAAAACATTTCAAGCATTTGCTCAATTAGGTATTGCGGAG CAGAATTTGTATGTGGATGTATTTCGATTGTTAAAAACACTAGAGCAAAATTCCAAACCAAAAGATTTACTTAGCCAGGA AACAATTCGATCTTTAAAAAACATTGCCAATTTCGACACTATAGAAGATGTTTTAAAAAAATATCACAAAATCCTTAAAA AAGCTTTTTTTGATAGTAGTTTAGCTTGGAAAAAATTAGATAAAGATGAGGATTCTGTTAAAGAGAAATCGGAGGAATTG AAAAATTCTGTTTATCACTACCAATATGAACTTCAACAATTATTAAAAACAATAGGACATTACCGAACTTTCCTTCTTAA AACGGATCCTGATCCATATGTGGGTTCTCGATGGGGATTTTCTGAATGGATCGTTAGTCCTGAGCCTATAAGAGCTAAAA AACTTATGCATTTAATGTATTTTTTAGATGAGCTAAATAAAGGATATGAAAAGCTTTTTAAAGCATTTGAGCGCGATAAG CTGACTTTACAACTATTGGAAAATAAAGCACATGAGGTAATTGAAAAGCTTTTACATGAAATGGAGCAGCCTTTAATTTC TCGCTCTATGATGCAAAATCGAGCTTTGCAATTAATTAGTCAATTGCAACTTTGTGATGAAATTGGAAGCGATCAACTTG AAATCATCAGTTATTTTGATGGTATCCTTGCTAAAGCAATGCGTGAAGATTGGAAATATCACGTCTTACATGGCTTTCCA GCTTTTCATGAAATTTATTGGCAGCATAAAGGATTAGGCGAGTTTACTCATGATCCAGCCCACGCCTTTCGAGTAGAGCG ATTTCAATTATTGATAGATCGAGTTGAAGGTTGGATGAAAAAAGGGGAATTCTATGTTCATACCTATGAGGTAGAGTTAG ATAAAAATGATATAAAAACTTATTTACAAGACTTTTTAGCGATTGTTCAACGAACAGAGAAAGAAAAATCGCTAGATCCA TTCCTTGATGAAACTATTGATCGCTTAAAACAGCAGTTTTTAGAATATCGATATCTATTTGGACAGTTTCTATTTAATAA TGTAAGTTGCAAATAA
Upstream 100 bases:
>100_bases ATTTGGTAAAATAAAGATAAAGGGGCATTTTTTGGGAATACTTCGCGGAATTTGCTTATATAAGGGTTGAAAAATTCAAA ATCGTGCATTAGGAGAATTT
Downstream 100 bases:
>100_bases CTAAGTTAAAATAAAATTTAGATGTAAATAAAAAGGCCTCAGATCCTTAAATTGTTTTTGTGGAACAAATAACAAGGATT GAAGCCATGGAAGAACAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MVWRSLDFYSLNDLDQKIVDQLELYLHQRETRLAHQILNAIPSTNLETFSPILSQEGGILKLSDAVEGITKKVRTFVKTD TQRVDQDQDRKFRQHINHVLWEFTEVLEGCVVELFQQIKQVRVDRWHRSIFKAVYAIKNILIHYIEDLAWAVRRLEKPLK EYFQYCNAKLTLFNHWMLGWQSFVDPQIAKNLNQSEIFLKKEYQAFETCYQNYIQISIKIEFDLEEMKTFQAFAQLGIAE QNLYVDVFRLLKTLEQNSKPKDLLSQETIRSLKNIANFDTIEDVLKKYHKILKKAFFDSSLAWKKLDKDEDSVKEKSEEL KNSVYHYQYELQQLLKTIGHYRTFLLKTDPDPYVGSRWGFSEWIVSPEPIRAKKLMHLMYFLDELNKGYEKLFKAFERDK LTLQLLENKAHEVIEKLLHEMEQPLISRSMMQNRALQLISQLQLCDEIGSDQLEIISYFDGILAKAMREDWKYHVLHGFP AFHEIYWQHKGLGEFTHDPAHAFRVERFQLLIDRVEGWMKKGEFYVHTYEVELDKNDIKTYLQDFLAIVQRTEKEKSLDP FLDETIDRLKQQFLEYRYLFGQFLFNNVSCK
Sequences:
>Translated_591_residues MVWRSLDFYSLNDLDQKIVDQLELYLHQRETRLAHQILNAIPSTNLETFSPILSQEGGILKLSDAVEGITKKVRTFVKTD TQRVDQDQDRKFRQHINHVLWEFTEVLEGCVVELFQQIKQVRVDRWHRSIFKAVYAIKNILIHYIEDLAWAVRRLEKPLK EYFQYCNAKLTLFNHWMLGWQSFVDPQIAKNLNQSEIFLKKEYQAFETCYQNYIQISIKIEFDLEEMKTFQAFAQLGIAE QNLYVDVFRLLKTLEQNSKPKDLLSQETIRSLKNIANFDTIEDVLKKYHKILKKAFFDSSLAWKKLDKDEDSVKEKSEEL KNSVYHYQYELQQLLKTIGHYRTFLLKTDPDPYVGSRWGFSEWIVSPEPIRAKKLMHLMYFLDELNKGYEKLFKAFERDK LTLQLLENKAHEVIEKLLHEMEQPLISRSMMQNRALQLISQLQLCDEIGSDQLEIISYFDGILAKAMREDWKYHVLHGFP AFHEIYWQHKGLGEFTHDPAHAFRVERFQLLIDRVEGWMKKGEFYVHTYEVELDKNDIKTYLQDFLAIVQRTEKEKSLDP FLDETIDRLKQQFLEYRYLFGQFLFNNVSCK >Mature_591_residues MVWRSLDFYSLNDLDQKIVDQLELYLHQRETRLAHQILNAIPSTNLETFSPILSQEGGILKLSDAVEGITKKVRTFVKTD TQRVDQDQDRKFRQHINHVLWEFTEVLEGCVVELFQQIKQVRVDRWHRSIFKAVYAIKNILIHYIEDLAWAVRRLEKPLK EYFQYCNAKLTLFNHWMLGWQSFVDPQIAKNLNQSEIFLKKEYQAFETCYQNYIQISIKIEFDLEEMKTFQAFAQLGIAE QNLYVDVFRLLKTLEQNSKPKDLLSQETIRSLKNIANFDTIEDVLKKYHKILKKAFFDSSLAWKKLDKDEDSVKEKSEEL KNSVYHYQYELQQLLKTIGHYRTFLLKTDPDPYVGSRWGFSEWIVSPEPIRAKKLMHLMYFLDELNKGYEKLFKAFERDK LTLQLLENKAHEVIEKLLHEMEQPLISRSMMQNRALQLISQLQLCDEIGSDQLEIISYFDGILAKAMREDWKYHVLHGFP AFHEIYWQHKGLGEFTHDPAHAFRVERFQLLIDRVEGWMKKGEFYVHTYEVELDKNDIKTYLQDFLAIVQRTEKEKSLDP FLDETIDRLKQQFLEYRYLFGQFLFNNVSCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70677; Mature: 70677
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWRSLDFYSLNDLDQKIVDQLELYLHQRETRLAHQILNAIPSTNLETFSPILSQEGGIL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEE KLSDAVEGITKKVRTFVKTDTQRVDQDQDRKFRQHINHVLWEFTEVLEGCVVELFQQIKQ EHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRVDRWHRSIFKAVYAIKNILIHYIEDLAWAVRRLEKPLKEYFQYCNAKLTLFNHWMLGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH QSFVDPQIAKNLNQSEIFLKKEYQAFETCYQNYIQISIKIEFDLEEMKTFQAFAQLGIAE HHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHCCCH QNLYVDVFRLLKTLEQNSKPKDLLSQETIRSLKNIANFDTIEDVLKKYHKILKKAFFDSS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC LAWKKLDKDEDSVKEKSEELKNSVYHYQYELQQLLKTIGHYRTFLLKTDPDPYVGSRWGF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC SEWIVSPEPIRAKKLMHLMYFLDELNKGYEKLFKAFERDKLTLQLLENKAHEVIEKLLHE HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH MEQPLISRSMMQNRALQLISQLQLCDEIGSDQLEIISYFDGILAKAMREDWKYHVLHGFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCH AFHEIYWQHKGLGEFTHDPAHAFRVERFQLLIDRVEGWMKKGEFYVHTYEVELDKNDIKT HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECHHHHHH YLQDFLAIVQRTEKEKSLDPFLDETIDRLKQQFLEYRYLFGQFLFNNVSCK HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVWRSLDFYSLNDLDQKIVDQLELYLHQRETRLAHQILNAIPSTNLETFSPILSQEGGIL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEE KLSDAVEGITKKVRTFVKTDTQRVDQDQDRKFRQHINHVLWEFTEVLEGCVVELFQQIKQ EHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRVDRWHRSIFKAVYAIKNILIHYIEDLAWAVRRLEKPLKEYFQYCNAKLTLFNHWMLGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH QSFVDPQIAKNLNQSEIFLKKEYQAFETCYQNYIQISIKIEFDLEEMKTFQAFAQLGIAE HHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHCCCH QNLYVDVFRLLKTLEQNSKPKDLLSQETIRSLKNIANFDTIEDVLKKYHKILKKAFFDSS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC LAWKKLDKDEDSVKEKSEELKNSVYHYQYELQQLLKTIGHYRTFLLKTDPDPYVGSRWGF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC SEWIVSPEPIRAKKLMHLMYFLDELNKGYEKLFKAFERDKLTLQLLENKAHEVIEKLLHE HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH MEQPLISRSMMQNRALQLISQLQLCDEIGSDQLEIISYFDGILAKAMREDWKYHVLHGFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCH AFHEIYWQHKGLGEFTHDPAHAFRVERFQLLIDRVEGWMKKGEFYVHTYEVELDKNDIKT HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECHHHHHH YLQDFLAIVQRTEKEKSLDPFLDETIDRLKQQFLEYRYLFGQFLFNNVSCK HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA