Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447323

Identifier: 46447323

GI number: 46447323

Start: 2025034

End: 2026809

Strand: Reverse

Name: 46447323

Synonym: pc1689

Alternate gene names: NA

Gene position: 2026809-2025034 (Counterclockwise)

Preceding gene: 46447326

Following gene: 46447322

Centisome position: 83.94

GC content: 32.43

Gene sequence:

>1776_bases
ATGGTTTGGCGTTCTCTTGATTTTTATAGTTTAAATGATTTAGATCAAAAGATAGTTGACCAATTAGAACTGTATTTACA
TCAAAGGGAAACAAGGCTAGCTCATCAAATTCTTAATGCTATTCCATCCACTAATCTTGAGACTTTCAGTCCTATTTTAT
CCCAAGAGGGAGGAATTCTCAAACTCTCAGATGCGGTAGAAGGAATTACAAAAAAAGTGAGAACGTTTGTTAAAACCGAC
ACTCAAAGAGTTGATCAAGATCAAGATCGTAAATTTCGTCAACACATTAATCATGTTTTATGGGAATTTACAGAGGTTTT
AGAAGGATGCGTTGTTGAACTCTTTCAACAAATTAAACAAGTTAGGGTAGATCGATGGCATCGTTCAATTTTTAAAGCTG
TTTATGCGATCAAAAATATCCTTATTCATTATATCGAAGATCTCGCTTGGGCAGTTCGCCGCTTAGAAAAGCCTCTAAAA
GAATATTTTCAATATTGTAATGCAAAGTTAACTTTATTCAATCATTGGATGTTAGGTTGGCAATCTTTTGTTGATCCCCA
GATCGCTAAAAACTTAAATCAAAGTGAAATTTTTTTAAAAAAAGAGTATCAAGCTTTTGAAACATGCTATCAAAACTACA
TACAAATTAGTATTAAGATTGAATTTGACTTAGAAGAAATGAAAACATTTCAAGCATTTGCTCAATTAGGTATTGCGGAG
CAGAATTTGTATGTGGATGTATTTCGATTGTTAAAAACACTAGAGCAAAATTCCAAACCAAAAGATTTACTTAGCCAGGA
AACAATTCGATCTTTAAAAAACATTGCCAATTTCGACACTATAGAAGATGTTTTAAAAAAATATCACAAAATCCTTAAAA
AAGCTTTTTTTGATAGTAGTTTAGCTTGGAAAAAATTAGATAAAGATGAGGATTCTGTTAAAGAGAAATCGGAGGAATTG
AAAAATTCTGTTTATCACTACCAATATGAACTTCAACAATTATTAAAAACAATAGGACATTACCGAACTTTCCTTCTTAA
AACGGATCCTGATCCATATGTGGGTTCTCGATGGGGATTTTCTGAATGGATCGTTAGTCCTGAGCCTATAAGAGCTAAAA
AACTTATGCATTTAATGTATTTTTTAGATGAGCTAAATAAAGGATATGAAAAGCTTTTTAAAGCATTTGAGCGCGATAAG
CTGACTTTACAACTATTGGAAAATAAAGCACATGAGGTAATTGAAAAGCTTTTACATGAAATGGAGCAGCCTTTAATTTC
TCGCTCTATGATGCAAAATCGAGCTTTGCAATTAATTAGTCAATTGCAACTTTGTGATGAAATTGGAAGCGATCAACTTG
AAATCATCAGTTATTTTGATGGTATCCTTGCTAAAGCAATGCGTGAAGATTGGAAATATCACGTCTTACATGGCTTTCCA
GCTTTTCATGAAATTTATTGGCAGCATAAAGGATTAGGCGAGTTTACTCATGATCCAGCCCACGCCTTTCGAGTAGAGCG
ATTTCAATTATTGATAGATCGAGTTGAAGGTTGGATGAAAAAAGGGGAATTCTATGTTCATACCTATGAGGTAGAGTTAG
ATAAAAATGATATAAAAACTTATTTACAAGACTTTTTAGCGATTGTTCAACGAACAGAGAAAGAAAAATCGCTAGATCCA
TTCCTTGATGAAACTATTGATCGCTTAAAACAGCAGTTTTTAGAATATCGATATCTATTTGGACAGTTTCTATTTAATAA
TGTAAGTTGCAAATAA

Upstream 100 bases:

>100_bases
ATTTGGTAAAATAAAGATAAAGGGGCATTTTTTGGGAATACTTCGCGGAATTTGCTTATATAAGGGTTGAAAAATTCAAA
ATCGTGCATTAGGAGAATTT

Downstream 100 bases:

>100_bases
CTAAGTTAAAATAAAATTTAGATGTAAATAAAAAGGCCTCAGATCCTTAAATTGTTTTTGTGGAACAAATAACAAGGATT
GAAGCCATGGAAGAACAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MVWRSLDFYSLNDLDQKIVDQLELYLHQRETRLAHQILNAIPSTNLETFSPILSQEGGILKLSDAVEGITKKVRTFVKTD
TQRVDQDQDRKFRQHINHVLWEFTEVLEGCVVELFQQIKQVRVDRWHRSIFKAVYAIKNILIHYIEDLAWAVRRLEKPLK
EYFQYCNAKLTLFNHWMLGWQSFVDPQIAKNLNQSEIFLKKEYQAFETCYQNYIQISIKIEFDLEEMKTFQAFAQLGIAE
QNLYVDVFRLLKTLEQNSKPKDLLSQETIRSLKNIANFDTIEDVLKKYHKILKKAFFDSSLAWKKLDKDEDSVKEKSEEL
KNSVYHYQYELQQLLKTIGHYRTFLLKTDPDPYVGSRWGFSEWIVSPEPIRAKKLMHLMYFLDELNKGYEKLFKAFERDK
LTLQLLENKAHEVIEKLLHEMEQPLISRSMMQNRALQLISQLQLCDEIGSDQLEIISYFDGILAKAMREDWKYHVLHGFP
AFHEIYWQHKGLGEFTHDPAHAFRVERFQLLIDRVEGWMKKGEFYVHTYEVELDKNDIKTYLQDFLAIVQRTEKEKSLDP
FLDETIDRLKQQFLEYRYLFGQFLFNNVSCK

Sequences:

>Translated_591_residues
MVWRSLDFYSLNDLDQKIVDQLELYLHQRETRLAHQILNAIPSTNLETFSPILSQEGGILKLSDAVEGITKKVRTFVKTD
TQRVDQDQDRKFRQHINHVLWEFTEVLEGCVVELFQQIKQVRVDRWHRSIFKAVYAIKNILIHYIEDLAWAVRRLEKPLK
EYFQYCNAKLTLFNHWMLGWQSFVDPQIAKNLNQSEIFLKKEYQAFETCYQNYIQISIKIEFDLEEMKTFQAFAQLGIAE
QNLYVDVFRLLKTLEQNSKPKDLLSQETIRSLKNIANFDTIEDVLKKYHKILKKAFFDSSLAWKKLDKDEDSVKEKSEEL
KNSVYHYQYELQQLLKTIGHYRTFLLKTDPDPYVGSRWGFSEWIVSPEPIRAKKLMHLMYFLDELNKGYEKLFKAFERDK
LTLQLLENKAHEVIEKLLHEMEQPLISRSMMQNRALQLISQLQLCDEIGSDQLEIISYFDGILAKAMREDWKYHVLHGFP
AFHEIYWQHKGLGEFTHDPAHAFRVERFQLLIDRVEGWMKKGEFYVHTYEVELDKNDIKTYLQDFLAIVQRTEKEKSLDP
FLDETIDRLKQQFLEYRYLFGQFLFNNVSCK
>Mature_591_residues
MVWRSLDFYSLNDLDQKIVDQLELYLHQRETRLAHQILNAIPSTNLETFSPILSQEGGILKLSDAVEGITKKVRTFVKTD
TQRVDQDQDRKFRQHINHVLWEFTEVLEGCVVELFQQIKQVRVDRWHRSIFKAVYAIKNILIHYIEDLAWAVRRLEKPLK
EYFQYCNAKLTLFNHWMLGWQSFVDPQIAKNLNQSEIFLKKEYQAFETCYQNYIQISIKIEFDLEEMKTFQAFAQLGIAE
QNLYVDVFRLLKTLEQNSKPKDLLSQETIRSLKNIANFDTIEDVLKKYHKILKKAFFDSSLAWKKLDKDEDSVKEKSEEL
KNSVYHYQYELQQLLKTIGHYRTFLLKTDPDPYVGSRWGFSEWIVSPEPIRAKKLMHLMYFLDELNKGYEKLFKAFERDK
LTLQLLENKAHEVIEKLLHEMEQPLISRSMMQNRALQLISQLQLCDEIGSDQLEIISYFDGILAKAMREDWKYHVLHGFP
AFHEIYWQHKGLGEFTHDPAHAFRVERFQLLIDRVEGWMKKGEFYVHTYEVELDKNDIKTYLQDFLAIVQRTEKEKSLDP
FLDETIDRLKQQFLEYRYLFGQFLFNNVSCK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70677; Mature: 70677

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWRSLDFYSLNDLDQKIVDQLELYLHQRETRLAHQILNAIPSTNLETFSPILSQEGGIL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEE
KLSDAVEGITKKVRTFVKTDTQRVDQDQDRKFRQHINHVLWEFTEVLEGCVVELFQQIKQ
EHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRVDRWHRSIFKAVYAIKNILIHYIEDLAWAVRRLEKPLKEYFQYCNAKLTLFNHWMLGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
QSFVDPQIAKNLNQSEIFLKKEYQAFETCYQNYIQISIKIEFDLEEMKTFQAFAQLGIAE
HHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHCCCH
QNLYVDVFRLLKTLEQNSKPKDLLSQETIRSLKNIANFDTIEDVLKKYHKILKKAFFDSS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
LAWKKLDKDEDSVKEKSEELKNSVYHYQYELQQLLKTIGHYRTFLLKTDPDPYVGSRWGF
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC
SEWIVSPEPIRAKKLMHLMYFLDELNKGYEKLFKAFERDKLTLQLLENKAHEVIEKLLHE
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
MEQPLISRSMMQNRALQLISQLQLCDEIGSDQLEIISYFDGILAKAMREDWKYHVLHGFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCH
AFHEIYWQHKGLGEFTHDPAHAFRVERFQLLIDRVEGWMKKGEFYVHTYEVELDKNDIKT
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECHHHHHH
YLQDFLAIVQRTEKEKSLDPFLDETIDRLKQQFLEYRYLFGQFLFNNVSCK
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA