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The map label for this gene is 46447322

Identifier: 46447322

GI number: 46447322

Start: 2024120

End: 2024947

Strand: Reverse

Name: 46447322

Synonym: pc1688

Alternate gene names: NA

Gene position: 2024947-2024120 (Counterclockwise)

Preceding gene: 46447323

Following gene: 229221136

Centisome position: 83.87

GC content: 32.73

Gene sequence:

>828_bases
ATGGAAGAACAAATTATAGCACTTTATTGCCTTTTAGACGACTACATCCTTTCGATTGGATACAAAGATTGGCCAAATAC
AAAACTGTCTACTTCGGAAATTATGTTGATAAATTTAGTAGGAATGAGATTTTTTTACGGAAATATGGAAACGTCCCGAA
AATTTCTTATTGAGCATAGATATATCATGAATAAACTGAGTAAGAGCGCATTAAATAGAAGAATTCATCAAATACCCATG
AAATGGTGGGAGGAAATTCTTGAGTTTATTCAAAAATTAAAAAACTTTGGAAAATTACCTTTTGAATATATTGTTGATGC
ATTTCCTGTTTCTGTTTGTAGAAATATAAGAATTCAAAATTGTAGAATTTATCGAGGAGAGGAATTTAGAGGGTATAATG
CTAGTAAGCGAGAATATTTTTATGGATTGAAAGTAACAGTCTTAGCTTCTCAAGATGGGTGCCCTTTTAGAGTTATCCTT
TGTCCAGGCAGAGAGCATGATGCTGTTCCTTTTAAATACATGGAACGAAACTTACCCGCAGGCAGTAAGATTTATGGAGA
TTCTGCCTATGTCGATTATAAGCATCAAGACATGCTTGAAAAGATAGAAAACATCAAGCTCATAGTGGAGCCAAAATCTA
ATTCTCTTCGTTCAATCGATTTACATGATTTTGTAAATTTGAAGCACATTAGAAAATTTATTGAGGGAGTATTTGGCGTG
ATATCAAGACTGATGCCTAGAAAAATTCATGCAACGACGTCTAATGGGTTTGAAATTAAAGTTTTAGGATTTCTAGTAGC
AGCTGCAACAAATTTTTTAATAAATTAG

Upstream 100 bases:

>100_bases
TAAGTTGCAAATAACTAAGTTAAAATAAAATTTAGATGTAAATAAAAAGGCCTCAGATCCTTAAATTGTTTTTGTGGAAC
AAATAACAAGGATTGAAGCC

Downstream 100 bases:

>100_bases
TTATTTGCAACTTACATTTAATATACAAATTAAGGATATAGATGGCCAATATCGCAATAAATTTCTTTTTATAGAACAAT
ATTTTGAATCGATTGAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MEEQIIALYCLLDDYILSIGYKDWPNTKLSTSEIMLINLVGMRFFYGNMETSRKFLIEHRYIMNKLSKSALNRRIHQIPM
KWWEEILEFIQKLKNFGKLPFEYIVDAFPVSVCRNIRIQNCRIYRGEEFRGYNASKREYFYGLKVTVLASQDGCPFRVIL
CPGREHDAVPFKYMERNLPAGSKIYGDSAYVDYKHQDMLEKIENIKLIVEPKSNSLRSIDLHDFVNLKHIRKFIEGVFGV
ISRLMPRKIHATTSNGFEIKVLGFLVAAATNFLIN

Sequences:

>Translated_275_residues
MEEQIIALYCLLDDYILSIGYKDWPNTKLSTSEIMLINLVGMRFFYGNMETSRKFLIEHRYIMNKLSKSALNRRIHQIPM
KWWEEILEFIQKLKNFGKLPFEYIVDAFPVSVCRNIRIQNCRIYRGEEFRGYNASKREYFYGLKVTVLASQDGCPFRVIL
CPGREHDAVPFKYMERNLPAGSKIYGDSAYVDYKHQDMLEKIENIKLIVEPKSNSLRSIDLHDFVNLKHIRKFIEGVFGV
ISRLMPRKIHATTSNGFEIKVLGFLVAAATNFLIN
>Mature_275_residues
MEEQIIALYCLLDDYILSIGYKDWPNTKLSTSEIMLINLVGMRFFYGNMETSRKFLIEHRYIMNKLSKSALNRRIHQIPM
KWWEEILEFIQKLKNFGKLPFEYIVDAFPVSVCRNIRIQNCRIYRGEEFRGYNASKREYFYGLKVTVLASQDGCPFRVIL
CPGREHDAVPFKYMERNLPAGSKIYGDSAYVDYKHQDMLEKIENIKLIVEPKSNSLRSIDLHDFVNLKHIRKFIEGVFGV
ISRLMPRKIHATTSNGFEIKVLGFLVAAATNFLIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32215; Mature: 32215

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEQIIALYCLLDDYILSIGYKDWPNTKLSTSEIMLINLVGMRFFYGNMETSRKFLIEHR
CCCHHEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHH
YIMNKLSKSALNRRIHQIPMKWWEEILEFIQKLKNFGKLPFEYIVDAFPVSVCRNIRIQN
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEECE
CRIYRGEEFRGYNASKREYFYGLKVTVLASQDGCPFRVILCPGREHDAVPFKYMERNLPA
EEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHCCCCC
GSKIYGDSAYVDYKHQDMLEKIENIKLIVEPKSNSLRSIDLHDFVNLKHIRKFIEGVFGV
CCEECCCCEEECCHHHHHHHHHCCCEEEEECCCCCEEEECHHHHHCHHHHHHHHHHHHHH
ISRLMPRKIHATTSNGFEIKVLGFLVAAATNFLIN
HHHHCCCEEEEECCCCCEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEEQIIALYCLLDDYILSIGYKDWPNTKLSTSEIMLINLVGMRFFYGNMETSRKFLIEHR
CCCHHEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHH
YIMNKLSKSALNRRIHQIPMKWWEEILEFIQKLKNFGKLPFEYIVDAFPVSVCRNIRIQN
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEECE
CRIYRGEEFRGYNASKREYFYGLKVTVLASQDGCPFRVILCPGREHDAVPFKYMERNLPA
EEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHCCCCC
GSKIYGDSAYVDYKHQDMLEKIENIKLIVEPKSNSLRSIDLHDFVNLKHIRKFIEGVFGV
CCEECCCCEEECCHHHHHHHHHCCCEEEEECCCCCEEEECHHHHHCHHHHHHHHHHHHHH
ISRLMPRKIHATTSNGFEIKVLGFLVAAATNFLIN
HHHHCCCEEEEECCCCCEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA