Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
---|---|
Accession | NC_005861 |
Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is pyk [H]
Identifier: 46447270
GI number: 46447270
Start: 1956411
End: 1958207
Strand: Reverse
Name: pyk [H]
Synonym: pc1636
Alternate gene names: 46447270
Gene position: 1958207-1956411 (Counterclockwise)
Preceding gene: 46447272
Following gene: 46447269
Centisome position: 81.1
GC content: 37.28
Gene sequence:
>1797_bases ATGGCATTAATTAGAACAAAAATTGTTTGTACAATAGGACCTGCTTGCAATTCCTTAGAGAAAATTATTGAGTTAATAAA CGTAGGAATGAACGTTGCAAGGTTGAATTTTAGTCATGGAACTCAAGAAGAACATTTAAGGACAATTAATCTTTTAAAAG AAGCGAGATGTCAACTTAACTTACCTTTAGCCATCATGTTAGATACAAAAGGGCCAGAAATACGGCTAGGAAAAATTCGA GATGGACAAATTTTTTTAACGGTAGGTCAAAAATGGCGGTTAGTGAAAAAGGAGGTTTTAGGAGATGAAAGTCAGGTTTC TATTTTTCCTCTCAATATTTTAGATCAACTTCCTGTTGGGACAACAATTTTATTTGATGATGGGTATATTGCCTCACGCG TGATTGAAAATTCATCCGAAGGTGTGCTTGTTGAAATTAATAACAGCGGGATGATTCGTTCAAGTAAAGGAGTTAATATT CCCAATACAAGCCTAAATTTGCCTGCTGTCACCGAAAAAGACATTGACGATATTCGTTTTGGATGTAGCCAGGATATTGA CTTGATTGCTGCTTCCTTTGTTCGTTCTGCAGAACATGTCTTGGAGATTAAGCGTTTATTAGCTGATGAAAAAAAAACTG ATATTCTAGTTATTGCAAAAATTGAAAATAGTGAAGGGGTGCAAAATTTTGATAGCATTGTCCAAGCAGCAGACGGAATC ATGATAGCAAGAGGAGATTTAGGGGTTGAAGTTCCTTTAAGCCATGTTCCTAGATTGCAGAAAATGATGATCCGTAAAAG TTATTTGGCAGGCAAGCCAGTTGTGACAGCAACGCAGATGTTAGAATCAATGATCAATAATCCTAGACCAACTCGTGCAG AAACATCTGATGTAGCAAATGCGATTTATGATAGTACATCTGCTATCATGCTTTCAGGAGAAACAGCAATTGGTCGTTAT CCTGTTGAGACGGTTAATGTGATGCGAAGTATCGTAGAAGAGGCTGAAGCTGATTTCAACTACAGTACTTTTTTTGATCA ACATGCCCCTTTAGTTTATCATGATGTTCCCTCTGCTGTGACTTTAGCTACTGTAAAAACAGCTTACAGTTCTAGCGCTA AAGCTATTTTTGCTTTTACTAAAGCAGGAACAACGGCACGACTTTTATCAAGACTTAGGCCTAAAATGCCTATTATTGCG ATGACAGCAAAAGAAAAAATTTTTCATCAGTTGGCATTTAATTGGGGAGTTATTCCTTTTTTAAGTGAACCTTGTAACTC TTTAGATAAAAGTTTAAAAAAAATCAGTGATTTCGCCCTTGGAAGTCAACACGTCAGCTATGGAGATTTGGTTGTGATTA CTGCAGGAACTCCTTTTGGATTTTCAGGAACGACCAATATGATGATCGTTGAAAATATTGGAGATGTTTTGGTAAGAGGG CACTCTGGATATGGTATACGTGTGCATGGGAACGTAGTAATAGTTCTTGCTCCTCAGTCTAAAGCTCCTTATGCGGTCAA AGATCAGGTACTTGTGATTGCCAAATGCGATGAGAGTTATTTATCTTTAATGAAGGAAGCTTCTGCTATTATTTTACAGA ACCATATCAATGATTTTGCGTCTGAAAAATACGCGAAGAAGATTGCTCTGAGTTTAGGTAAGCCTATTCTTCTTCGAGCT GATGCGGCATGTCAAATTTTAAAAGAAGGACAGCTTGTTACTCTCGATCCTGAAAAAGCCCTTGTTTACAAAGGAGTTGT TTTGGACCAATTGTTGGCGAGTGGAGAATTTTCATGA
Upstream 100 bases:
>100_bases GACTTTTAAAGTTTTAGCAATAATTAAGTTACATTTGTCAAAATAGTCCCTAGTGATTAAATTAAATCAAAGCACGTTCA AATAGAAACTCAGGAAAAAT
Downstream 100 bases:
>100_bases GTGCTGTCCAAGCATTCCCTTTTCATCTATTTTCTTATATTTCGCCATTTTACTATCAAAATTATGTTGTAAACAGCAAC CAACAAACTTTTGTTTTTCA
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 598; Mature: 597
Protein sequence:
>598_residues MALIRTKIVCTIGPACNSLEKIIELINVGMNVARLNFSHGTQEEHLRTINLLKEARCQLNLPLAIMLDTKGPEIRLGKIR DGQIFLTVGQKWRLVKKEVLGDESQVSIFPLNILDQLPVGTTILFDDGYIASRVIENSSEGVLVEINNSGMIRSSKGVNI PNTSLNLPAVTEKDIDDIRFGCSQDIDLIAASFVRSAEHVLEIKRLLADEKKTDILVIAKIENSEGVQNFDSIVQAADGI MIARGDLGVEVPLSHVPRLQKMMIRKSYLAGKPVVTATQMLESMINNPRPTRAETSDVANAIYDSTSAIMLSGETAIGRY PVETVNVMRSIVEEAEADFNYSTFFDQHAPLVYHDVPSAVTLATVKTAYSSSAKAIFAFTKAGTTARLLSRLRPKMPIIA MTAKEKIFHQLAFNWGVIPFLSEPCNSLDKSLKKISDFALGSQHVSYGDLVVITAGTPFGFSGTTNMMIVENIGDVLVRG HSGYGIRVHGNVVIVLAPQSKAPYAVKDQVLVIAKCDESYLSLMKEASAIILQNHINDFASEKYAKKIALSLGKPILLRA DAACQILKEGQLVTLDPEKALVYKGVVLDQLLASGEFS
Sequences:
>Translated_598_residues MALIRTKIVCTIGPACNSLEKIIELINVGMNVARLNFSHGTQEEHLRTINLLKEARCQLNLPLAIMLDTKGPEIRLGKIR DGQIFLTVGQKWRLVKKEVLGDESQVSIFPLNILDQLPVGTTILFDDGYIASRVIENSSEGVLVEINNSGMIRSSKGVNI PNTSLNLPAVTEKDIDDIRFGCSQDIDLIAASFVRSAEHVLEIKRLLADEKKTDILVIAKIENSEGVQNFDSIVQAADGI MIARGDLGVEVPLSHVPRLQKMMIRKSYLAGKPVVTATQMLESMINNPRPTRAETSDVANAIYDSTSAIMLSGETAIGRY PVETVNVMRSIVEEAEADFNYSTFFDQHAPLVYHDVPSAVTLATVKTAYSSSAKAIFAFTKAGTTARLLSRLRPKMPIIA MTAKEKIFHQLAFNWGVIPFLSEPCNSLDKSLKKISDFALGSQHVSYGDLVVITAGTPFGFSGTTNMMIVENIGDVLVRG HSGYGIRVHGNVVIVLAPQSKAPYAVKDQVLVIAKCDESYLSLMKEASAIILQNHINDFASEKYAKKIALSLGKPILLRA DAACQILKEGQLVTLDPEKALVYKGVVLDQLLASGEFS >Mature_597_residues ALIRTKIVCTIGPACNSLEKIIELINVGMNVARLNFSHGTQEEHLRTINLLKEARCQLNLPLAIMLDTKGPEIRLGKIRD GQIFLTVGQKWRLVKKEVLGDESQVSIFPLNILDQLPVGTTILFDDGYIASRVIENSSEGVLVEINNSGMIRSSKGVNIP NTSLNLPAVTEKDIDDIRFGCSQDIDLIAASFVRSAEHVLEIKRLLADEKKTDILVIAKIENSEGVQNFDSIVQAADGIM IARGDLGVEVPLSHVPRLQKMMIRKSYLAGKPVVTATQMLESMINNPRPTRAETSDVANAIYDSTSAIMLSGETAIGRYP VETVNVMRSIVEEAEADFNYSTFFDQHAPLVYHDVPSAVTLATVKTAYSSSAKAIFAFTKAGTTARLLSRLRPKMPIIAM TAKEKIFHQLAFNWGVIPFLSEPCNSLDKSLKKISDFALGSQHVSYGDLVVITAGTPFGFSGTTNMMIVENIGDVLVRGH SGYGIRVHGNVVIVLAPQSKAPYAVKDQVLVIAKCDESYLSLMKEASAIILQNHINDFASEKYAKKIALSLGKPILLRAD AACQILKEGQLVTLDPEKALVYKGVVLDQLLASGEFS
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=485, Percent_Identity=41.8556701030928, Blast_Score=357, Evalue=1e-98, Organism=Homo sapiens, GI33286420, Length=485, Percent_Identity=41.8556701030928, Blast_Score=357, Evalue=1e-98, Organism=Homo sapiens, GI10835121, Length=494, Percent_Identity=42.1052631578947, Blast_Score=355, Evalue=7e-98, Organism=Homo sapiens, GI33286418, Length=485, Percent_Identity=41.8556701030928, Blast_Score=355, Evalue=7e-98, Organism=Homo sapiens, GI32967597, Length=494, Percent_Identity=42.1052631578947, Blast_Score=355, Evalue=9e-98, Organism=Homo sapiens, GI310128732, Length=286, Percent_Identity=45.1048951048951, Blast_Score=236, Evalue=6e-62, Organism=Homo sapiens, GI310128730, Length=286, Percent_Identity=45.1048951048951, Blast_Score=236, Evalue=6e-62, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=42.5531914893617, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=42.5531914893617, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI310128738, Length=216, Percent_Identity=41.2037037037037, Blast_Score=157, Evalue=2e-38, Organism=Escherichia coli, GI1787965, Length=466, Percent_Identity=43.7768240343348, Blast_Score=362, Evalue=1e-101, Organism=Escherichia coli, GI1788160, Length=485, Percent_Identity=36.0824742268041, Blast_Score=271, Evalue=1e-73, Organism=Caenorhabditis elegans, GI17544584, Length=483, Percent_Identity=42.8571428571429, Blast_Score=357, Evalue=7e-99, Organism=Caenorhabditis elegans, GI17506829, Length=488, Percent_Identity=41.1885245901639, Blast_Score=314, Evalue=1e-85, Organism=Caenorhabditis elegans, GI71984413, Length=488, Percent_Identity=41.1885245901639, Blast_Score=314, Evalue=1e-85, Organism=Caenorhabditis elegans, GI71984406, Length=485, Percent_Identity=41.0309278350515, Blast_Score=313, Evalue=1e-85, Organism=Caenorhabditis elegans, GI17506831, Length=485, Percent_Identity=41.0309278350515, Blast_Score=312, Evalue=3e-85, Organism=Saccharomyces cerevisiae, GI6324923, Length=486, Percent_Identity=40.3292181069959, Blast_Score=314, Evalue=3e-86, Organism=Saccharomyces cerevisiae, GI6319279, Length=434, Percent_Identity=41.2442396313364, Blast_Score=304, Evalue=2e-83, Organism=Drosophila melanogaster, GI24648964, Length=489, Percent_Identity=40.6952965235174, Blast_Score=325, Evalue=8e-89, Organism=Drosophila melanogaster, GI28571814, Length=490, Percent_Identity=40.8163265306122, Blast_Score=323, Evalue=2e-88, Organism=Drosophila melanogaster, GI24648966, Length=411, Percent_Identity=42.0924574209246, Blast_Score=302, Evalue=4e-82, Organism=Drosophila melanogaster, GI24581235, Length=480, Percent_Identity=34.1666666666667, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24646914, Length=311, Percent_Identity=36.6559485530547, Blast_Score=186, Evalue=5e-47,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 65282; Mature: 65150
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIRTKIVCTIGPACNSLEKIIELINVGMNVARLNFSHGTQEEHLRTINLLKEARCQLN CCEEEEEEEEEECHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEC LPLAIMLDTKGPEIRLGKIRDGQIFLTVGQKWRLVKKEVLGDESQVSIFPLNILDQLPVG CCEEEEEECCCCCEEEEEEECCEEEEEECCCHHHHHHHHCCCCCCEEEEEHHHHHCCCCC TTILFDDGYIASRVIENSSEGVLVEINNSGMIRSSKGVNIPNTSLNLPAVTEKDIDDIRF EEEEEECCHHHHHHHCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHC GCSQDIDLIAASFVRSAEHVLEIKRLLADEKKTDILVIAKIENSEGVQNFDSIVQAADGI CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCE MIARGDLGVEVPLSHVPRLQKMMIRKSYLAGKPVVTATQMLESMINNPRPTRAETSDVAN EEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH AIYDSTSAIMLSGETAIGRYPVETVNVMRSIVEEAEADFNYSTFFDQHAPLVYHDVPSAV HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEECCCCCE TLATVKTAYSSSAKAIFAFTKAGTTARLLSRLRPKMPIIAMTAKEKIFHQLAFNWGVIPF EHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCHH LSEPCNSLDKSLKKISDFALGSQHVSYGDLVVITAGTPFGFSGTTNMMIVENIGDVLVRG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCEEEEC HSGYGIRVHGNVVIVLAPQSKAPYAVKDQVLVIAKCDESYLSLMKEASAIILQNHINDFA CCCCEEEEECCEEEEEECCCCCCCEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH SEKYAKKIALSLGKPILLRADAACQILKEGQLVTLDPEKALVYKGVVLDQLLASGEFS HHHHHHHHHHHCCCCEEEECHHHHHHHHCCCEEEECCCHHEEEHHHHHHHHHHCCCCC >Mature Secondary Structure ALIRTKIVCTIGPACNSLEKIIELINVGMNVARLNFSHGTQEEHLRTINLLKEARCQLN CEEEEEEEEEECHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEC LPLAIMLDTKGPEIRLGKIRDGQIFLTVGQKWRLVKKEVLGDESQVSIFPLNILDQLPVG CCEEEEEECCCCCEEEEEEECCEEEEEECCCHHHHHHHHCCCCCCEEEEEHHHHHCCCCC TTILFDDGYIASRVIENSSEGVLVEINNSGMIRSSKGVNIPNTSLNLPAVTEKDIDDIRF EEEEEECCHHHHHHHCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHC GCSQDIDLIAASFVRSAEHVLEIKRLLADEKKTDILVIAKIENSEGVQNFDSIVQAADGI CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCE MIARGDLGVEVPLSHVPRLQKMMIRKSYLAGKPVVTATQMLESMINNPRPTRAETSDVAN EEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH AIYDSTSAIMLSGETAIGRYPVETVNVMRSIVEEAEADFNYSTFFDQHAPLVYHDVPSAV HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEECCCCCE TLATVKTAYSSSAKAIFAFTKAGTTARLLSRLRPKMPIIAMTAKEKIFHQLAFNWGVIPF EHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCHH LSEPCNSLDKSLKKISDFALGSQHVSYGDLVVITAGTPFGFSGTTNMMIVENIGDVLVRG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCEEEEC HSGYGIRVHGNVVIVLAPQSKAPYAVKDQVLVIAKCDESYLSLMKEASAIILQNHINDFA CCCCEEEEECCEEEEEECCCCCCCEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH SEKYAKKIALSLGKPILLRADAACQILKEGQLVTLDPEKALVYKGVVLDQLLASGEFS HHHHHHHHHHHCCCCEEEECHHHHHHHHCCCEEEECCCHHEEEHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7549104 [H]