Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447269

Identifier: 46447269

GI number: 46447269

Start: 1953622

End: 1956414

Strand: Reverse

Name: 46447269

Synonym: pc1635

Alternate gene names: NA

Gene position: 1956414-1953622 (Counterclockwise)

Preceding gene: 46447270

Following gene: 46447265

Centisome position: 81.03

GC content: 29.29

Gene sequence:

>2793_bases
ATGAGTGCTGTCCAAGCATTCCCTTTTCATCTATTTTCTTATATTTCGCCATTTTACTATCAAAATTATGTTGTAAACAG
CAACCAACAAACTTTTGTTTTTCATCGAAAATTTATTCCTATTATACAAAAATTTTTAGAATTTGGAACTTATAATGATA
TACATCGAACAGGCATTGGCTTATCTCATTCAGTCTCTTTGCAAACAGATTTAAATAATGTCCTGCAGTTTTATGCTTTA
GGGCATTTGCCTCAATCAATTTTGGAAGATTTAAAAACACGTCAAAAAAAACAAATTCGCCAACTTGAAGAAATATCGCA
GCATTATGCTCTTAATTTATTGAGCTCCATCCTTTCTGTTAGCCAGATAGATCCAAATTTGGAGTCAGAAAACTCTTTAG
CATTTTTTGATCAACTTGAATTATGTGCGCTAAGAAATAATCCTGAGAAATTTATTAAATTATTAAGCGAAAAGTCGTTA
GATTTGCAGCATGAAAGCTTGCTTGATCAAATTTATCAAATGTTGAAATTTTTTGATAAAGATGCTTTTGTTAAAGTGGT
TACTGCTTTCAAAAAAGAGCTCTTTGTCTGCGATTATCAAAGAGCTTTAAGCATTTATTTGGAAGCTAATCCAGATCAAT
TGGACGAATTAATTTATGCTGTGCAAGAATCGGAATTTAAAATTGAATTGATAAGTTTAATTGACGATCTTGTTGTTCGG
TTAATGTTTTTTGAACAATTTCCATTAAAACTTTCTTCAAAGTTAGTTCAACAAAAACTTATCAAACCACTTTTCGAAGA
AGAAACATACGAAAAAATATATCCCTATGCTCATCAATACCAATCAGCTATTTTAGAAAGTTTTGCAGCAAGGGTATCGC
CTAGTCCAAAACTATTTTTAAAAAAACATTTAGAATCTATTTTCCAAGATTTTGCAAGTCAACCAACACCTTTTCATTTA
GATCATTGTACAGAAAGAATTATACAGGCTTTTCAAAAAGAATTAAAGAAAGAGAATACGCAAGAATTCACAGTTTATGC
TGTCCAACAAGTGACGCAATTATCTATGGAATTTTTTATCGATCTGTATTCCAAGACTTTTTTGCCAATTACTATTCGAC
AACGTAGATTGTTTCATCCGGTATTTATGCAAGACTTGGAGAAAATAAAAGATTTTATTTTCCCTATTAAATCCATTCTC
GAAAAAGTCTTTGAGAAGGACCTTCTTGAATTAAAGCTGCCTGAAGCACAGAAATTTTTATTAGATGAACAGTACATTGA
GAAAAAAGTTATTTCTATCGCGTGTCGTTTGTTTCAAAAGCAATTTTCTCTTAAAGAAGAATTCCTCCTTCAATATATCA
GTAAAAAATTACAACCCTTTTTCTTTAAACCTTTTGATTTAATTTTTTTACAGCCAGACTTTTTTTTAGATGATTTAAAA
AAGAGTTTAAAATGCGCTGATTTAAATCCGAGCTTAAGTAAGAGCGATCAGGTTTTTCTGATTTGTGCCTATATTCGAAA
ACGAAGAGAAATAAATGATTATCGAAAATATTCGATAAGTTTTTTGGAATTAGAATTTGAAATTAGTCAATTGATGCCCA
CACTTAAACCCTCGAAGATTTTTAAACTAAAAAATTTATATCGAAAGCAAAATAGTTCTAGAAGTTTTGTGGAAAAAATT
TTTAAAAAGAATCAAACTAAAATTTTAAATGTAATAGATGAAAAACATTTAATTGACGAACTCGTACGGCTTAGTTTCGA
TCATTTTTCATTTAACTTAGACATTTTAAACGAAAGCTTTTTTTCAGATATTGAACGAATATTAAATATTAAATTTAGGA
AAGGATGGACTCAAGAATTAGCTTTTCACGCCATGATGTTAGTTAGGACTTATATATTAAATTTTTATAGGTTAAAGATT
GTTAACTATTTAAGTAAATACTGTTTGCTCTCTGAACAAGAGCAGTATTGCCTCTATCCCGGATTTTTCTCTGATTACGA
ATTTATGGAATACATTCAAAGTCAAGTGTATCTTTTGCAAAAAAAAATTTTAAAATCACCCCAAATATCAAATTTACTCA
AAAATTATGAAAAACAATTTTTAAATACTTCTACAATGTCATGGTTGATCGAAGCTTCTGATAAAAATTTTCAACAAAAA
TTTTGCAAAGAGCATTTTTTTCTTGAGCAAATTAGCAATTATTTTACTAAATCGTTTGCTTCAGATCTAACATGGGTTCG
ACTAAATAGTCATCAAGCGTTAGCTGAAGATTTACCTACGAATAAGGAATTTTTAAGGGCTAGATCATTACAAATACCTT
TAACAAATGATTTAAACGAACAACCATTAACTCATAGTTCCCGAAAATTTACGACTTTGACAGATTCTTCGACATTTTTA
ATCAGCCTAGAAGAAAAAATGATTGAAAGTAGCTCAGAAAATGTTTTAGCAGGAGAAGATCTTTTATTTATTCTTCGAAT
GTGGATTCGAAAAACTGTCGAGGATAAAAATGCGAATTTAGATAAACCTATTAATCCCTATAATACAAGTAAAGAAGCTG
TGGATATGCAAATTATTGAAGAGATTCAAAAAGATCTCGAAAAAATTTTTAAACCAATGCTATCTAAATATTATTCACGA
TTACCAAATAAATATAGATATGTCTATGGTGGAGCTTTGCTCAAAAGAGAAATCATTATCCAAGCTAATCATGCAAAAAA
AAGAAAAGAACTATTAGGTTTACTTAAACGGAATGAATTTCCATTGTTGAATAATACTCAAAGCAGCAATTGA

Upstream 100 bases:

>100_bases
AAATTTTAAAAGAAGGACAGCTTGTTACTCTCGATCCTGAAAAAGCCCTTGTTTACAAAGGAGTTGTTTTGGACCAATTG
TTGGCGAGTGGAGAATTTTC

Downstream 100 bases:

>100_bases
AGCTGTATCAGTGCGCAGAATGTTAGTATGTAACCTGACTCCTTGCACACCCATTTTTTTTAACTGCTGCCGTTCTGCAT
CACTCCAACCACTTTCAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 930; Mature: 929

Protein sequence:

>930_residues
MSAVQAFPFHLFSYISPFYYQNYVVNSNQQTFVFHRKFIPIIQKFLEFGTYNDIHRTGIGLSHSVSLQTDLNNVLQFYAL
GHLPQSILEDLKTRQKKQIRQLEEISQHYALNLLSSILSVSQIDPNLESENSLAFFDQLELCALRNNPEKFIKLLSEKSL
DLQHESLLDQIYQMLKFFDKDAFVKVVTAFKKELFVCDYQRALSIYLEANPDQLDELIYAVQESEFKIELISLIDDLVVR
LMFFEQFPLKLSSKLVQQKLIKPLFEEETYEKIYPYAHQYQSAILESFAARVSPSPKLFLKKHLESIFQDFASQPTPFHL
DHCTERIIQAFQKELKKENTQEFTVYAVQQVTQLSMEFFIDLYSKTFLPITIRQRRLFHPVFMQDLEKIKDFIFPIKSIL
EKVFEKDLLELKLPEAQKFLLDEQYIEKKVISIACRLFQKQFSLKEEFLLQYISKKLQPFFFKPFDLIFLQPDFFLDDLK
KSLKCADLNPSLSKSDQVFLICAYIRKRREINDYRKYSISFLELEFEISQLMPTLKPSKIFKLKNLYRKQNSSRSFVEKI
FKKNQTKILNVIDEKHLIDELVRLSFDHFSFNLDILNESFFSDIERILNIKFRKGWTQELAFHAMMLVRTYILNFYRLKI
VNYLSKYCLLSEQEQYCLYPGFFSDYEFMEYIQSQVYLLQKKILKSPQISNLLKNYEKQFLNTSTMSWLIEASDKNFQQK
FCKEHFFLEQISNYFTKSFASDLTWVRLNSHQALAEDLPTNKEFLRARSLQIPLTNDLNEQPLTHSSRKFTTLTDSSTFL
ISLEEKMIESSSENVLAGEDLLFILRMWIRKTVEDKNANLDKPINPYNTSKEAVDMQIIEEIQKDLEKIFKPMLSKYYSR
LPNKYRYVYGGALLKREIIIQANHAKKRKELLGLLKRNEFPLLNNTQSSN

Sequences:

>Translated_930_residues
MSAVQAFPFHLFSYISPFYYQNYVVNSNQQTFVFHRKFIPIIQKFLEFGTYNDIHRTGIGLSHSVSLQTDLNNVLQFYAL
GHLPQSILEDLKTRQKKQIRQLEEISQHYALNLLSSILSVSQIDPNLESENSLAFFDQLELCALRNNPEKFIKLLSEKSL
DLQHESLLDQIYQMLKFFDKDAFVKVVTAFKKELFVCDYQRALSIYLEANPDQLDELIYAVQESEFKIELISLIDDLVVR
LMFFEQFPLKLSSKLVQQKLIKPLFEEETYEKIYPYAHQYQSAILESFAARVSPSPKLFLKKHLESIFQDFASQPTPFHL
DHCTERIIQAFQKELKKENTQEFTVYAVQQVTQLSMEFFIDLYSKTFLPITIRQRRLFHPVFMQDLEKIKDFIFPIKSIL
EKVFEKDLLELKLPEAQKFLLDEQYIEKKVISIACRLFQKQFSLKEEFLLQYISKKLQPFFFKPFDLIFLQPDFFLDDLK
KSLKCADLNPSLSKSDQVFLICAYIRKRREINDYRKYSISFLELEFEISQLMPTLKPSKIFKLKNLYRKQNSSRSFVEKI
FKKNQTKILNVIDEKHLIDELVRLSFDHFSFNLDILNESFFSDIERILNIKFRKGWTQELAFHAMMLVRTYILNFYRLKI
VNYLSKYCLLSEQEQYCLYPGFFSDYEFMEYIQSQVYLLQKKILKSPQISNLLKNYEKQFLNTSTMSWLIEASDKNFQQK
FCKEHFFLEQISNYFTKSFASDLTWVRLNSHQALAEDLPTNKEFLRARSLQIPLTNDLNEQPLTHSSRKFTTLTDSSTFL
ISLEEKMIESSSENVLAGEDLLFILRMWIRKTVEDKNANLDKPINPYNTSKEAVDMQIIEEIQKDLEKIFKPMLSKYYSR
LPNKYRYVYGGALLKREIIIQANHAKKRKELLGLLKRNEFPLLNNTQSSN
>Mature_929_residues
SAVQAFPFHLFSYISPFYYQNYVVNSNQQTFVFHRKFIPIIQKFLEFGTYNDIHRTGIGLSHSVSLQTDLNNVLQFYALG
HLPQSILEDLKTRQKKQIRQLEEISQHYALNLLSSILSVSQIDPNLESENSLAFFDQLELCALRNNPEKFIKLLSEKSLD
LQHESLLDQIYQMLKFFDKDAFVKVVTAFKKELFVCDYQRALSIYLEANPDQLDELIYAVQESEFKIELISLIDDLVVRL
MFFEQFPLKLSSKLVQQKLIKPLFEEETYEKIYPYAHQYQSAILESFAARVSPSPKLFLKKHLESIFQDFASQPTPFHLD
HCTERIIQAFQKELKKENTQEFTVYAVQQVTQLSMEFFIDLYSKTFLPITIRQRRLFHPVFMQDLEKIKDFIFPIKSILE
KVFEKDLLELKLPEAQKFLLDEQYIEKKVISIACRLFQKQFSLKEEFLLQYISKKLQPFFFKPFDLIFLQPDFFLDDLKK
SLKCADLNPSLSKSDQVFLICAYIRKRREINDYRKYSISFLELEFEISQLMPTLKPSKIFKLKNLYRKQNSSRSFVEKIF
KKNQTKILNVIDEKHLIDELVRLSFDHFSFNLDILNESFFSDIERILNIKFRKGWTQELAFHAMMLVRTYILNFYRLKIV
NYLSKYCLLSEQEQYCLYPGFFSDYEFMEYIQSQVYLLQKKILKSPQISNLLKNYEKQFLNTSTMSWLIEASDKNFQQKF
CKEHFFLEQISNYFTKSFASDLTWVRLNSHQALAEDLPTNKEFLRARSLQIPLTNDLNEQPLTHSSRKFTTLTDSSTFLI
SLEEKMIESSSENVLAGEDLLFILRMWIRKTVEDKNANLDKPINPYNTSKEAVDMQIIEEIQKDLEKIFKPMLSKYYSRL
PNKYRYVYGGALLKREIIIQANHAKKRKELLGLLKRNEFPLLNNTQSSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 110420; Mature: 110289

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVQAFPFHLFSYISPFYYQNYVVNSNQQTFVFHRKFIPIIQKFLEFGTYNDIHRTGIG
CCCCHHHHHHHHHHHHHHHHCCEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHCCC
LSHSVSLQTDLNNVLQFYALGHLPQSILEDLKTRQKKQIRQLEEISQHYALNLLSSILSV
CCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQIDPNLESENSLAFFDQLELCALRNNPEKFIKLLSEKSLDLQHESLLDQIYQMLKFFDK
HHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
DAFVKVVTAFKKELFVCDYQRALSIYLEANPDQLDELIYAVQESEFKIELISLIDDLVVR
HHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LMFFEQFPLKLSSKLVQQKLIKPLFEEETYEKIYPYAHQYQSAILESFAARVSPSPKLFL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KKHLESIFQDFASQPTPFHLDHCTERIIQAFQKELKKENTQEFTVYAVQQVTQLSMEFFI
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DLYSKTFLPITIRQRRLFHPVFMQDLEKIKDFIFPIKSILEKVFEKDLLELKLPEAQKFL
HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LDEQYIEKKVISIACRLFQKQFSLKEEFLLQYISKKLQPFFFKPFDLIFLQPDFFLDDLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHH
KSLKCADLNPSLSKSDQVFLICAYIRKRREINDYRKYSISFLELEFEISQLMPTLKPSKI
HHCEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHCCCCCHHHH
FKLKNLYRKQNSSRSFVEKIFKKNQTKILNVIDEKHLIDELVRLSFDHFSFNLDILNESF
HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHH
FSDIERILNIKFRKGWTQELAFHAMMLVRTYILNFYRLKIVNYLSKYCLLSEQEQYCLYP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
GFFSDYEFMEYIQSQVYLLQKKILKSPQISNLLKNYEKQFLNTSTMSWLIEASDKNFQQK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHEECCCCHHHHH
FCKEHFFLEQISNYFTKSFASDLTWVRLNSHQALAEDLPTNKEFLRARSLQIPLTNDLNE
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCC
QPLTHSSRKFTTLTDSSTFLISLEEKMIESSSENVLAGEDLLFILRMWIRKTVEDKNANL
CCCCCCCCCEEEEECCCEEEEEEHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCC
DKPINPYNTSKEAVDMQIIEEIQKDLEKIFKPMLSKYYSRLPNKYRYVYGGALLKREIII
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHE
QANHAKKRKELLGLLKRNEFPLLNNTQSSN
ECCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAVQAFPFHLFSYISPFYYQNYVVNSNQQTFVFHRKFIPIIQKFLEFGTYNDIHRTGIG
CCCHHHHHHHHHHHHHHHHCCEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHCCC
LSHSVSLQTDLNNVLQFYALGHLPQSILEDLKTRQKKQIRQLEEISQHYALNLLSSILSV
CCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQIDPNLESENSLAFFDQLELCALRNNPEKFIKLLSEKSLDLQHESLLDQIYQMLKFFDK
HHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
DAFVKVVTAFKKELFVCDYQRALSIYLEANPDQLDELIYAVQESEFKIELISLIDDLVVR
HHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LMFFEQFPLKLSSKLVQQKLIKPLFEEETYEKIYPYAHQYQSAILESFAARVSPSPKLFL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KKHLESIFQDFASQPTPFHLDHCTERIIQAFQKELKKENTQEFTVYAVQQVTQLSMEFFI
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DLYSKTFLPITIRQRRLFHPVFMQDLEKIKDFIFPIKSILEKVFEKDLLELKLPEAQKFL
HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LDEQYIEKKVISIACRLFQKQFSLKEEFLLQYISKKLQPFFFKPFDLIFLQPDFFLDDLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHH
KSLKCADLNPSLSKSDQVFLICAYIRKRREINDYRKYSISFLELEFEISQLMPTLKPSKI
HHCEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHCCCCCHHHH
FKLKNLYRKQNSSRSFVEKIFKKNQTKILNVIDEKHLIDELVRLSFDHFSFNLDILNESF
HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHH
FSDIERILNIKFRKGWTQELAFHAMMLVRTYILNFYRLKIVNYLSKYCLLSEQEQYCLYP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
GFFSDYEFMEYIQSQVYLLQKKILKSPQISNLLKNYEKQFLNTSTMSWLIEASDKNFQQK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHEECCCCHHHHH
FCKEHFFLEQISNYFTKSFASDLTWVRLNSHQALAEDLPTNKEFLRARSLQIPLTNDLNE
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCC
QPLTHSSRKFTTLTDSSTFLISLEEKMIESSSENVLAGEDLLFILRMWIRKTVEDKNANL
CCCCCCCCCEEEEECCCEEEEEEHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCC
DKPINPYNTSKEAVDMQIIEEIQKDLEKIFKPMLSKYYSRLPNKYRYVYGGALLKREIII
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHE
QANHAKKRKELLGLLKRNEFPLLNNTQSSN
ECCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA