Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447186
Identifier: 46447186
GI number: 46447186
Start: 1857261
End: 1857554
Strand: Reverse
Name: 46447186
Synonym: pc1552
Alternate gene names: NA
Gene position: 1857554-1857261 (Counterclockwise)
Preceding gene: 46447190
Following gene: 46447179
Centisome position: 76.93
GC content: 30.27
Gene sequence:
>294_bases TTGCCAACCGTCCATTATTTGCCTGGCATTCCCAATAAAGCTACTCATGAATTCGCTCATGTTTTTTATTTAAAGGAAAT TGAGAAAAAGATAAATAAATTATCTGAAAACAGAATTGGGCAAAATTTTCTACAAAAATATGGAAAAAACCATAATGGCT TTGACGAGTATTTATCCAATACAGAATTAAATCTAGAGATAATATTAGCGTCTCAAAAAATTCAGTCGATCGAAAGGAAG TCAACATTATTGATAAGCTATAATCAAAATGATGCCAACTTGCTTCTACTTTAA
Upstream 100 bases:
>100_bases GGGAGAGTAGGTCGCCGCCAAACTTTTCTTTTTGGCCTTAAAACACCCGTTTTAAGGCCCTTTTTTTTGCCCCGTTGCTT CTCTTTTCTTTGAGGCTCTC
Downstream 100 bases:
>100_bases AAGAAAATTATTTCTGCTAAAGTTACCGTGGCTATTACAGAATCTGTTAAAGAAGCTAAGTCTTTGAAAGAGCATTCTTT TAAACACTCAAAGCATTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MPTVHYLPGIPNKATHEFAHVFYLKEIEKKINKLSENRIGQNFLQKYGKNHNGFDEYLSNTELNLEIILASQKIQSIERK STLLISYNQNDANLLLL
Sequences:
>Translated_97_residues MPTVHYLPGIPNKATHEFAHVFYLKEIEKKINKLSENRIGQNFLQKYGKNHNGFDEYLSNTELNLEIILASQKIQSIERK STLLISYNQNDANLLLL >Mature_96_residues PTVHYLPGIPNKATHEFAHVFYLKEIEKKINKLSENRIGQNFLQKYGKNHNGFDEYLSNTELNLEIILASQKIQSIERKS TLLISYNQNDANLLLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11259; Mature: 11128
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTVHYLPGIPNKATHEFAHVFYLKEIEKKINKLSENRIGQNFLQKYGKNHNGFDEYLSN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHCC TELNLEIILASQKIQSIERKSTLLISYNQNDANLLLL CCCEEEEEEECHHHHHHHCCCEEEEEECCCCCEEEEC >Mature Secondary Structure PTVHYLPGIPNKATHEFAHVFYLKEIEKKINKLSENRIGQNFLQKYGKNHNGFDEYLSN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHCC TELNLEIILASQKIQSIERKSTLLISYNQNDANLLLL CCCEEEEEEECHHHHHHHCCCEEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA