Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447157
Identifier: 46447157
GI number: 46447157
Start: 1827501
End: 1827752
Strand: Reverse
Name: 46447157
Synonym: pc1523
Alternate gene names: NA
Gene position: 1827752-1827501 (Counterclockwise)
Preceding gene: 46447158
Following gene: 46447156
Centisome position: 75.7
GC content: 34.92
Gene sequence:
>252_bases GTGGTGCCATATTATATTTTGGTCTACGAATGTATCAACGAATTTGAGAAGAGGAAAACACGTTTTTTTCTCACGCATGT TTATTTGGTCTTTGTGAAAAAATGCGGGACAAAATCCTTCAGCAAACCGGTACTCAAGGAATTAAAGTTAATTTTTTACA AGTATTTACCCTGTTTTGAAACCCCGATTGGTCACAAATTTGAAGCAAAGATGACTATGTTCGTCTTCTCATTAACTATC CACCTAAAATAG
Upstream 100 bases:
>100_bases AGCCTCATCTCTATGCTAACAACATTTATTAAGCTGAATTTGCGACGCTTTCGCTTGTTTTTCGTAGGGCGTAACTGAAT GAAATGTTTTGTGAATTATC
Downstream 100 bases:
>100_bases CTGTCTCTAAGGTGGTAAATAGTTTAAAATTTGTTTCCTTCAAGCTGGTCAGGAAAAAAAATATCTAATTATTCACATAC GCTGTGGAGCGACAGTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MVPYYILVYECINEFEKRKTRFFLTHVYLVFVKKCGTKSFSKPVLKELKLIFYKYLPCFETPIGHKFEAKMTMFVFSLTI HLK
Sequences:
>Translated_83_residues MVPYYILVYECINEFEKRKTRFFLTHVYLVFVKKCGTKSFSKPVLKELKLIFYKYLPCFETPIGHKFEAKMTMFVFSLTI HLK >Mature_83_residues MVPYYILVYECINEFEKRKTRFFLTHVYLVFVKKCGTKSFSKPVLKELKLIFYKYLPCFETPIGHKFEAKMTMFVFSLTI HLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10042; Mature: 10042
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPYYILVYECINEFEKRKTRFFLTHVYLVFVKKCGTKSFSKPVLKELKLIFYKYLPCFE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHC TPIGHKFEAKMTMFVFSLTIHLK CCCCCCHHHHHHHHHHEEEEECC >Mature Secondary Structure MVPYYILVYECINEFEKRKTRFFLTHVYLVFVKKCGTKSFSKPVLKELKLIFYKYLPCFE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHC TPIGHKFEAKMTMFVFSLTIHLK CCCCCCHHHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA