Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447061
Identifier: 46447061
GI number: 46447061
Start: 1701456
End: 1701896
Strand: Reverse
Name: 46447061
Synonym: pc1427
Alternate gene names: NA
Gene position: 1701896-1701456 (Counterclockwise)
Preceding gene: 46447083
Following gene: 46447060
Centisome position: 70.49
GC content: 31.29
Gene sequence:
>441_bases TTGACGAATTTATTATTGGGATTGTTCATCGTGAAGACAGTGAATCTGTCAGAGCTAGCAACAGTTTTATATAGTAAGGC AAAAATTGATTCTAATTTCAAACGAATACAAAGATTTTTCAACTGGCTAACTTTTTTGAATGATTATCAAGAGGTCATAA CAGATTTAGTGATTATCATTTTAGATCTTAAAAATAAGAAAAATGACTTGGCATTAGATAGGACAGATTGGAAATTCGGC AAAAAACACATCAATATTTTGACCTTAGGAGTTAATTTTAAAGGGATTAGCATTCCTCTAGCTTGGATTTCCTTAGGAAG AGCAGGTAATTCCAAAACCCTCGATCGTCTATCAGTACTTAAAAGAGTGATGGATAAAATTCATATTAATTCATTTACAG CAGATAGGGAATTTATAGGATCCGAATGGTTTGATTTTTAA
Upstream 100 bases:
>100_bases ATACTTCAGAAACCACTCTAGAGGTACTATGAAACACATATGCGAGCTGCATAACATTTTAGGTCAATATTTTAATTGGA ACAAGTCAAGATTAACTGTA
Downstream 100 bases:
>100_bases TTAATTCAAAAATCCCGAGCTATCTTCGAGTTAAAGAAGACACTCAAGTGTTACACCCAAAAGGAAACTACACAGTGGGC TTGAGAGATATATGTAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTNLLLGLFIVKTVNLSELATVLYSKAKIDSNFKRIQRFFNWLTFLNDYQEVITDLVIIILDLKNKKNDLALDRTDWKFG KKHINILTLGVNFKGISIPLAWISLGRAGNSKTLDRLSVLKRVMDKIHINSFTADREFIGSEWFDF
Sequences:
>Translated_146_residues MTNLLLGLFIVKTVNLSELATVLYSKAKIDSNFKRIQRFFNWLTFLNDYQEVITDLVIIILDLKNKKNDLALDRTDWKFG KKHINILTLGVNFKGISIPLAWISLGRAGNSKTLDRLSVLKRVMDKIHINSFTADREFIGSEWFDF >Mature_145_residues TNLLLGLFIVKTVNLSELATVLYSKAKIDSNFKRIQRFFNWLTFLNDYQEVITDLVIIILDLKNKKNDLALDRTDWKFGK KHINILTLGVNFKGISIPLAWISLGRAGNSKTLDRLSVLKRVMDKIHINSFTADREFIGSEWFDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16910; Mature: 16779
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLLLGLFIVKTVNLSELATVLYSKAKIDSNFKRIQRFFNWLTFLNDYQEVITDLVIII CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDLKNKKNDLALDRTDWKFGKKHINILTLGVNFKGISIPLAWISLGRAGNSKTLDRLSVL HHCCCCCCCCEECCCCCHHCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHH KRVMDKIHINSFTADREFIGSEWFDF HHHHHHHHCCCCCCHHHHHCCCCCCC >Mature Secondary Structure TNLLLGLFIVKTVNLSELATVLYSKAKIDSNFKRIQRFFNWLTFLNDYQEVITDLVIII CHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDLKNKKNDLALDRTDWKFGKKHINILTLGVNFKGISIPLAWISLGRAGNSKTLDRLSVL HHCCCCCCCCEECCCCCHHCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHH KRVMDKIHINSFTADREFIGSEWFDF HHHHHHHHCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA