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The map label for this gene is higB-2 [H]

Identifier: 46447076

GI number: 46447076

Start: 1716302

End: 1716655

Strand: Direct

Name: higB-2 [H]

Synonym: pc1442

Alternate gene names: 46447076

Gene position: 1716302-1716655 (Clockwise)

Preceding gene: 46447075

Following gene: 46447077

Centisome position: 71.08

GC content: 33.05

Gene sequence:

>354_bases
ATGGAACGAACAATTATTCAGTTATCGCCTTTTTCTCGCTATTTAGATGAATTAATCAAACAAGGCAAATTGTCAATATC
CGATTTTGACGATTTTGAATGGAAACTAATTAAAAATCCTCAAGAAGGCGATGTTATCCCTGGTTTATCGGGCCTAAGGA
AAACTCGATTAAAAAGTATGAATAAAGGGAAAAGTGGAGGCTTCAGAGTTGACTATTTAGATATTCCAGAAAAGGGCAAA
CTCTATCTCATTGTCTTATATCCTAAAAATGTGAAAGAAGATTTATCAGCTGAAGAAAAAAAACTGATTGTTCGTTTGGT
GAAACAATTAAAAGAGGAAGTAAATCATGGGTAA

Upstream 100 bases:

>100_bases
CCCGATTGTGCGTCTTAACGTACCTATTTTACCTAGATAAGTTTTAGTTTTTGCATTTAGTTAATTGTCTTAATATACCA
CCAAGTGGTATATTAAAGAT

Downstream 100 bases:

>100_bases
AATGTTTGACCTTCTTAAAGAAGGATTAGAAGAGGCTATTTCCTATGAAAAAGGGAGTTTTAAAAATGTTAGAGTCAAAA
AAGTTAGAATTGATACTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MERTIIQLSPFSRYLDELIKQGKLSISDFDDFEWKLIKNPQEGDVIPGLSGLRKTRLKSMNKGKSGGFRVDYLDIPEKGK
LYLIVLYPKNVKEDLSAEEKKLIVRLVKQLKEEVNHG

Sequences:

>Translated_117_residues
MERTIIQLSPFSRYLDELIKQGKLSISDFDDFEWKLIKNPQEGDVIPGLSGLRKTRLKSMNKGKSGGFRVDYLDIPEKGK
LYLIVLYPKNVKEDLSAEEKKLIVRLVKQLKEEVNHG
>Mature_117_residues
MERTIIQLSPFSRYLDELIKQGKLSISDFDDFEWKLIKNPQEGDVIPGLSGLRKTRLKSMNKGKSGGFRVDYLDIPEKGK
LYLIVLYPKNVKEDLSAEEKKLIVRLVKQLKEEVNHG

Specific function: Inhibits translation by cleavage of mRNA [H]

COG id: COG2026

COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13506; Mature: 13506

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTIIQLSPFSRYLDELIKQGKLSISDFDDFEWKLIKNPQEGDVIPGLSGLRKTRLKSM
CCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHC
NKGKSGGFRVDYLDIPEKGKLYLIVLYPKNVKEDLSAEEKKLIVRLVKQLKEEVNHG
CCCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MERTIIQLSPFSRYLDELIKQGKLSISDFDDFEWKLIKNPQEGDVIPGLSGLRKTRLKSM
CCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHC
NKGKSGGFRVDYLDIPEKGKLYLIVLYPKNVKEDLSAEEKKLIVRLVKQLKEEVNHG
CCCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]