Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447037
Identifier: 46447037
GI number: 46447037
Start: 1681162
End: 1681563
Strand: Reverse
Name: 46447037
Synonym: pc1403
Alternate gene names: NA
Gene position: 1681563-1681162 (Counterclockwise)
Preceding gene: 46447038
Following gene: 46447013
Centisome position: 69.65
GC content: 30.35
Gene sequence:
>402_bases ATGTCTTTAAATGAGATCAATGATAGCAGCAAATCACTGACCCATCAAAAAAATGAAGCTTTAAAAACAAAATCCTCAAC CAAACAAAATTTTGTTAAATCACCTATTTCATTAAATAAACCTATTCCTTCCATTCCTAAAAATTTAAACAAAGAAAATT TTAAAAACCTGGATTGGAAAAAAACTTTTAATTCAGACGAAAAGAAATTTTTAAATTATCTTCTCCATCTTAAGCCTGTT CAAGGAGATTGCATTGAAGAAAAGCATGCAACCTGGTGGATCAAAAATTTTGGGATCGAGAAGATCAAAATAGCTCTTCA AGTTTACTGGCAACAACAAAGTAAATTCAAAAATTCCTATGCCAATGAAGCTAGCAGCATATGTCAGGCAAGCTTTAAAT AA
Upstream 100 bases:
>100_bases TACGTCCCATGGGCTCGAATTCTTGTACCCCCTATTTAGAAAAATCGAAACAGGTGGTCATGAAAATGAGACGACATATA CAAATATATCAATGACATCT
Downstream 100 bases:
>100_bases AGGCACGCAACCTTGCAAAGGTGCTGATAAAAAAATAAAAGCATTGCTGAGCAATTTAAAAACGAAATGGGATGACTGAC TTAACAATAACAGAAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSLNEINDSSKSLTHQKNEALKTKSSTKQNFVKSPISLNKPIPSIPKNLNKENFKNLDWKKTFNSDEKKFLNYLLHLKPV QGDCIEEKHATWWIKNFGIEKIKIALQVYWQQQSKFKNSYANEASSICQASFK
Sequences:
>Translated_133_residues MSLNEINDSSKSLTHQKNEALKTKSSTKQNFVKSPISLNKPIPSIPKNLNKENFKNLDWKKTFNSDEKKFLNYLLHLKPV QGDCIEEKHATWWIKNFGIEKIKIALQVYWQQQSKFKNSYANEASSICQASFK >Mature_132_residues SLNEINDSSKSLTHQKNEALKTKSSTKQNFVKSPISLNKPIPSIPKNLNKENFKNLDWKKTFNSDEKKFLNYLLHLKPVQ GDCIEEKHATWWIKNFGIEKIKIALQVYWQQQSKFKNSYANEASSICQASFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15479; Mature: 15348
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNEINDSSKSLTHQKNEALKTKSSTKQNFVKSPISLNKPIPSIPKNLNKENFKNLDWK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCH KTFNSDEKKFLNYLLHLKPVQGDCIEEKHATWWIKNFGIEKIKIALQVYWQQQSKFKNSY HCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ANEASSICQASFK HHHHHHHHHHCCC >Mature Secondary Structure SLNEINDSSKSLTHQKNEALKTKSSTKQNFVKSPISLNKPIPSIPKNLNKENFKNLDWK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCH KTFNSDEKKFLNYLLHLKPVQGDCIEEKHATWWIKNFGIEKIKIALQVYWQQQSKFKNSY HCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ANEASSICQASFK HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA