Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is pckG [H]
Identifier: 46447005
GI number: 46447005
Start: 1640925
End: 1642700
Strand: Reverse
Name: pckG [H]
Synonym: pc1371
Alternate gene names: 46447005
Gene position: 1642700-1640925 (Counterclockwise)
Preceding gene: 46447006
Following gene: 46447004
Centisome position: 68.04
GC content: 39.75
Gene sequence:
>1776_bases ATGAAATATGAAGAATTAAAACCTTGGATTCAAGAAATCGCTGAACTTTGTCAACCTCAAATTGTGCATATTTGCGATGG GTCTAAAAAAGAATACGAAGATTTATGCGCTTTAATGGTTAAAAAAGGAACTTTGATCCCATTAAATGCAGCTAAACGTT CTCAAAGTTATTTATGCCGCTCAGACCCCCATGATGTGGCTAGAGTTGAAGATAGAACGTTTATTTGTTCTAAAAATTCT GAAGATGCTGGACCTACTAATCAGTGGCGTGAACCTTTAGAAATGAAACAAACTTTGCGGACCCTTTTTAAAGGTTCAAT GCAGGGAAGGACGCTATATGTGATTCCATTTAGTATGGGTCCTTTAGGTTCTAAGATTTCTCATTTAGGAGTTCAAATTA CTGATTCACCCTACGTCGTCTGTAATATGCGATTAATGACGCGCATGGGTAAACAAGTGGAAGAATTATTACCAACTCAA GAGTTTGTTCCCTGTCTTCATTCCGTCGGAATGCCTTTGAAAGATAGTTTAAAAGATGTCCCGTGGCCTTGTTCTAAAGA TAAATATATTGTTCATTTTCCTGAAAGTCGTGAAATTTGGTCATTTGGAAGTGGTTATGGAGGAAATGCTCTTTTAGGAA AAAAATGTTATGCTTTGCGAATTGCTTCTGTGATGGCTCGTGATGAGGGATGGCTAGCAGAGCATATGTTGATCTTAGGT ATAACAAATCCTCAAGGAGAAAAAAAATATTTAGCGGCTGCCTTTCCCAGTGCTTGTGGAAAAACAAACTTAGCTATGAT GAAACCCACCTTACCTGGTTGGAAAATTGAAACAGTTGGCGATGATATTGCTTGGATGAAATTTGGGGAAGATGGGCAGT TATACGCGATTAATCCAGAAGCTGGTTTTTTTGGTGTAGCAAGCGGAACAGCCATGCAATCAAATCCCAACGCCATGTTA ACAATTGATCGTCAAGTTATTTTTACTAATGTAGCATTGACAGATGAAGGAGATGTGTGGTGGGAAGGGATGACAGAAAC GCCTCCTCAGCATCTAGTCAATTGGTTAGGGCATGAATGGACACCTCAATCTAAAGAAAAAGCAGCTCATCCTAACTCTC GTTTTACAGTTGCCGCTAAACAATGTCCGGTTATTGATTCTAAATGGGAAGATCCTAAGGGTGTTCCCATCTCTGCAATT TTATTTGGCGGACGACGCTCACATACCATCCCTTTAATTTGCGAAGCTTTTAATTGGCAGCACGGAACATTTTTAGGCGC TTCTATTTCCTCTGAGACGACAGCAGCTTCCACAGGAGAAGTGGGTAAGCTTCGTCATGATCCTTTTGCAATGCTTCCTT TCTGTGGATACCATATGGGAGATTATTTTAATCACTGGTTGAAAATGGGCCTAAAAAAGGGGGTTAAGCTACCCAAAATT TTTTACGCAAATTGGTTTAGAAAAGGAGATAAGGGGGATTATCTTTGGCCTGGCTTTGGAGAAAATTGTCGAGTGTTAAA ATGGATTTTTGAACGCACTTCCGGCAAAGGTCAAGCCATTCGAACACCGATTGGGTATCTGCCAACCGAAGAATCAATTG ATACGCAAGGGCTTGTTCTCAAACCTCAAGTGATGGAAAAACTTCTTCAAGTAGATCGAGAAGCTTGGCAAAAAGAAATA CAAGAGATTAGACACTATTTTACCCGTTTTGGGAATAAACTTCCTCAAGCCATTCAGGAAGAATGGCAGCAATTAAAAGA TCGCTTTAATGGATAA
Upstream 100 bases:
>100_bases TTTATTAGCAGTTTGTTTAGGAACAGGAAAAGCCCTTGAGTACTTAGATAAATTTAAAAAACGTAAAGCAATTTGAGTTT TTTAAGAGGAATTTTTCAGC
Downstream 100 bases:
>100_bases ATGAATTTAAATGATGTCCCTTGATCCTTCTCCTCTTAAAAAAATCAGACGTTTAAGCCAAGCTTTAATGATAAGTGGTG CATTAAATATTGGAGTCCTC
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MKYEELKPWIQEIAELCQPQIVHICDGSKKEYEDLCALMVKKGTLIPLNAAKRSQSYLCRSDPHDVARVEDRTFICSKNS EDAGPTNQWREPLEMKQTLRTLFKGSMQGRTLYVIPFSMGPLGSKISHLGVQITDSPYVVCNMRLMTRMGKQVEELLPTQ EFVPCLHSVGMPLKDSLKDVPWPCSKDKYIVHFPESREIWSFGSGYGGNALLGKKCYALRIASVMARDEGWLAEHMLILG ITNPQGEKKYLAAAFPSACGKTNLAMMKPTLPGWKIETVGDDIAWMKFGEDGQLYAINPEAGFFGVASGTAMQSNPNAML TIDRQVIFTNVALTDEGDVWWEGMTETPPQHLVNWLGHEWTPQSKEKAAHPNSRFTVAAKQCPVIDSKWEDPKGVPISAI LFGGRRSHTIPLICEAFNWQHGTFLGASISSETTAASTGEVGKLRHDPFAMLPFCGYHMGDYFNHWLKMGLKKGVKLPKI FYANWFRKGDKGDYLWPGFGENCRVLKWIFERTSGKGQAIRTPIGYLPTEESIDTQGLVLKPQVMEKLLQVDREAWQKEI QEIRHYFTRFGNKLPQAIQEEWQQLKDRFNG
Sequences:
>Translated_591_residues MKYEELKPWIQEIAELCQPQIVHICDGSKKEYEDLCALMVKKGTLIPLNAAKRSQSYLCRSDPHDVARVEDRTFICSKNS EDAGPTNQWREPLEMKQTLRTLFKGSMQGRTLYVIPFSMGPLGSKISHLGVQITDSPYVVCNMRLMTRMGKQVEELLPTQ EFVPCLHSVGMPLKDSLKDVPWPCSKDKYIVHFPESREIWSFGSGYGGNALLGKKCYALRIASVMARDEGWLAEHMLILG ITNPQGEKKYLAAAFPSACGKTNLAMMKPTLPGWKIETVGDDIAWMKFGEDGQLYAINPEAGFFGVASGTAMQSNPNAML TIDRQVIFTNVALTDEGDVWWEGMTETPPQHLVNWLGHEWTPQSKEKAAHPNSRFTVAAKQCPVIDSKWEDPKGVPISAI LFGGRRSHTIPLICEAFNWQHGTFLGASISSETTAASTGEVGKLRHDPFAMLPFCGYHMGDYFNHWLKMGLKKGVKLPKI FYANWFRKGDKGDYLWPGFGENCRVLKWIFERTSGKGQAIRTPIGYLPTEESIDTQGLVLKPQVMEKLLQVDREAWQKEI QEIRHYFTRFGNKLPQAIQEEWQQLKDRFNG >Mature_591_residues MKYEELKPWIQEIAELCQPQIVHICDGSKKEYEDLCALMVKKGTLIPLNAAKRSQSYLCRSDPHDVARVEDRTFICSKNS EDAGPTNQWREPLEMKQTLRTLFKGSMQGRTLYVIPFSMGPLGSKISHLGVQITDSPYVVCNMRLMTRMGKQVEELLPTQ EFVPCLHSVGMPLKDSLKDVPWPCSKDKYIVHFPESREIWSFGSGYGGNALLGKKCYALRIASVMARDEGWLAEHMLILG ITNPQGEKKYLAAAFPSACGKTNLAMMKPTLPGWKIETVGDDIAWMKFGEDGQLYAINPEAGFFGVASGTAMQSNPNAML TIDRQVIFTNVALTDEGDVWWEGMTETPPQHLVNWLGHEWTPQSKEKAAHPNSRFTVAAKQCPVIDSKWEDPKGVPISAI LFGGRRSHTIPLICEAFNWQHGTFLGASISSETTAASTGEVGKLRHDPFAMLPFCGYHMGDYFNHWLKMGLKKGVKLPKI FYANWFRKGDKGDYLWPGFGENCRVLKWIFERTSGKGQAIRTPIGYLPTEESIDTQGLVLKPQVMEKLLQVDREAWQKEI QEIRHYFTRFGNKLPQAIQEEWQQLKDRFNG
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI66346721, Length=599, Percent_Identity=51.5859766277129, Blast_Score=636, Evalue=0.0, Organism=Homo sapiens, GI187281517, Length=601, Percent_Identity=52.0798668885191, Blast_Score=633, Evalue=0.0, Organism=Homo sapiens, GI66346723, Length=391, Percent_Identity=52.1739130434783, Blast_Score=405, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17555492, Length=614, Percent_Identity=50.3257328990228, Blast_Score=613, Evalue=1e-175, Organism=Caenorhabditis elegans, GI71989645, Length=600, Percent_Identity=48.3333333333333, Blast_Score=584, Evalue=1e-167, Organism=Caenorhabditis elegans, GI71989658, Length=600, Percent_Identity=48.3333333333333, Blast_Score=583, Evalue=1e-167, Organism=Caenorhabditis elegans, GI71989653, Length=587, Percent_Identity=48.5519591141397, Blast_Score=576, Evalue=1e-164, Organism=Caenorhabditis elegans, GI32564411, Length=547, Percent_Identity=52.2851919561243, Blast_Score=576, Evalue=1e-164, Organism=Caenorhabditis elegans, GI32564407, Length=521, Percent_Identity=52.5911708253359, Blast_Score=547, Evalue=1e-156, Organism=Caenorhabditis elegans, GI71989649, Length=498, Percent_Identity=50.2008032128514, Blast_Score=508, Evalue=1e-144, Organism=Caenorhabditis elegans, GI32564409, Length=369, Percent_Identity=50.9485094850949, Blast_Score=376, Evalue=1e-104, Organism=Caenorhabditis elegans, GI17540956, Length=500, Percent_Identity=28.8, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI24655085, Length=599, Percent_Identity=50.9181969949916, Blast_Score=626, Evalue=1e-179, Organism=Drosophila melanogaster, GI24655082, Length=599, Percent_Identity=52.5876460767947, Blast_Score=620, Evalue=1e-178, Organism=Drosophila melanogaster, GI161077226, Length=566, Percent_Identity=53.1802120141343, Blast_Score=588, Evalue=1e-168, Organism=Drosophila melanogaster, GI24655088, Length=501, Percent_Identity=53.2934131736527, Blast_Score=556, Evalue=1e-158,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 66824; Mature: 66824
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS00505 PEPCK_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYEELKPWIQEIAELCQPQIVHICDGSKKEYEDLCALMVKKGTLIPLNAAKRSQSYLCR CCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCEEECCHHHCCCCCCCC SDPHDVARVEDRTFICSKNSEDAGPTNQWREPLEMKQTLRTLFKGSMQGRTLYVIPFSMG CCCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC PLGSKISHLGVQITDSPYVVCNMRLMTRMGKQVEELLPTQEFVPCLHSVGMPLKDSLKDV CCCCHHHHCCEEECCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCC PWPCSKDKYIVHFPESREIWSFGSGYGGNALLGKKCYALRIASVMARDEGWLAEHMLILG CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEE ITNPQGEKKYLAAAFPSACGKTNLAMMKPTLPGWKIETVGDDIAWMKFGEDGQLYAINPE ECCCCCCHHEEHHHCCHHCCCCCEEEECCCCCCCEEEECCCCEEEEEECCCCCEEEECCC AGFFGVASGTAMQSNPNAMLTIDRQVIFTNVALTDEGDVWWEGMTETPPQHLVNWLGHEW CCEEEECCCCEECCCCCEEEEEECEEEEEEEEEECCCCEEECCCCCCCHHHHHHHHCCCC TPQSKEKAAHPNSRFTVAAKQCPVIDSKWEDPKGVPISAILFGGRRSHTIPLICEAFNWQ CCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCC HGTFLGASISSETTAASTGEVGKLRHDPFAMLPFCGYHMGDYFNHWLKMGLKKGVKLPKI CCEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHH FYANWFRKGDKGDYLWPGFGENCRVLKWIFERTSGKGQAIRTPIGYLPTEESIDTQGLVL HHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCEEE KPQVMEKLLQVDREAWQKEIQEIRHYFTRFGNKLPQAIQEEWQQLKDRFNG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKYEELKPWIQEIAELCQPQIVHICDGSKKEYEDLCALMVKKGTLIPLNAAKRSQSYLCR CCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCEEECCHHHCCCCCCCC SDPHDVARVEDRTFICSKNSEDAGPTNQWREPLEMKQTLRTLFKGSMQGRTLYVIPFSMG CCCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC PLGSKISHLGVQITDSPYVVCNMRLMTRMGKQVEELLPTQEFVPCLHSVGMPLKDSLKDV CCCCHHHHCCEEECCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCC PWPCSKDKYIVHFPESREIWSFGSGYGGNALLGKKCYALRIASVMARDEGWLAEHMLILG CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEE ITNPQGEKKYLAAAFPSACGKTNLAMMKPTLPGWKIETVGDDIAWMKFGEDGQLYAINPE ECCCCCCHHEEHHHCCHHCCCCCEEEECCCCCCCEEEECCCCEEEEEECCCCCEEEECCC AGFFGVASGTAMQSNPNAMLTIDRQVIFTNVALTDEGDVWWEGMTETPPQHLVNWLGHEW CCEEEECCCCEECCCCCEEEEEECEEEEEEEEEECCCCEEECCCCCCCHHHHHHHHCCCC TPQSKEKAAHPNSRFTVAAKQCPVIDSKWEDPKGVPISAILFGGRRSHTIPLICEAFNWQ CCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCC HGTFLGASISSETTAASTGEVGKLRHDPFAMLPFCGYHMGDYFNHWLKMGLKKGVKLPKI CCEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHH FYANWFRKGDKGDYLWPGFGENCRVLKWIFERTSGKGQAIRTPIGYLPTEESIDTQGLVL HHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCEEE KPQVMEKLLQVDREAWQKEIQEIRHYFTRFGNKLPQAIQEEWQQLKDRFNG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA