Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is pssA [H]

Identifier: 46446904

GI number: 46446904

Start: 1516627

End: 1517490

Strand: Reverse

Name: pssA [H]

Synonym: pc1270

Alternate gene names: 46446904

Gene position: 1517490-1516627 (Counterclockwise)

Preceding gene: 46446907

Following gene: 46446901

Centisome position: 62.85

GC content: 38.89

Gene sequence:

>864_bases
ATGCATTCTCTTCAACGGAAGAAAATTTATTTTTTACCTAATGTCATTACCGCTTTTGGTCTTTCTTGTGGACTTTTTGT
CATCTTTAAAATGAATATGACGGGGGTAGGAGAAGTGACCCCACAAATTTTAACCGCTGTGACAGCTATATTGCTTTTAG
CTGCGTTTGCCGATTTGATGGATGGAGCAGTCGCTCGCGTTATCAAAGCGGAAAGTGATTTTGGGGTAGTATTTGACACA
TTGGCTGATGCCATTTCTTTTGGGGTGGCCCCTTCTGTAATTATTTTAAAAAGCCTTTCTGTTGATCCCAGTACAAAATT
ATCTTTTTTAGTTACCATGTCTGCAATTGTCTTTTCACTTTGTGGAGTTCTTCGTCTAGTTAGGTTTAATGTAGCAGCAT
TAGCTACAAAAAATAATGTTGAATTGGCTGTTGCGCATAAGAAGCATTTTACAGGACTTCCAATTCCTGCGGCAGCGGCA
GCGGCAGTTTCTCTTAATTTTTTCTTGTTTAATCCCAATTTTGAGTGGGTAAAACAATTTCCTACCCACAGCCAAACCTG
GATTTTATCTGTGATGTTGATGCTATTAGGATATTGCATGGTAAGTCGCTGGAAATTCCCTAGTGTCAAAAGTTTAGAAA
TAAAAGTTTCTTCTTTTCGTCTTGTTTTTTTCACAGTACTTGCAGCTGTTTTGGTCTTCTATGGTATTCTTCATCATTTT
GCCTTAGCATGTACGGTTCTTTCCTGGGGATATATTTTATTGGCTTTGACCTTAGCAATGTTTCGTGTTGTAGCAGGAAG
ACGGTCCAAAACTTTAGAGGAATTTGAGCCGGAACCAGAGGAATTGGATGAGGTTGAAGAGTGA

Upstream 100 bases:

>100_bases
ATTGTTGATTAAAGAATTCTTCAAGGTTTGGTTTAAAATAAGATTGTCAGGTATGTTATTTACAAATTCTCTCATTTAAC
TTTTGGAGTGATTAACCGAT

Downstream 100 bases:

>100_bases
ATTGGGATTTTTCCTGGTTTATTTTTTCACAAAATGGTTTGTTTAGAAAGTTATCAAAAACATTATTCGACAATAAATAT
TGCACAATGCTTGCAAATAA

Product: putative cdpdiacylglycerol-serine O-phosphatidyltransferase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MHSLQRKKIYFLPNVITAFGLSCGLFVIFKMNMTGVGEVTPQILTAVTAILLLAAFADLMDGAVARVIKAESDFGVVFDT
LADAISFGVAPSVIILKSLSVDPSTKLSFLVTMSAIVFSLCGVLRLVRFNVAALATKNNVELAVAHKKHFTGLPIPAAAA
AAVSLNFFLFNPNFEWVKQFPTHSQTWILSVMLMLLGYCMVSRWKFPSVKSLEIKVSSFRLVFFTVLAAVLVFYGILHHF
ALACTVLSWGYILLALTLAMFRVVAGRRSKTLEEFEPEPEELDEVEE

Sequences:

>Translated_287_residues
MHSLQRKKIYFLPNVITAFGLSCGLFVIFKMNMTGVGEVTPQILTAVTAILLLAAFADLMDGAVARVIKAESDFGVVFDT
LADAISFGVAPSVIILKSLSVDPSTKLSFLVTMSAIVFSLCGVLRLVRFNVAALATKNNVELAVAHKKHFTGLPIPAAAA
AAVSLNFFLFNPNFEWVKQFPTHSQTWILSVMLMLLGYCMVSRWKFPSVKSLEIKVSSFRLVFFTVLAAVLVFYGILHHF
ALACTVLSWGYILLALTLAMFRVVAGRRSKTLEEFEPEPEELDEVEE
>Mature_287_residues
MHSLQRKKIYFLPNVITAFGLSCGLFVIFKMNMTGVGEVTPQILTAVTAILLLAAFADLMDGAVARVIKAESDFGVVFDT
LADAISFGVAPSVIILKSLSVDPSTKLSFLVTMSAIVFSLCGVLRLVRFNVAALATKNNVELAVAHKKHFTGLPIPAAAA
AAVSLNFFLFNPNFEWVKQFPTHSQTWILSVMLMLLGYCMVSRWKFPSVKSLEIKVSSFRLVFFTVLAAVLVFYGILHHF
ALACTVLSWGYILLALTLAMFRVVAGRRSKTLEEFEPEPEELDEVEE

Specific function: Unknown

COG id: COG1183

COG function: function code I; Phosphatidylserine synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320864, Length=130, Percent_Identity=31.5384615384615, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004533
- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 31592; Mature: 31592

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSLQRKKIYFLPNVITAFGLSCGLFVIFKMNMTGVGEVTPQILTAVTAILLLAAFADLM
CCCCCCCEEEECHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DGAVARVIKAESDFGVVFDTLADAISFGVAPSVIILKSLSVDPSTKLSFLVTMSAIVFSL
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
CGVLRLVRFNVAALATKNNVELAVAHKKHFTGLPIPAAAAAAVSLNFFLFNPNFEWVKQF
HHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCHHHHHHHEEEEEEECCCHHHHHHC
PTHSQTWILSVMLMLLGYCMVSRWKFPSVKSLEIKVSSFRLVFFTVLAAVLVFYGILHHF
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ALACTVLSWGYILLALTLAMFRVVAGRRSKTLEEFEPEPEELDEVEE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHCCC
>Mature Secondary Structure
MHSLQRKKIYFLPNVITAFGLSCGLFVIFKMNMTGVGEVTPQILTAVTAILLLAAFADLM
CCCCCCCEEEECHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DGAVARVIKAESDFGVVFDTLADAISFGVAPSVIILKSLSVDPSTKLSFLVTMSAIVFSL
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
CGVLRLVRFNVAALATKNNVELAVAHKKHFTGLPIPAAAAAAVSLNFFLFNPNFEWVKQF
HHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCHHHHHHHEEEEEEECCCHHHHHHC
PTHSQTWILSVMLMLLGYCMVSRWKFPSVKSLEIKVSSFRLVFFTVLAAVLVFYGILHHF
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ALACTVLSWGYILLALTLAMFRVVAGRRSKTLEEFEPEPEELDEVEE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]