Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446447

Identifier: 46446447

GI number: 46446447

Start: 995142

End: 995972

Strand: Direct

Name: 46446447

Synonym: pc0813

Alternate gene names: NA

Gene position: 995142-995972 (Clockwise)

Preceding gene: 46446443

Following gene: 46446448

Centisome position: 41.22

GC content: 35.86

Gene sequence:

>831_bases
ATGTCAATTCCTGCCAATTTAAGCATCGTTCCTACTGGAAATGGCACACGACTATTAGAAAATAGTGAAATACATACAGA
AGCACAGCAAACATCTGATGTGCAAGTTCCTTATGTATTAAGGATTCCTTTAAATTTAGCTAAGGGTGGTGTAGCTGGTT
TTTTGGCGTACGGAATGGAGCGCGTTCTCGTCTGGATTAAATTTGTTGAATATAGTCAACCCGTGACTTGCTTTCCTTAT
GTTTTGTCTGGAATAGCAAGCGCTGCCATTATTGAATCTGCAAACTTAACACATCTCGTTGCTTTAAAATTAATTGGAGA
GCGTACAATTTATGAAAATTTGCCTGAAAGGAAATCTAACCTTGTAGATAAATTAAGAAAGTATTCGTGGTCAGTTGTTC
GTTTTGGGGAAAACGTAGAAAAAAAAATAGACGAAGTTTTTTCTTATGCGTTAAAAATTCGGACGAAGCAACAAATTTTG
GATTGCCACATAAAAGATAACGATTTAGTTTTTTTAGAAATTTTTCGCCGCGCATTGATTGAACAAGTTAAAGAATCTTT
CGTTACCTCAATTCCTCAAGAGTTGGGAATAGGATTAGTAAAAAAATGTGGCTATATTTTTGTCGGTGGCGAACTCATTT
TAAGTATGCACATTTTACAATTTGTCCATGGCTTAGTAGATAAATTTACGGCTGTTTATAACAAAATACGAGCAGAAGAA
GAAGAAGAATTAGCTAGACAAGCATCTCAGACTTGTGGGCAATCCGACTCTATAAAAGAACAAGTTATAGTAGCGAACAG
TCAGCATATAGAACTGGAGCAAGCAGTTTAG

Upstream 100 bases:

>100_bases
AAAATAACAACTTTTGTTTAATATTTATGTCGTAAAAGATCTTGTTAAACAATTATTTTAATGTTACACTTATTTATTAA
TTTTTTAAAAGGGAGTTAAC

Downstream 100 bases:

>100_bases
CTTATTGTTTAAAATTTTATATCAATCGCTAAATTCATAGTTTAAAATTTTTTACTTAATTTATAGTGCTCAAAAATTTT
ATTGTAAAATTTTTCTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSIPANLSIVPTGNGTRLLENSEIHTEAQQTSDVQVPYVLRIPLNLAKGGVAGFLAYGMERVLVWIKFVEYSQPVTCFPY
VLSGIASAAIIESANLTHLVALKLIGERTIYENLPERKSNLVDKLRKYSWSVVRFGENVEKKIDEVFSYALKIRTKQQIL
DCHIKDNDLVFLEIFRRALIEQVKESFVTSIPQELGIGLVKKCGYIFVGGELILSMHILQFVHGLVDKFTAVYNKIRAEE
EEELARQASQTCGQSDSIKEQVIVANSQHIELEQAV

Sequences:

>Translated_276_residues
MSIPANLSIVPTGNGTRLLENSEIHTEAQQTSDVQVPYVLRIPLNLAKGGVAGFLAYGMERVLVWIKFVEYSQPVTCFPY
VLSGIASAAIIESANLTHLVALKLIGERTIYENLPERKSNLVDKLRKYSWSVVRFGENVEKKIDEVFSYALKIRTKQQIL
DCHIKDNDLVFLEIFRRALIEQVKESFVTSIPQELGIGLVKKCGYIFVGGELILSMHILQFVHGLVDKFTAVYNKIRAEE
EEELARQASQTCGQSDSIKEQVIVANSQHIELEQAV
>Mature_275_residues
SIPANLSIVPTGNGTRLLENSEIHTEAQQTSDVQVPYVLRIPLNLAKGGVAGFLAYGMERVLVWIKFVEYSQPVTCFPYV
LSGIASAAIIESANLTHLVALKLIGERTIYENLPERKSNLVDKLRKYSWSVVRFGENVEKKIDEVFSYALKIRTKQQILD
CHIKDNDLVFLEIFRRALIEQVKESFVTSIPQELGIGLVKKCGYIFVGGELILSMHILQFVHGLVDKFTAVYNKIRAEEE
EELARQASQTCGQSDSIKEQVIVANSQHIELEQAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31009; Mature: 30878

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPANLSIVPTGNGTRLLENSEIHTEAQQTSDVQVPYVLRIPLNLAKGGVAGFLAYGME
CCCCCCCEEEECCCCCEEECCCCHHHHHHHCCCCCCCEEEEECCHHHCCHHHHHHHHHHH
RVLVWIKFVEYSQPVTCFPYVLSGIASAAIIESANLTHLVALKLIGERTIYENLPERKSN
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
LVDKLRKYSWSVVRFGENVEKKIDEVFSYALKIRTKQQILDCHIKDNDLVFLEIFRRALI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHH
EQVKESFVTSIPQELGIGLVKKCGYIFVGGELILSMHILQFVHGLVDKFTAVYNKIRAEE
HHHHHHHHHHCHHHHCCHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EEELARQASQTCGQSDSIKEQVIVANSQHIELEQAV
HHHHHHHHHHHCCCCCCCHHHEEEECCCCEEHHCCC
>Mature Secondary Structure 
SIPANLSIVPTGNGTRLLENSEIHTEAQQTSDVQVPYVLRIPLNLAKGGVAGFLAYGME
CCCCCCEEEECCCCCEEECCCCHHHHHHHCCCCCCCEEEEECCHHHCCHHHHHHHHHHH
RVLVWIKFVEYSQPVTCFPYVLSGIASAAIIESANLTHLVALKLIGERTIYENLPERKSN
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
LVDKLRKYSWSVVRFGENVEKKIDEVFSYALKIRTKQQILDCHIKDNDLVFLEIFRRALI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHH
EQVKESFVTSIPQELGIGLVKKCGYIFVGGELILSMHILQFVHGLVDKFTAVYNKIRAEE
HHHHHHHHHHCHHHHCCHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EEELARQASQTCGQSDSIKEQVIVANSQHIELEQAV
HHHHHHHHHHHCCCCCCCHHHEEEECCCCEEHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA