Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446315
Identifier: 46446315
GI number: 46446315
Start: 829377
End: 830546
Strand: Direct
Name: 46446315
Synonym: pc0681
Alternate gene names: NA
Gene position: 829377-830546 (Clockwise)
Preceding gene: 46446314
Following gene: 46446324
Centisome position: 34.35
GC content: 35.21
Gene sequence:
>1170_bases TTGATGCCTTTTAAGGGAGTTTATCTCTTTTTTTGCGGATTATGCATGGGAATGGCAGATTTGATTCCAGGAATTTCCGG TGGCACGATTGCTTTTATTATGGGATTTTATCAAGCTCTTTTAGAAAGCTTAAAAAGTTTTAATACCGATACTTTAAAAC TTTTATTTACTTTTCAATGGAGTCAATTTCTGAAAAAAACACAGTGGAAATTTTTATTGACACTTGTCTCAGGGATTGCT TGCTCAATAATATTCTTTTCCGGTTTTCTGCATTGGATTCTTTCAAATGAAACTTACCGTATTTATCTTTATTCTCTTTT TCTTGGATTGATTTTAGCTTCTTTTGTTTTTTGTATTCGCCAGGTCAAAAAATGGTCTTGGCTCAAAGTGATCGCTCTGA TTATTGGCTTGAGCATAGCTTACTTTTTAACAGATTTCACTCTTTCAAATAGCAGAGAAGGAAAATATGCTGTCAGAGTA GATTTAGGAAGTTTTCCCGTTGAACTTGTTAATTACGATGGAAAACTGCTTAAAAATTTATCAGCTTCGGATTTAAGTGT ACTAACAGCGAAAAAAAACATTACTCCTACTTCTCTTGTTTTTGATAGGCAAGGTCAAGTTCTCGGAGAAAGCCGGCAAT TTGCTAAAGTTCATCATGTTGGTTTTTTTGATGGTTGGTTAATTATCTGTGGAGCGATTGCTGTATGTGCTTTGCTTTTA CCGGGAGTGTCGGGAAGTTATTTGTTAGTGCTTCTGGGAGTGTATCCATTGATTATCGCCTCATTAGCAGATTTAGTGAC GGGTTTGAAATATTTACATATAGATCAAGAAGCTGTTTTGGTGCTTTTCAATCTTTTGCTTGGGATTGTGATAGGAGGGT TTTGTTTTGCAAGAATAGCAAGCGCACTTTTAAAAAATTATCCAGATATCAGTATCGCTGTTCTTTCAGGTTTCATGATT GGAGCCTTGCGCTCGGTTTGGCCTTTTTGGACTTATAAGTATCTATTAGCTCCTTTAAAGCTTCATAAAGGGCCTCAACT GTTTTTAGAAACTCCTTATTTCCCTTCCTTGTCTTCATTTATTTTGATAAAGTCTATTGTTTGTATAGCCATAGGATTTG GAGTCGTTCTTTTTGTAGAATACCTTTCCACTTTTTCGACTAAAGCTTAA
Upstream 100 bases:
>100_bases CTGGTGCGAGTGTTAAATGGGTTCCTAATGTCATGTGGGTTTTGGCTTTTATGGGTGTTTTATTTGCTGCGTGGTATGTA GCTAAGATCTTGGGAGTTCT
Downstream 100 bases:
>100_bases ATGGCAAAAAAACGAGACACAAGCAAATAAACCTAAAATTTTAATAAAGGACTGTTTGAAGAAAAAGTCCGTGTGCGGGG GCTGTCACACCAGCCATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MMPFKGVYLFFCGLCMGMADLIPGISGGTIAFIMGFYQALLESLKSFNTDTLKLLFTFQWSQFLKKTQWKFLLTLVSGIA CSIIFFSGFLHWILSNETYRIYLYSLFLGLILASFVFCIRQVKKWSWLKVIALIIGLSIAYFLTDFTLSNSREGKYAVRV DLGSFPVELVNYDGKLLKNLSASDLSVLTAKKNITPTSLVFDRQGQVLGESRQFAKVHHVGFFDGWLIICGAIAVCALLL PGVSGSYLLVLLGVYPLIIASLADLVTGLKYLHIDQEAVLVLFNLLLGIVIGGFCFARIASALLKNYPDISIAVLSGFMI GALRSVWPFWTYKYLLAPLKLHKGPQLFLETPYFPSLSSFILIKSIVCIAIGFGVVLFVEYLSTFSTKA
Sequences:
>Translated_389_residues MMPFKGVYLFFCGLCMGMADLIPGISGGTIAFIMGFYQALLESLKSFNTDTLKLLFTFQWSQFLKKTQWKFLLTLVSGIA CSIIFFSGFLHWILSNETYRIYLYSLFLGLILASFVFCIRQVKKWSWLKVIALIIGLSIAYFLTDFTLSNSREGKYAVRV DLGSFPVELVNYDGKLLKNLSASDLSVLTAKKNITPTSLVFDRQGQVLGESRQFAKVHHVGFFDGWLIICGAIAVCALLL PGVSGSYLLVLLGVYPLIIASLADLVTGLKYLHIDQEAVLVLFNLLLGIVIGGFCFARIASALLKNYPDISIAVLSGFMI GALRSVWPFWTYKYLLAPLKLHKGPQLFLETPYFPSLSSFILIKSIVCIAIGFGVVLFVEYLSTFSTKA >Mature_389_residues MMPFKGVYLFFCGLCMGMADLIPGISGGTIAFIMGFYQALLESLKSFNTDTLKLLFTFQWSQFLKKTQWKFLLTLVSGIA CSIIFFSGFLHWILSNETYRIYLYSLFLGLILASFVFCIRQVKKWSWLKVIALIIGLSIAYFLTDFTLSNSREGKYAVRV DLGSFPVELVNYDGKLLKNLSASDLSVLTAKKNITPTSLVFDRQGQVLGESRQFAKVHHVGFFDGWLIICGAIAVCALLL PGVSGSYLLVLLGVYPLIIASLADLVTGLKYLHIDQEAVLVLFNLLLGIVIGGFCFARIASALLKNYPDISIAVLSGFMI GALRSVWPFWTYKYLLAPLKLHKGPQLFLETPYFPSLSSFILIKSIVCIAIGFGVVLFVEYLSTFSTKA
Specific function: Unknown
COG id: COG2035
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43265; Mature: 43265
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPFKGVYLFFCGLCMGMADLIPGISGGTIAFIMGFYQALLESLKSFNTDTLKLLFTFQW CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SQFLKKTQWKFLLTLVSGIACSIIFFSGFLHWILSNETYRIYLYSLFLGLILASFVFCIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QVKKWSWLKVIALIIGLSIAYFLTDFTLSNSREGKYAVRVDLGSFPVELVNYDGKLLKNL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHCCCHHHHHCC SASDLSVLTAKKNITPTSLVFDRQGQVLGESRQFAKVHHVGFFDGWLIICGAIAVCALLL CCCHHHHEEECCCCCCHHEEECCCCCHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH PGVSGSYLLVLLGVYPLIIASLADLVTGLKYLHIDQEAVLVLFNLLLGIVIGGFCFARIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SALLKNYPDISIAVLSGFMIGALRSVWPFWTYKYLLAPLKLHKGPQLFLETPYFPSLSSF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHH ILIKSIVCIAIGFGVVLFVEYLSTFSTKA HHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMPFKGVYLFFCGLCMGMADLIPGISGGTIAFIMGFYQALLESLKSFNTDTLKLLFTFQW CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SQFLKKTQWKFLLTLVSGIACSIIFFSGFLHWILSNETYRIYLYSLFLGLILASFVFCIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QVKKWSWLKVIALIIGLSIAYFLTDFTLSNSREGKYAVRVDLGSFPVELVNYDGKLLKNL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHCCCHHHHHCC SASDLSVLTAKKNITPTSLVFDRQGQVLGESRQFAKVHHVGFFDGWLIICGAIAVCALLL CCCHHHHEEECCCCCCHHEEECCCCCHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH PGVSGSYLLVLLGVYPLIIASLADLVTGLKYLHIDQEAVLVLFNLLLGIVIGGFCFARIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SALLKNYPDISIAVLSGFMIGALRSVWPFWTYKYLLAPLKLHKGPQLFLETPYFPSLSSF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHH ILIKSIVCIAIGFGVVLFVEYLSTFSTKA HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA