Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446314

Identifier: 46446314

GI number: 46446314

Start: 828892

End: 829380

Strand: Direct

Name: 46446314

Synonym: pc0680

Alternate gene names: NA

Gene position: 828892-829380 (Clockwise)

Preceding gene: 46446310

Following gene: 46446315

Centisome position: 34.33

GC content: 35.79

Gene sequence:

>489_bases
ATGTATAAGTTTATGCTTGAGTTTAGCCCAAATGAGGAGAAAAGAGTGGAACGTAAAAAAAATAGCTTGGAATTAGACCC
AGTTCTCCAAAAAGAGATCAAAGAAATTGGAGAGCAATTAAGGCAAAAACGAAAACAATTAAAGATTTCTTTAAAAGAAG
CTGAGAATGCAACTTCAATCAGAATGGTCTATTTACAAGCTTTAGAAGAAGGGGAGATGGAAAAATTAATTTCGCCCGTA
TATGCCCAAGGTTTTTTTAAACAATATGCTTCTTTTTTAGGAATTGATGGGGAATCTATTATCAGGGAAAAACCCTATAT
TTTTAATAGACCAGAAGCACAGGAATTTGCTTATGGAATTGGGACTTTAGAGGTCAGAAGTAACCCTGGTGCGAGTGTTA
AATGGGTTCCTAATGTCATGTGGGTTTTGGCTTTTATGGGTGTTTTATTTGCTGCGTGGTATGTAGCTAAGATCTTGGGA
GTTCTTTGA

Upstream 100 bases:

>100_bases
AAACTTTATCACATTTAAATTCTACTTGCTATCTAAATCCCATTTGAACTCATCCATTTTTTAATTTTAATGGATTTAGC
AGGAAGTCTAATGTAAAATC

Downstream 100 bases:

>100_bases
TGCCTTTTAAGGGAGTTTATCTCTTTTTTTGCGGATTATGCATGGGAATGGCAGATTTGATTCCAGGAATTTCCGGTGGC
ACGATTGCTTTTATTATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MYKFMLEFSPNEEKRVERKKNSLELDPVLQKEIKEIGEQLRQKRKQLKISLKEAENATSIRMVYLQALEEGEMEKLISPV
YAQGFFKQYASFLGIDGESIIREKPYIFNRPEAQEFAYGIGTLEVRSNPGASVKWVPNVMWVLAFMGVLFAAWYVAKILG
VL

Sequences:

>Translated_162_residues
MYKFMLEFSPNEEKRVERKKNSLELDPVLQKEIKEIGEQLRQKRKQLKISLKEAENATSIRMVYLQALEEGEMEKLISPV
YAQGFFKQYASFLGIDGESIIREKPYIFNRPEAQEFAYGIGTLEVRSNPGASVKWVPNVMWVLAFMGVLFAAWYVAKILG
VL
>Mature_162_residues
MYKFMLEFSPNEEKRVERKKNSLELDPVLQKEIKEIGEQLRQKRKQLKISLKEAENATSIRMVYLQALEEGEMEKLISPV
YAQGFFKQYASFLGIDGESIIREKPYIFNRPEAQEFAYGIGTLEVRSNPGASVKWVPNVMWVLAFMGVLFAAWYVAKILG
VL

Specific function: Unknown

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18730; Mature: 18730

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKFMLEFSPNEEKRVERKKNSLELDPVLQKEIKEIGEQLRQKRKQLKISLKEAENATSI
CCEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RMVYLQALEEGEMEKLISPVYAQGFFKQYASFLGIDGESIIREKPYIFNRPEAQEFAYGI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHCC
GTLEVRSNPGASVKWVPNVMWVLAFMGVLFAAWYVAKILGVL
CEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYKFMLEFSPNEEKRVERKKNSLELDPVLQKEIKEIGEQLRQKRKQLKISLKEAENATSI
CCEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RMVYLQALEEGEMEKLISPVYAQGFFKQYASFLGIDGESIIREKPYIFNRPEAQEFAYGI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHCC
GTLEVRSNPGASVKWVPNVMWVLAFMGVLFAAWYVAKILGVL
CEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA