Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446281
Identifier: 46446281
GI number: 46446281
Start: 795065
End: 795748
Strand: Direct
Name: 46446281
Synonym: pc0647
Alternate gene names: NA
Gene position: 795065-795748 (Clockwise)
Preceding gene: 46446274
Following gene: 46446282
Centisome position: 32.93
GC content: 31.73
Gene sequence:
>684_bases ATGTACAAAAATACGACGTATAAAGAAAAATTTACCCTTCTAAAAGAGTTGTTGCCAAACGTGATTGACTCAGTAAAAAA AGATTTGAAAAATGAACATTTAAAAAAAGACTTTTATTTTGTCAAAAAGTTTTTAGGGACAAAAAACCTTAATAAGTTGA CCACAGAAGAGTTAACAGAGGCTTATCAAAAAGCCATTGATGATGAGGAAAAAGGAGAAGAATTGGCAGAATTTGTGACC TCACGTTGGCTGCTTAAAAATAGTGAGCTGTATGAATTCTTTGAGAGTCGTTTAACTGAAATTAGTCCAAATTTCACTGA TTTGGAAGAATTATCTATTTCTCAAGCTCAGCCTTTAGTAGATAATGCTGTCAGTCAGTTTGGGGCACTTAAAACGTACT TATTCGCTGTTTTAAACTCAGTTGTATTTCCGAAAGAAATTTTTCAAAAACTTGAGCAATTATCCCAAAAGCAAGATGTG CAAGAAAAAGAACAAGCTCAATTAAATTTAGAGAAATTGAACGCAGATACAATGAGAAAAACTTTTACTGCTGAAATGGC TCGAGTCACAGATAAGTATGAAAAAAAATTAGCTGGAATGCAAAAAAAGTATATTGTTGATATGGAAAGTTTAAAAAAAC AAATTTCACAGCTTCAAAAGAAACTGCAAGGGAAAGAAGCTTAA
Upstream 100 bases:
>100_bases GCCATGCTAGAGTTTTTTTTCTACGTGCCAATCCAAATTTCCAATAACGAAAATCTAATTGTTGTGAAGGAAATAAGAAA AACTTAACAATAGGTTAATT
Downstream 100 bases:
>100_bases TGAGTTTTCCTTGGACAATTCTCACGCAAAACGATGACGAACGTTTTATGTTGGAAGCCTTAAAAGAAGCGTGGAAGGCA TTTAAAGCAGATGAAGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MYKNTTYKEKFTLLKELLPNVIDSVKKDLKNEHLKKDFYFVKKFLGTKNLNKLTTEELTEAYQKAIDDEEKGEELAEFVT SRWLLKNSELYEFFESRLTEISPNFTDLEELSISQAQPLVDNAVSQFGALKTYLFAVLNSVVFPKEIFQKLEQLSQKQDV QEKEQAQLNLEKLNADTMRKTFTAEMARVTDKYEKKLAGMQKKYIVDMESLKKQISQLQKKLQGKEA
Sequences:
>Translated_227_residues MYKNTTYKEKFTLLKELLPNVIDSVKKDLKNEHLKKDFYFVKKFLGTKNLNKLTTEELTEAYQKAIDDEEKGEELAEFVT SRWLLKNSELYEFFESRLTEISPNFTDLEELSISQAQPLVDNAVSQFGALKTYLFAVLNSVVFPKEIFQKLEQLSQKQDV QEKEQAQLNLEKLNADTMRKTFTAEMARVTDKYEKKLAGMQKKYIVDMESLKKQISQLQKKLQGKEA >Mature_227_residues MYKNTTYKEKFTLLKELLPNVIDSVKKDLKNEHLKKDFYFVKKFLGTKNLNKLTTEELTEAYQKAIDDEEKGEELAEFVT SRWLLKNSELYEFFESRLTEISPNFTDLEELSISQAQPLVDNAVSQFGALKTYLFAVLNSVVFPKEIFQKLEQLSQKQDV QEKEQAQLNLEKLNADTMRKTFTAEMARVTDKYEKKLAGMQKKYIVDMESLKKQISQLQKKLQGKEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26535; Mature: 26535
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKNTTYKEKFTLLKELLPNVIDSVKKDLKNEHLKKDFYFVKKFLGTKNLNKLTTEELTE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AYQKAIDDEEKGEELAEFVTSRWLLKNSELYEFFESRLTEISPNFTDLEELSISQAQPLV HHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHH DNAVSQFGALKTYLFAVLNSVVFPKEIFQKLEQLSQKQDVQEKEQAQLNLEKLNADTMRK HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFTAEMARVTDKYEKKLAGMQKKYIVDMESLKKQISQLQKKLQGKEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MYKNTTYKEKFTLLKELLPNVIDSVKKDLKNEHLKKDFYFVKKFLGTKNLNKLTTEELTE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AYQKAIDDEEKGEELAEFVTSRWLLKNSELYEFFESRLTEISPNFTDLEELSISQAQPLV HHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHH DNAVSQFGALKTYLFAVLNSVVFPKEIFQKLEQLSQKQDVQEKEQAQLNLEKLNADTMRK HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFTAEMARVTDKYEKKLAGMQKKYIVDMESLKKQISQLQKKLQGKEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA