Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446260

Identifier: 46446260

GI number: 46446260

Start: 766702

End: 767376

Strand: Direct

Name: 46446260

Synonym: pc0626

Alternate gene names: NA

Gene position: 766702-767376 (Clockwise)

Preceding gene: 46446259

Following gene: 46446261

Centisome position: 31.75

GC content: 38.37

Gene sequence:

>675_bases
ATGACTTCAAAAACAACCCATACAAAAGATTTTTTCGCAGGAGCTGTAATTGGTAGTTTACTAGGTGGTGTAACTGCACT
TCTTACAGCGCCAAAAGCAGGAAAAAGGTTACGTCAAGAGATGAATGATTTTTACAGCGATGTATCAGATCAGTCTCATG
ATATTGCAGATAATATTTCCAAAAAAACTAGATCTGTCATGAAATCTTTTGGTTCTCATTCCAACGAATTAGCGGATAAA
GCTAAATGTTTATATTGCGGAGTAAAAAAAATGATGGGATGTGAACAGGAAGAGGAAGAAGAAACCTGCACAAAAGATTT
AATGATGGGCGGGGTTATTGGTGGAGTATTAGGTGCTGTGGTAGGGCTTTTGCTTGCTCCTAAATCTGGTAGTGAGCTGA
GAGATGATATTGTCGAAGGATGTGAAAAAGTGAGTGATAAAACTCGTGGTATGGCAGATCAATTTTCCAAAAATGGAAAA
AAAATGGCCGCAACTGCGTATTCGAAAACCAACAAATGGCTTGAGTTGGCAAAGGGCATAGTCCATGAGTGGACTGATGA
AGCAGAAGAAAAAAGCGAAAATTTTACCAGTCAAGCTAAACATCGTATGGATGATTTAATGGACTGGGCTGCTTTAGGTT
ATCGTGTTTGGCAAGGTATTAACAAAAAACGATAA

Upstream 100 bases:

>100_bases
TAGGGATGAAAGCCCCGAGTTACCATTAGTCGCAGAAATTCTTGAATTAGCAAGCCAGGGCTGCCGCCTATGGCAAAATC
TAAAGAAAAGGAGATAATCG

Downstream 100 bases:

>100_bases
ATTCTAGCAAGTAAAGATCAAGGATGGTTCCTATGAATAAAAAGATCCTTTTAGGAAGCCTGGCTGGGGGCTTTGTCGGA
TTGACAACAGCTTTATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTSKTTHTKDFFAGAVIGSLLGGVTALLTAPKAGKRLRQEMNDFYSDVSDQSHDIADNISKKTRSVMKSFGSHSNELADK
AKCLYCGVKKMMGCEQEEEEETCTKDLMMGGVIGGVLGAVVGLLLAPKSGSELRDDIVEGCEKVSDKTRGMADQFSKNGK
KMAATAYSKTNKWLELAKGIVHEWTDEAEEKSENFTSQAKHRMDDLMDWAALGYRVWQGINKKR

Sequences:

>Translated_224_residues
MTSKTTHTKDFFAGAVIGSLLGGVTALLTAPKAGKRLRQEMNDFYSDVSDQSHDIADNISKKTRSVMKSFGSHSNELADK
AKCLYCGVKKMMGCEQEEEEETCTKDLMMGGVIGGVLGAVVGLLLAPKSGSELRDDIVEGCEKVSDKTRGMADQFSKNGK
KMAATAYSKTNKWLELAKGIVHEWTDEAEEKSENFTSQAKHRMDDLMDWAALGYRVWQGINKKR
>Mature_223_residues
TSKTTHTKDFFAGAVIGSLLGGVTALLTAPKAGKRLRQEMNDFYSDVSDQSHDIADNISKKTRSVMKSFGSHSNELADKA
KCLYCGVKKMMGCEQEEEEETCTKDLMMGGVIGGVLGAVVGLLLAPKSGSELRDDIVEGCEKVSDKTRGMADQFSKNGKK
MAATAYSKTNKWLELAKGIVHEWTDEAEEKSENFTSQAKHRMDDLMDWAALGYRVWQGINKKR

Specific function: Unknown

COG id: COG4980

COG function: function code R; Gas vesicle protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24644; Mature: 24513

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKTTHTKDFFAGAVIGSLLGGVTALLTAPKAGKRLRQEMNDFYSDVSDQSHDIADNIS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KKTRSVMKSFGSHSNELADKAKCLYCGVKKMMGCEQEEEEETCTKDLMMGGVIGGVLGAV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VGLLLAPKSGSELRDDIVEGCEKVSDKTRGMADQFSKNGKKMAATAYSKTNKWLELAKGI
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VHEWTDEAEEKSENFTSQAKHRMDDLMDWAALGYRVWQGINKKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSKTTHTKDFFAGAVIGSLLGGVTALLTAPKAGKRLRQEMNDFYSDVSDQSHDIADNIS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KKTRSVMKSFGSHSNELADKAKCLYCGVKKMMGCEQEEEEETCTKDLMMGGVIGGVLGAV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VGLLLAPKSGSELRDDIVEGCEKVSDKTRGMADQFSKNGKKMAATAYSKTNKWLELAKGI
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VHEWTDEAEEKSENFTSQAKHRMDDLMDWAALGYRVWQGINKKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA