Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446259

Identifier: 46446259

GI number: 46446259

Start: 766207

End: 766698

Strand: Direct

Name: 46446259

Synonym: pc0625

Alternate gene names: NA

Gene position: 766207-766698 (Clockwise)

Preceding gene: 46446256

Following gene: 46446260

Centisome position: 31.73

GC content: 33.13

Gene sequence:

>492_bases
TTGGAGAAAATTATGGTTATTGAAATAAGTGTAGCAGCGATAGCTATAGCTTTTATTTTTTTGGTGATTTATCTTGTATG
CTTGTGTAAGTCGGCGCGTATTATGTTAAATCAACTTAATCATTTAATTATTGATGTTCGTCAACAATTAGATGGTATAA
AAGAAGAGGCAAAAAAAACGATTGAAAATACAAATCAAATTAGTTTGGATTTAAAGCATAAAATTGAGGCTTTTAATTCC
TTGTTTCAATCGTTGGCAAATATTGGAGAGGCTTTAGAATATAAAGCAGAGGCTTTTAGACAAAAGACACTTCGTTTCTA
TAGTGGCCGTGCAAAAGAATTCTTACGTTCTTCTTTTAGAAACGAAACAAGTGAAGAATTACCTTTCAAAAAAAATAGGG
ATGAAAGCCCCGAGTTACCATTAGTCGCAGAAATTCTTGAATTAGCAAGCCAGGGCTGCCGCCTATGGCAAAATCTAAAG
AAAAGGAGATAA

Upstream 100 bases:

>100_bases
ACTAGCAAATGCGAAAGTTATTCTTTGACTTTTAAGCTGGAGATGAGCTCTTCGCTAGACAAAAATCAGATATTTTCGGT
GATTTTGAAAGAATCAAGAT

Downstream 100 bases:

>100_bases
TCGATGACTTCAAAAACAACCCATACAAAAGATTTTTTCGCAGGAGCTGTAATTGGTAGTTTACTAGGTGGTGTAACTGC
ACTTCTTACAGCGCCAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MEKIMVIEISVAAIAIAFIFLVIYLVCLCKSARIMLNQLNHLIIDVRQQLDGIKEEAKKTIENTNQISLDLKHKIEAFNS
LFQSLANIGEALEYKAEAFRQKTLRFYSGRAKEFLRSSFRNETSEELPFKKNRDESPELPLVAEILELASQGCRLWQNLK
KRR

Sequences:

>Translated_163_residues
MEKIMVIEISVAAIAIAFIFLVIYLVCLCKSARIMLNQLNHLIIDVRQQLDGIKEEAKKTIENTNQISLDLKHKIEAFNS
LFQSLANIGEALEYKAEAFRQKTLRFYSGRAKEFLRSSFRNETSEELPFKKNRDESPELPLVAEILELASQGCRLWQNLK
KRR
>Mature_163_residues
MEKIMVIEISVAAIAIAFIFLVIYLVCLCKSARIMLNQLNHLIIDVRQQLDGIKEEAKKTIENTNQISLDLKHKIEAFNS
LFQSLANIGEALEYKAEAFRQKTLRFYSGRAKEFLRSSFRNETSEELPFKKNRDESPELPLVAEILELASQGCRLWQNLK
KRR

Specific function: Unknown

COG id: COG4768

COG function: function code R; Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18874; Mature: 18874

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIMVIEISVAAIAIAFIFLVIYLVCLCKSARIMLNQLNHLIIDVRQQLDGIKEEAKKT
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IENTNQISLDLKHKIEAFNSLFQSLANIGEALEYKAEAFRQKTLRFYSGRAKEFLRSSFR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
NETSEELPFKKNRDESPELPLVAEILELASQGCRLWQNLKKRR
CCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKIMVIEISVAAIAIAFIFLVIYLVCLCKSARIMLNQLNHLIIDVRQQLDGIKEEAKKT
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IENTNQISLDLKHKIEAFNSLFQSLANIGEALEYKAEAFRQKTLRFYSGRAKEFLRSSFR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
NETSEELPFKKNRDESPELPLVAEILELASQGCRLWQNLKKRR
CCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA