Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446259
Identifier: 46446259
GI number: 46446259
Start: 766207
End: 766698
Strand: Direct
Name: 46446259
Synonym: pc0625
Alternate gene names: NA
Gene position: 766207-766698 (Clockwise)
Preceding gene: 46446256
Following gene: 46446260
Centisome position: 31.73
GC content: 33.13
Gene sequence:
>492_bases TTGGAGAAAATTATGGTTATTGAAATAAGTGTAGCAGCGATAGCTATAGCTTTTATTTTTTTGGTGATTTATCTTGTATG CTTGTGTAAGTCGGCGCGTATTATGTTAAATCAACTTAATCATTTAATTATTGATGTTCGTCAACAATTAGATGGTATAA AAGAAGAGGCAAAAAAAACGATTGAAAATACAAATCAAATTAGTTTGGATTTAAAGCATAAAATTGAGGCTTTTAATTCC TTGTTTCAATCGTTGGCAAATATTGGAGAGGCTTTAGAATATAAAGCAGAGGCTTTTAGACAAAAGACACTTCGTTTCTA TAGTGGCCGTGCAAAAGAATTCTTACGTTCTTCTTTTAGAAACGAAACAAGTGAAGAATTACCTTTCAAAAAAAATAGGG ATGAAAGCCCCGAGTTACCATTAGTCGCAGAAATTCTTGAATTAGCAAGCCAGGGCTGCCGCCTATGGCAAAATCTAAAG AAAAGGAGATAA
Upstream 100 bases:
>100_bases ACTAGCAAATGCGAAAGTTATTCTTTGACTTTTAAGCTGGAGATGAGCTCTTCGCTAGACAAAAATCAGATATTTTCGGT GATTTTGAAAGAATCAAGAT
Downstream 100 bases:
>100_bases TCGATGACTTCAAAAACAACCCATACAAAAGATTTTTTCGCAGGAGCTGTAATTGGTAGTTTACTAGGTGGTGTAACTGC ACTTCTTACAGCGCCAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MEKIMVIEISVAAIAIAFIFLVIYLVCLCKSARIMLNQLNHLIIDVRQQLDGIKEEAKKTIENTNQISLDLKHKIEAFNS LFQSLANIGEALEYKAEAFRQKTLRFYSGRAKEFLRSSFRNETSEELPFKKNRDESPELPLVAEILELASQGCRLWQNLK KRR
Sequences:
>Translated_163_residues MEKIMVIEISVAAIAIAFIFLVIYLVCLCKSARIMLNQLNHLIIDVRQQLDGIKEEAKKTIENTNQISLDLKHKIEAFNS LFQSLANIGEALEYKAEAFRQKTLRFYSGRAKEFLRSSFRNETSEELPFKKNRDESPELPLVAEILELASQGCRLWQNLK KRR >Mature_163_residues MEKIMVIEISVAAIAIAFIFLVIYLVCLCKSARIMLNQLNHLIIDVRQQLDGIKEEAKKTIENTNQISLDLKHKIEAFNS LFQSLANIGEALEYKAEAFRQKTLRFYSGRAKEFLRSSFRNETSEELPFKKNRDESPELPLVAEILELASQGCRLWQNLK KRR
Specific function: Unknown
COG id: COG4768
COG function: function code R; Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18874; Mature: 18874
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKIMVIEISVAAIAIAFIFLVIYLVCLCKSARIMLNQLNHLIIDVRQQLDGIKEEAKKT CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IENTNQISLDLKHKIEAFNSLFQSLANIGEALEYKAEAFRQKTLRFYSGRAKEFLRSSFR HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC NETSEELPFKKNRDESPELPLVAEILELASQGCRLWQNLKKRR CCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKIMVIEISVAAIAIAFIFLVIYLVCLCKSARIMLNQLNHLIIDVRQQLDGIKEEAKKT CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IENTNQISLDLKHKIEAFNSLFQSLANIGEALEYKAEAFRQKTLRFYSGRAKEFLRSSFR HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC NETSEELPFKKNRDESPELPLVAEILELASQGCRLWQNLKKRR CCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA