Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46446246

Identifier: 46446246

GI number: 46446246

Start: 753393

End: 753650

Strand: Direct

Name: 46446246

Synonym: pc0612

Alternate gene names: NA

Gene position: 753393-753650 (Clockwise)

Preceding gene: 46446242

Following gene: 46446247

Centisome position: 31.2

GC content: 31.78

Gene sequence:

>258_bases
ATGATTAAGAATGTTTTATCTCGATGGAATCCCTTAAATATATTTGGGACAGAAGTTGAGTATCAAGATTTACTTCATCA
ACCTCTTGAATCTGACGAAACGTTGATACAAGATAGTCGTGGTTGCATCCATCGTTTAAAAGTTTCTTCCAAACACTCTA
CCTTTTGGGAGACAGTTCTTTATTGGATTCAAATTCACCTTAATAAAAAAGGTCATTTGGATGCAATTGATAAATTATTA
TCTTCTTTTGATTCTTAA

Upstream 100 bases:

>100_bases
TGACATGAAATAACTTTATGGGAAATTTATGATTATTTTATCAAAAAATAGGTTTAAGAGATTATTCTAGAATTAGCTTA
CTATACGATATAGGCCATCC

Downstream 100 bases:

>100_bases
ACCCTTCAATGTTCTTTTTTAGCAGCTAAAGAATTTAAAGAAATAAAATCTAATCTAGAAAGTTTAAAATCATTGAAAAA
TGATTATCATTTTCGACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MIKNVLSRWNPLNIFGTEVEYQDLLHQPLESDETLIQDSRGCIHRLKVSSKHSTFWETVLYWIQIHLNKKGHLDAIDKLL
SSFDS

Sequences:

>Translated_85_residues
MIKNVLSRWNPLNIFGTEVEYQDLLHQPLESDETLIQDSRGCIHRLKVSSKHSTFWETVLYWIQIHLNKKGHLDAIDKLL
SSFDS
>Mature_85_residues
MIKNVLSRWNPLNIFGTEVEYQDLLHQPLESDETLIQDSRGCIHRLKVSSKHSTFWETVLYWIQIHLNKKGHLDAIDKLL
SSFDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9978; Mature: 9978

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNVLSRWNPLNIFGTEVEYQDLLHQPLESDETLIQDSRGCIHRLKVSSKHSTFWETVL
CCHHHHHCCCCCCEEECCCHHHHHHHCCCCCCHHHHHHCHHHHHHHHCCCCCHHHHHHHH
YWIQIHLNKKGHLDAIDKLLSSFDS
HHHHHHCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MIKNVLSRWNPLNIFGTEVEYQDLLHQPLESDETLIQDSRGCIHRLKVSSKHSTFWETVL
CCHHHHHCCCCCCEEECCCHHHHHHHCCCCCCHHHHHHCHHHHHHHHCCCCCHHHHHHHH
YWIQIHLNKKGHLDAIDKLLSSFDS
HHHHHHCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA