Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446242
Identifier: 46446242
GI number: 46446242
Start: 750367
End: 750549
Strand: Direct
Name: 46446242
Synonym: pc0608
Alternate gene names: NA
Gene position: 750367-750549 (Clockwise)
Preceding gene: 46446240
Following gene: 46446246
Centisome position: 31.08
GC content: 32.79
Gene sequence:
>183_bases TTGGCAGATACAGCTCTTCCGGGAAAAAAAATATTTCGGCAAGAAGTAGCAAGCTATTTGATGCAAAAATTTGGAGTAAA AGAAGTTTTAGCATTGTTATCTAATACTGATCCTAAAACAATCGATTTTAAACAAGAAGAAGCAAGCTTAAATCAGCAAC TTAAAGAAGTTTGTGGAGGATAA
Upstream 100 bases:
>100_bases ATCTCTCACTTTTACCAGAAAAAAAGTCCTCAAATTTAAGCAATAATTGAAAGGAATTAATTGATGATTTGATCAGATAT CAGATATCAAGGAACAATTT
Downstream 100 bases:
>100_bases AGATCATCTCCTTCTACCCACATTTTAATATCATTTCTTGGAAGAAATTGAATTAAATTTAAAAGGCTTAGAAATTGGCA AGTTTTTAATTTACAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MADTALPGKKIFRQEVASYLMQKFGVKEVLALLSNTDPKTIDFKQEEASLNQQLKEVCGG
Sequences:
>Translated_60_residues MADTALPGKKIFRQEVASYLMQKFGVKEVLALLSNTDPKTIDFKQEEASLNQQLKEVCGG >Mature_59_residues ADTALPGKKIFRQEVASYLMQKFGVKEVLALLSNTDPKTIDFKQEEASLNQQLKEVCGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6659; Mature: 6528
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTALPGKKIFRQEVASYLMQKFGVKEVLALLSNTDPKTIDFKQEEASLNQQLKEVCGG CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure ADTALPGKKIFRQEVASYLMQKFGVKEVLALLSNTDPKTIDFKQEEASLNQQLKEVCGG CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA