Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446209

Identifier: 46446209

GI number: 46446209

Start: 708990

End: 710018

Strand: Direct

Name: 46446209

Synonym: pc0575

Alternate gene names: NA

Gene position: 708990-710018 (Clockwise)

Preceding gene: 46446208

Following gene: 46446210

Centisome position: 29.36

GC content: 38.39

Gene sequence:

>1029_bases
ATGATGCGCTACATCAAGCCTTGGATCTTTTTGTTGAGTTTAAATTCGGCATTTCTTTTAGCAGAAAATTTTGATAAAAA
AATGAATGATAGCAGCAAAAGTGCAACAATTTCTGAAACGATTGAAGCTTCGAAAGAACTTGATAATTATCGAGAGGCTC
ATCCAGAAATTTACAATGAAAACTGCTGGTCATCAGTAGAACCAGAAACAGATGCTGAATATGCGAGATCTCATAATCTT
TGGGGAATTTGGCTGCCTGAGGGCCCTCCAATGTTTCGCCCCTTTTTGGCGGATCCCCGCCAATTAACATATTCAGTAGG
TTGGCGTTTTAATGACCGAGCAACGGTTAAAAACGTGATTGATGTATCATTTGGGGATACATTACCTATTTTTCGTTGGT
GTGACATTTGGAAGTTTAGAGGAGACCTTCAATTAGAGTTAGAAGGGGGAGTCTGGGCAATTTTTGATCCTTTGCATAAA
TCTGCTCCACTTATTGACGCTGACTATTATGTGGGTATTCCCATTACCTATGCTTTTGGTAATTGGGCTCTTCGGTTAAG
AGGATATCACATTTCTACTCATATTGGTGATGAGTTTTTGATTAATCATCCTCACTTTGATCGGCGTAATCCAAGTATTG
AAGCCATCGATTTGTCTGTTTCTTGGCAAAAAGAACAGATTCGATTATATGGAGTACTGGGTTGGGTTTGTTGCCAAGAT
GATTCTTTTAGAGTAGGGCCTTTCTACCTTGAAACAGGATTAGAATTGAGACTTTCTCAGTTGGGTTATCGTGACCACTG
CAATCGTTTGTATAGCGAACCTTTTTTTGGTATGCACTTCCGTTATCAATCTCATTTTAAAAAACATATCAACCAAACTT
ATGTGCTAGGATGGGAATGGGGAAAAGTTTCAGGTATTCGACGTAAATTTAGACTTTTCTTAGAGTATCATGATGGATAT
TCTTTGGATGGGCAGTTTTGTAAACGTGCCACTCATTATTTAAGTTTCAGAGGCTCATACGGATTTTAA

Upstream 100 bases:

>100_bases
GCTATCCCTAGATTTTTTTGAATAAAAAACAATAGAGACTTAAAGGGGATTTTGTAAAATCTATTTTAAGGAATTCTTAA
TAACATGCGTGAGAGTAACT

Downstream 100 bases:

>100_bases
TCTATGAATCCAGAAGGTTATAACGGCCCTTTTGATAAAGATACCATTGAAACAAAATCTCCTTCGATTAATCCTTTATT
AACTGAAGGAGATTTTATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MMRYIKPWIFLLSLNSAFLLAENFDKKMNDSSKSATISETIEASKELDNYREAHPEIYNENCWSSVEPETDAEYARSHNL
WGIWLPEGPPMFRPFLADPRQLTYSVGWRFNDRATVKNVIDVSFGDTLPIFRWCDIWKFRGDLQLELEGGVWAIFDPLHK
SAPLIDADYYVGIPITYAFGNWALRLRGYHISTHIGDEFLINHPHFDRRNPSIEAIDLSVSWQKEQIRLYGVLGWVCCQD
DSFRVGPFYLETGLELRLSQLGYRDHCNRLYSEPFFGMHFRYQSHFKKHINQTYVLGWEWGKVSGIRRKFRLFLEYHDGY
SLDGQFCKRATHYLSFRGSYGF

Sequences:

>Translated_342_residues
MMRYIKPWIFLLSLNSAFLLAENFDKKMNDSSKSATISETIEASKELDNYREAHPEIYNENCWSSVEPETDAEYARSHNL
WGIWLPEGPPMFRPFLADPRQLTYSVGWRFNDRATVKNVIDVSFGDTLPIFRWCDIWKFRGDLQLELEGGVWAIFDPLHK
SAPLIDADYYVGIPITYAFGNWALRLRGYHISTHIGDEFLINHPHFDRRNPSIEAIDLSVSWQKEQIRLYGVLGWVCCQD
DSFRVGPFYLETGLELRLSQLGYRDHCNRLYSEPFFGMHFRYQSHFKKHINQTYVLGWEWGKVSGIRRKFRLFLEYHDGY
SLDGQFCKRATHYLSFRGSYGF
>Mature_342_residues
MMRYIKPWIFLLSLNSAFLLAENFDKKMNDSSKSATISETIEASKELDNYREAHPEIYNENCWSSVEPETDAEYARSHNL
WGIWLPEGPPMFRPFLADPRQLTYSVGWRFNDRATVKNVIDVSFGDTLPIFRWCDIWKFRGDLQLELEGGVWAIFDPLHK
SAPLIDADYYVGIPITYAFGNWALRLRGYHISTHIGDEFLINHPHFDRRNPSIEAIDLSVSWQKEQIRLYGVLGWVCCQD
DSFRVGPFYLETGLELRLSQLGYRDHCNRLYSEPFFGMHFRYQSHFKKHINQTYVLGWEWGKVSGIRRKFRLFLEYHDGY
SLDGQFCKRATHYLSFRGSYGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40300; Mature: 40300

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS00256 AKH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRYIKPWIFLLSLNSAFLLAENFDKKMNDSSKSATISETIEASKELDNYREAHPEIYNE
CCCHHCCEEEEEECCCEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
NCWSSVEPETDAEYARSHNLWGIWLPEGPPMFRPFLADPRQLTYSVGWRFNDRATVKNVI
CCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEECEEECCCCCCCCEE
DVSFGDTLPIFRWCDIWKFRGDLQLELEGGVWAIFDPLHKSAPLIDADYYVGIPITYAFG
EECCCCCCCHHHHHHHEEECCCEEEEECCCEEEEECCCCCCCCEEECCEEECCEEEEEEC
NWALRLRGYHISTHIGDEFLINHPHFDRRNPSIEAIDLSVSWQKEQIRLYGVLGWVCCQD
CEEEEEEEEEEEEECCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEECC
DSFRVGPFYLETGLELRLSQLGYRDHCNRLYSEPFFGMHFRYQSHFKKHINQTYVLGWEW
CCEEECCEEEECCCHHHHHHCCCHHHHHHHHCCCCCEEEEHHHHHHHHHCCCEEEEEECC
GKVSGIRRKFRLFLEYHDGYSLDGQFCKRATHYLSFRGSYGF
CCHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure
MMRYIKPWIFLLSLNSAFLLAENFDKKMNDSSKSATISETIEASKELDNYREAHPEIYNE
CCCHHCCEEEEEECCCEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
NCWSSVEPETDAEYARSHNLWGIWLPEGPPMFRPFLADPRQLTYSVGWRFNDRATVKNVI
CCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEECEEECCCCCCCCEE
DVSFGDTLPIFRWCDIWKFRGDLQLELEGGVWAIFDPLHKSAPLIDADYYVGIPITYAFG
EECCCCCCCHHHHHHHEEECCCEEEEECCCEEEEECCCCCCCCEEECCEEECCEEEEEEC
NWALRLRGYHISTHIGDEFLINHPHFDRRNPSIEAIDLSVSWQKEQIRLYGVLGWVCCQD
CEEEEEEEEEEEEECCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEECC
DSFRVGPFYLETGLELRLSQLGYRDHCNRLYSEPFFGMHFRYQSHFKKHINQTYVLGWEW
CCEEECCEEEECCCHHHHHHCCCHHHHHHHHCCCCCEEEEHHHHHHHHHCCCEEEEEECC
GKVSGIRRKFRLFLEYHDGYSLDGQFCKRATHYLSFRGSYGF
CCHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA