Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is nuoN
Identifier: 46446206
GI number: 46446206
Start: 706056
End: 707498
Strand: Direct
Name: nuoN
Synonym: pc0572
Alternate gene names: 46446206
Gene position: 706056-707498 (Clockwise)
Preceding gene: 46446205
Following gene: 46446208
Centisome position: 29.24
GC content: 35.14
Gene sequence:
>1443_bases ATGAATCCTACTTTGACATTAACCGATTTTATTTCTATCGGGCCATTATTAATTGTTTTAATGACCGCTTTAATCATTAT CCTTATAGAAAGTTTCAGTGAGAACTGTTCCAAAAAATGGTCTTCTCTTATTTCTATTGGTGGACTCACACTATCCATTT TCGCCGTATGGGGGGGAATTTCTTCTAATCATAGCTCATTGTTAAATCCTTGGATTCATTTTGATACTTTAGCACGATTT TTTACTGTTTTTTTCTTAGTAATCGGAATCGGAGCCTCTCTTTTAGCAACTGCATTTTTTCAAAGATTCAAAGCATCGCA TGGGGAATATTTTTTTCTTCTTCAATCGGCCGTTTTTGGATTGATTTTGATTGGAGCCGCTGCGGATCTTCTAACATTAT TTTTAGGAATTGAAACACTTTCTATCTCATTATACGTTTTATGCGGGTATATGAAAAAATGGGAAATTTCTCATGAATCA TCTTTTAAATATTTTTTGATGGGCTCGATTGTCGCTGGATTTCTCTTATATGGAATTGCTTTAGTTTATGGTGCAATTGG GACGACACGATTAGATGTTTTACTTTCTTCTTATCAAACGATTTCTTTAACTACGGAAAAAGTTTTGTTTTTCAGTGGAA TTGCCATGATAACTTTAGGACTGGCTTTTAAAGCGGCTCTTGTTCCTTTTCATACTTGGTCACCAGATGTTTATGCTGGG GCTTCAAACCCGGTTACGGCATTTATGGCTGTAGGGACTAAGGTAGGGGTTTTTGCTGCTTTTGTGCGCTTATTTTTTGA AGCCTTGCCACAATTTGATGCAGCTTGGAATCAGGTGATTGATACATTAGTTTACGCAACTCTTATTTATGCTAATTTTG TCGCATTAAAACAAATACAATTACGTCGCTTTTTTGCCTATTCAAGCATTTCGCACGCAGGATTTTTAATGATTCCTGTT GTTATAGGAAATCAAGAAGCCTTATCCGCTTTGACTTTTTATCTTGTGATTTATGCTATTGCAACGTTTGGATGTTTTGC CGTTTTAGCTTATCTTGATCAAAATCAAGAAGGTGTTCATTTTTCAGATTTACATGGATTATTTAGTCGATCTCCTTGGC TGGCAAGTCTTCTTTCTATTTGTTTATTAACCCTAGCAGGTATTCCTCCTACAGCGGGATTTTTGGCTAAATTTTATGTT TTTAAAGTGGCCTTTCAAGCAGGTTATTATGGACTCGTTATTGTTGGGTTACTCACAACAATTCTTTCTTCGTATTATTA CTTACGAATTATTGGAATATTGTTTTCAGAATCCAAAAATGATGAAAAACTCCCTTACTCTATGCCAGCGGCAATTGTGG GAACCACCTCATTTATAGCTATTATTATTCTCTCTTTTTATCCAGCTCCCTTTTTAAAGGTTCTAAGTCATTTATCAAAC TAA
Upstream 100 bases:
>100_bases TCTTTTTAAACTTATGGATTGGCTTATATCCCATGGGAATTCTCAAATATTTAGACGCTGATCATTCCAAATCGCAAGTA TTGACTCAGGAGATGATAAA
Downstream 100 bases:
>100_bases CTTAACGTAACCATTTGCTTAAATTTATCAAAAAATACGGGATTATTAAAAAATATCTTTAAGTTTTCTTCCTTCTGTTA GATGAGGAGAGGGTGGATGC
Product: putative NADH-ubiquinone oxidoreductase chain N
Products: NA
Alternate protein names: NADH dehydrogenase I subunit N; NDH-1 subunit N
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MNPTLTLTDFISIGPLLIVLMTALIIILIESFSENCSKKWSSLISIGGLTLSIFAVWGGISSNHSSLLNPWIHFDTLARF FTVFFLVIGIGASLLATAFFQRFKASHGEYFFLLQSAVFGLILIGAAADLLTLFLGIETLSISLYVLCGYMKKWEISHES SFKYFLMGSIVAGFLLYGIALVYGAIGTTRLDVLLSSYQTISLTTEKVLFFSGIAMITLGLAFKAALVPFHTWSPDVYAG ASNPVTAFMAVGTKVGVFAAFVRLFFEALPQFDAAWNQVIDTLVYATLIYANFVALKQIQLRRFFAYSSISHAGFLMIPV VIGNQEALSALTFYLVIYAIATFGCFAVLAYLDQNQEGVHFSDLHGLFSRSPWLASLLSICLLTLAGIPPTAGFLAKFYV FKVAFQAGYYGLVIVGLLTTILSSYYYLRIIGILFSESKNDEKLPYSMPAAIVGTTSFIAIIILSFYPAPFLKVLSHLSN
Sequences:
>Translated_480_residues MNPTLTLTDFISIGPLLIVLMTALIIILIESFSENCSKKWSSLISIGGLTLSIFAVWGGISSNHSSLLNPWIHFDTLARF FTVFFLVIGIGASLLATAFFQRFKASHGEYFFLLQSAVFGLILIGAAADLLTLFLGIETLSISLYVLCGYMKKWEISHES SFKYFLMGSIVAGFLLYGIALVYGAIGTTRLDVLLSSYQTISLTTEKVLFFSGIAMITLGLAFKAALVPFHTWSPDVYAG ASNPVTAFMAVGTKVGVFAAFVRLFFEALPQFDAAWNQVIDTLVYATLIYANFVALKQIQLRRFFAYSSISHAGFLMIPV VIGNQEALSALTFYLVIYAIATFGCFAVLAYLDQNQEGVHFSDLHGLFSRSPWLASLLSICLLTLAGIPPTAGFLAKFYV FKVAFQAGYYGLVIVGLLTTILSSYYYLRIIGILFSESKNDEKLPYSMPAAIVGTTSFIAIIILSFYPAPFLKVLSHLSN >Mature_480_residues MNPTLTLTDFISIGPLLIVLMTALIIILIESFSENCSKKWSSLISIGGLTLSIFAVWGGISSNHSSLLNPWIHFDTLARF FTVFFLVIGIGASLLATAFFQRFKASHGEYFFLLQSAVFGLILIGAAADLLTLFLGIETLSISLYVLCGYMKKWEISHES SFKYFLMGSIVAGFLLYGIALVYGAIGTTRLDVLLSSYQTISLTTEKVLFFSGIAMITLGLAFKAALVPFHTWSPDVYAG ASNPVTAFMAVGTKVGVFAAFVRLFFEALPQFDAAWNQVIDTLVYATLIYANFVALKQIQLRRFFAYSSISHAGFLMIPV VIGNQEALSALTFYLVIYAIATFGCFAVLAYLDQNQEGVHFSDLHGLFSRSPWLASLLSICLLTLAGIPPTAGFLAKFYV FKVAFQAGYYGLVIVGLLTTILSSYYYLRIIGILFSESKNDEKLPYSMPAAIVGTTSFIAIIILSFYPAPFLKVLSHLSN
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1007
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 2 (chain N)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 2 family
Homologues:
Organism=Escherichia coli, GI145693160, Length=482, Percent_Identity=30.9128630705394, Blast_Score=222, Evalue=3e-59, Organism=Escherichia coli, GI1788831, Length=341, Percent_Identity=22.2873900293255, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1788614, Length=399, Percent_Identity=23.3082706766917, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1788613, Length=189, Percent_Identity=25.9259259259259, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1788827, Length=451, Percent_Identity=21.7294900221729, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NUON_PARUW (Q6MDQ3)
Other databases:
- EMBL: BX908798 - RefSeq: YP_007571.1 - STRING: Q6MDQ3 - GeneID: 2781353 - GenomeReviews: BX908798_GR - KEGG: pcu:pc0572 - NMPDR: fig|264201.1.peg.572 - HOGENOM: HBG747830 - OMA: FESVSIM - PhylomeDB: Q6MDQ3 - BioCyc: CPRO264201:PC0572-MONOMER - GO: GO:0006810 - HAMAP: MF_00445 - InterPro: IPR010096 - InterPro: IPR001750 - TIGRFAMs: TIGR01770
Pfam domain/function: PF00361 Oxidored_q1
EC number: =1.6.99.5
Molecular weight: Translated: 52627; Mature: 52627
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x403a0d10)-; HASH(0xc3c4078)-; HASH(0xcb88d34)-; HASH(0xcefb3a0)-; HASH(0xc353bd8)-; HASH(0xca6247c)-; HASH(0xbf8bb08)-; HASH(0x9519274)-; HASH(0xcef89dc)-; HASH(0xc78c930)-; HASH(0xce9c59c)-; HASH(0xbe61c90)-; HASH(0x94beb20)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPTLTLTDFISIGPLLIVLMTALIIILIESFSENCSKKWSSLISIGGLTLSIFAVWGGI CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC SSNHSSLLNPWIHFDTLARFFTVFFLVIGIGASLLATAFFQRFKASHGEYFFLLQSAVFG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LILIGAAADLLTLFLGIETLSISLYVLCGYMKKWEISHESSFKYFLMGSIVAGFLLYGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LVYGAIGTTRLDVLLSSYQTISLTTEKVLFFSGIAMITLGLAFKAALVPFHTWSPDVYAG HHHHCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC ASNPVTAFMAVGTKVGVFAAFVRLFFEALPQFDAAWNQVIDTLVYATLIYANFVALKQIQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRFFAYSSISHAGFLMIPVVIGNQEALSALTFYLVIYAIATFGCFAVLAYLDQNQEGVH HHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC FSDLHGLFSRSPWLASLLSICLLTLAGIPPTAGFLAKFYVFKVAFQAGYYGLVIVGLLTT HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ILSSYYYLRIIGILFSESKNDEKLPYSMPAAIVGTTSFIAIIILSFYPAPFLKVLSHLSN HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCH >Mature Secondary Structure MNPTLTLTDFISIGPLLIVLMTALIIILIESFSENCSKKWSSLISIGGLTLSIFAVWGGI CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC SSNHSSLLNPWIHFDTLARFFTVFFLVIGIGASLLATAFFQRFKASHGEYFFLLQSAVFG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LILIGAAADLLTLFLGIETLSISLYVLCGYMKKWEISHESSFKYFLMGSIVAGFLLYGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LVYGAIGTTRLDVLLSSYQTISLTTEKVLFFSGIAMITLGLAFKAALVPFHTWSPDVYAG HHHHCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC ASNPVTAFMAVGTKVGVFAAFVRLFFEALPQFDAAWNQVIDTLVYATLIYANFVALKQIQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRFFAYSSISHAGFLMIPVVIGNQEALSALTFYLVIYAIATFGCFAVLAYLDQNQEGVH HHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC FSDLHGLFSRSPWLASLLSICLLTLAGIPPTAGFLAKFYVFKVAFQAGYYGLVIVGLLTT HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ILSSYYYLRIIGILFSESKNDEKLPYSMPAAIVGTTSFIAIIILSFYPAPFLKVLSHLSN HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA