Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is nasA
Identifier: 46446178
GI number: 46446178
Start: 676516
End: 677739
Strand: Reverse
Name: nasA
Synonym: pc0544
Alternate gene names: NA
Gene position: 677739-676516 (Counterclockwise)
Preceding gene: 46446181
Following gene: 46446175
Centisome position: 28.07
GC content: 36.85
Gene sequence:
>1224_bases ATGCCTACCTCTCGATTGGCTGCCTGGGTCATGTGGATAGTCGCTTCGATCTTTTATGCCTATCAATATCTATTAAGAGT GATGCCTAACATTGTAATCGATGACATCATGCAACAATTTCAAATTGGAGCAGCCACAATCGGTCAATTTTCAGGTATCT ATTACATCGGTTACTCTCTGATGCATCTACCTCTTGGAATATTATTAGATCGCTATGGACCTAGAATGATCATGAGCATT TGTATCTTATTGACAGTTATTGGGTTACTTCCACTTATTTTCGCGACACATTGGATTTATCCAATTGCTGGGCGTGCTTT GATTGGAATGGGGTCTTCTGCAGCCATTCTTGGATTGTTCAAAATTATTCGTTTAAGCTTTAGCGAAGAAAAATTTCCTC GTATGCTTAGTATTTCTGTGATGATAGGATTATTAGGAGCAATTTATGGAGGAGGACCTGTCGGTTACTTGCGCGAAATA TATGGATATCACGCAGTCGTTCAATTATTTGCTTTAATCGGTATTGTTTTAATGGGAATTACTTACTGGATGATTCCTAA TGTGAGAAGTTCTCAACCAACCTCTATGATGAGCGAGATCAAAAATGTTATTTTTAATAAACGCGTCATTTGGTGTTGTC TATTTGCAGGTCTAATGGTTGGACCTCTTGAGGGTTTTGCCGATGTCTGGGGACGCTCATTTTTAAAAGAAGTTTATCAA TTTGACGGAACTTTAGCTGCCAGTTTACCTTCCATGATTTTTATAGGCATGTGTTTTGGAGCTCCAATTTTAAGTTTAAT TGCCGAGAAAACAGGCAATTACTTAACAACTATTATTGGGGCTGGAATCATTATGACAATCAGCTTTTCTAGCTTGCTTA TTTGGCATTTAAATACAAATTGGATGGGATTTAATTTTATTATTGTAGGCATTTGCTGCGCTTATCAAATTTTGGCTATT TATAAAGCCTCAACATATGTTTCTGAACAAGCCGCAGGTTTAACAACGGCAGTGGCCAATATGATCATTATGATCTTCGG ATATACTTTTCATGCAATCATAGGTAGTATAATTAATGTATTTGGTGGCTCAAATAACGAACAAGCATTAATCTACGGAA TTGCCGTTATTCCGATTGGATTAACTATAGGTATCCTGGGCTTTGTCATTTTATTCATGTCTGAGCAAGTTAAAACAGAG AAAGAACTTTTACCAAGTTCTTAA
Upstream 100 bases:
>100_bases TTTTACCTTTTTCTTCTAAGCTTTTAGGAAGCAGTTTTCACTTGTAATGTTTCGTTATTTTACCTCAAATTTAGTATTTT TATCTTAAAAAGGAATATGT
Downstream 100 bases:
>100_bases ATGACTCTTGTAAATTACTAATCATCCCTCGAAATTTTTTCTCGAGGGGTGGGTAGGCATAAAAAGTTAAGTTCACTATT AACTCTAAAAATTAAAAATT
Product: putative to nasA protein
Products: NA
Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Permease; Sugar Phosphate Permease; Transporter MFS Superfamily; Facilitator Superfamily Permease; Sugar Transporter; Facilitator Family Transporter Transporter; Facilitator Superfamily Sugar Transporter; Bicyclomycin Resistance Protein; Facilitator Protein; Facilitator Membrane Proteins; Transporter Facilitator Family; Facilitator Family Oxalate/Formate Antiporter; Facilitator Family Hexuronate Transporter; Intraphagosomal Amino Acid Transporter Family Protein; Sugar Transport Family Protein; Transport Proteins; MFS Family Transporter; Multidrug ABC Transporter; Facilitator Family Protein; NasA Protein
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MPTSRLAAWVMWIVASIFYAYQYLLRVMPNIVIDDIMQQFQIGAATIGQFSGIYYIGYSLMHLPLGILLDRYGPRMIMSI CILLTVIGLLPLIFATHWIYPIAGRALIGMGSSAAILGLFKIIRLSFSEEKFPRMLSISVMIGLLGAIYGGGPVGYLREI YGYHAVVQLFALIGIVLMGITYWMIPNVRSSQPTSMMSEIKNVIFNKRVIWCCLFAGLMVGPLEGFADVWGRSFLKEVYQ FDGTLAASLPSMIFIGMCFGAPILSLIAEKTGNYLTTIIGAGIIMTISFSSLLIWHLNTNWMGFNFIIVGICCAYQILAI YKASTYVSEQAAGLTTAVANMIIMIFGYTFHAIIGSIINVFGGSNNEQALIYGIAVIPIGLTIGILGFVILFMSEQVKTE KELLPSS
Sequences:
>Translated_407_residues MPTSRLAAWVMWIVASIFYAYQYLLRVMPNIVIDDIMQQFQIGAATIGQFSGIYYIGYSLMHLPLGILLDRYGPRMIMSI CILLTVIGLLPLIFATHWIYPIAGRALIGMGSSAAILGLFKIIRLSFSEEKFPRMLSISVMIGLLGAIYGGGPVGYLREI YGYHAVVQLFALIGIVLMGITYWMIPNVRSSQPTSMMSEIKNVIFNKRVIWCCLFAGLMVGPLEGFADVWGRSFLKEVYQ FDGTLAASLPSMIFIGMCFGAPILSLIAEKTGNYLTTIIGAGIIMTISFSSLLIWHLNTNWMGFNFIIVGICCAYQILAI YKASTYVSEQAAGLTTAVANMIIMIFGYTFHAIIGSIINVFGGSNNEQALIYGIAVIPIGLTIGILGFVILFMSEQVKTE KELLPSS >Mature_406_residues PTSRLAAWVMWIVASIFYAYQYLLRVMPNIVIDDIMQQFQIGAATIGQFSGIYYIGYSLMHLPLGILLDRYGPRMIMSIC ILLTVIGLLPLIFATHWIYPIAGRALIGMGSSAAILGLFKIIRLSFSEEKFPRMLSISVMIGLLGAIYGGGPVGYLREIY GYHAVVQLFALIGIVLMGITYWMIPNVRSSQPTSMMSEIKNVIFNKRVIWCCLFAGLMVGPLEGFADVWGRSFLKEVYQF DGTLAASLPSMIFIGMCFGAPILSLIAEKTGNYLTTIIGAGIIMTISFSSLLIWHLNTNWMGFNFIIVGICCAYQILAIY KASTYVSEQAAGLTTAVANMIIMIFGYTFHAIIGSIINVFGGSNNEQALIYGIAVIPIGLTIGILGFVILFMSEQVKTEK ELLPSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44757; Mature: 44626
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSRLAAWVMWIVASIFYAYQYLLRVMPNIVIDDIMQQFQIGAATIGQFSGIYYIGYSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHH MHLPLGILLDRYGPRMIMSICILLTVIGLLPLIFATHWIYPIAGRALIGMGSSAAILGLF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHH KIIRLSFSEEKFPRMLSISVMIGLLGAIYGGGPVGYLREIYGYHAVVQLFALIGIVLMGI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYWMIPNVRSSQPTSMMSEIKNVIFNKRVIWCCLFAGLMVGPLEGFADVWGRSFLKEVYQ HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDGTLAASLPSMIFIGMCFGAPILSLIAEKTGNYLTTIIGAGIIMTISFSSLLIWHLNTN HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEECCC WMGFNFIIVGICCAYQILAIYKASTYVSEQAAGLTTAVANMIIMIFGYTFHAIIGSIINV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGGSNNEQALIYGIAVIPIGLTIGILGFVILFMSEQVKTEKELLPSS HCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PTSRLAAWVMWIVASIFYAYQYLLRVMPNIVIDDIMQQFQIGAATIGQFSGIYYIGYSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHH MHLPLGILLDRYGPRMIMSICILLTVIGLLPLIFATHWIYPIAGRALIGMGSSAAILGLF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHH KIIRLSFSEEKFPRMLSISVMIGLLGAIYGGGPVGYLREIYGYHAVVQLFALIGIVLMGI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYWMIPNVRSSQPTSMMSEIKNVIFNKRVIWCCLFAGLMVGPLEGFADVWGRSFLKEVYQ HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDGTLAASLPSMIFIGMCFGAPILSLIAEKTGNYLTTIIGAGIIMTISFSSLLIWHLNTN HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEECCC WMGFNFIIVGICCAYQILAIYKASTYVSEQAAGLTTAVANMIIMIFGYTFHAIIGSIINV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGGSNNEQALIYGIAVIPIGLTIGILGFVILFMSEQVKTEKELLPSS HCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA