Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is yiiD [C]

Identifier: 46446176

GI number: 46446176

Start: 674366

End: 674797

Strand: Direct

Name: yiiD [C]

Synonym: pc0542

Alternate gene names: 46446176

Gene position: 674366-674797 (Clockwise)

Preceding gene: 46446172

Following gene: 46446177

Centisome position: 27.93

GC content: 34.72

Gene sequence:

>432_bases
ATGTATCTTTGGAAACACATTCCTATTTCTAAAGCAATGGGGGTTACTGTGAAGGAAGCTTCCAAATTAAAAATTACATT
AGAAGCTCCTTTATTAAATAACCTAAATCACAAGAAAACGGTTTTCGGGGGAAGTTTGCACGCCGTGGCTACTTTGTCAT
GTTGGAGTTTATTACACCTAAATATAGCTGATATTTATGTACAACCAGTCCAAATCGTGATTGCAAAAAGTGAAGTAAAT
TATCTGTTACCTGTTTCAACTAAGTTTGAGGCGGAATGTGAAATGCCAGATTTAACAAAATGGGAAAGATTTTTAAAAAC
ATTTCAAAGAATGGGAAAAGCTCGCCTAAGCTTATCAGCGAAAATTATGAAAGGAGAGAAGACTTATGTCGATTATTTAG
GAGTTTTTGTAGCCTTAATGGACAAGCAGTAA

Upstream 100 bases:

>100_bases
AATACAAATTCAATTTTAACAAAAGTGGGTTAAAATTACTAAATTTTATTTACTTTGAACAAAAGAGTTTTTCATGATTT
TACCTAAAGATGAATTAGAA

Downstream 100 bases:

>100_bases
ATAGGACAAAAATTTTACCTATTTAAATAACTTTTATTCCTGAAGATGATAAACAAATTATTTTGTTTGTAAATTCGGCA
CAAATGAGGATTAGAAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase Domain-Containing Protein; Thioesterase; WecD Protein; Acetyltransferase Domain-Containing Protein; Histone Acetyltransferase HPA2-Like Acetyltransferase

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MYLWKHIPISKAMGVTVKEASKLKITLEAPLLNNLNHKKTVFGGSLHAVATLSCWSLLHLNIADIYVQPVQIVIAKSEVN
YLLPVSTKFEAECEMPDLTKWERFLKTFQRMGKARLSLSAKIMKGEKTYVDYLGVFVALMDKQ

Sequences:

>Translated_143_residues
MYLWKHIPISKAMGVTVKEASKLKITLEAPLLNNLNHKKTVFGGSLHAVATLSCWSLLHLNIADIYVQPVQIVIAKSEVN
YLLPVSTKFEAECEMPDLTKWERFLKTFQRMGKARLSLSAKIMKGEKTYVDYLGVFVALMDKQ
>Mature_143_residues
MYLWKHIPISKAMGVTVKEASKLKITLEAPLLNNLNHKKTVFGGSLHAVATLSCWSLLHLNIADIYVQPVQIVIAKSEVN
YLLPVSTKFEAECEMPDLTKWERFLKTFQRMGKARLSLSAKIMKGEKTYVDYLGVFVALMDKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790321, Length=136, Percent_Identity=29.4117647058824, Blast_Score=66, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16213; Mature: 16213

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLWKHIPISKAMGVTVKEASKLKITLEAPLLNNLNHKKTVFGGSLHAVATLSCWSLLHL
CCEECCCCCCHHCCCEEECCCEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHC
NIADIYVQPVQIVIAKSEVNYLLPVSTKFEAECEMPDLTKWERFLKTFQRMGKARLSLSA
CHHHEEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEE
KIMKGEKTYVDYLGVFVALMDKQ
EEECCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYLWKHIPISKAMGVTVKEASKLKITLEAPLLNNLNHKKTVFGGSLHAVATLSCWSLLHL
CCEECCCCCCHHCCCEEECCCEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHC
NIADIYVQPVQIVIAKSEVNYLLPVSTKFEAECEMPDLTKWERFLKTFQRMGKARLSLSA
CHHHEEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEE
KIMKGEKTYVDYLGVFVALMDKQ
EEECCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA