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The map label for this gene is insC1 [C]

Identifier: 46446161

GI number: 46446161

Start: 660518

End: 660730

Strand: Direct

Name: insC1 [C]

Synonym: pc0527

Alternate gene names: 46446161

Gene position: 660518-660730 (Clockwise)

Preceding gene: 46446158

Following gene: 46446162

Centisome position: 27.36

GC content: 42.25

Gene sequence:

>213_bases
ATGGAACAAGGAGCACGACAAGGAATTAGCAGCCGAGAAGAACTAGTTCCCAAAAGCCAAGTGAAAGAAATGGAAAAGCG
AATAAGAGAACTAGAGCGGATGCTTGGGAAAAAGACACTTGAAAATGAAATTTTAAAAGAGGCTGTAAGGCTTGGGCAGG
AAAAAAAACTCATCTCGCGGCAGCCATTGCCAAGCTTAAACGATTTAGCCTAA

Upstream 100 bases:

>100_bases
AACAGATTATTGAAAAACATATCAAGAAGGTCAATCTGTTTTCCAAATAGCAAGGAGATATGATATCACACCAAGTCAAC
TTTTTGCATGGAGAAGGCAG

Downstream 100 bases:

>100_bases
GGAAAATAGCAAAGGTGATGGAAGTATCAAGATCCAATCTTATAGAGCAGCTTAAAGAGCATTTACCTCATCAGCCAGTC
TTTTATTCTAAAGCGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MEQGARQGISSREELVPKSQVKEMEKRIRELERMLGKKTLENEILKEAVRLGQEKKLISRQPLPSLNDLA

Sequences:

>Translated_70_residues
MEQGARQGISSREELVPKSQVKEMEKRIRELERMLGKKTLENEILKEAVRLGQEKKLISRQPLPSLNDLA
>Mature_70_residues
MEQGARQGISSREELVPKSQVKEMEKRIRELERMLGKKTLENEILKEAVRLGQEKKLISRQPLPSLNDLA

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI145693215, Length=63, Percent_Identity=46.031746031746, Blast_Score=64, Evalue=3e-12,
Organism=Escherichia coli, GI145693180, Length=63, Percent_Identity=46.031746031746, Blast_Score=64, Evalue=3e-12,
Organism=Escherichia coli, GI145693177, Length=63, Percent_Identity=46.031746031746, Blast_Score=64, Evalue=3e-12,
Organism=Escherichia coli, GI145693154, Length=63, Percent_Identity=46.031746031746, Blast_Score=64, Evalue=3e-12,
Organism=Escherichia coli, GI145693126, Length=63, Percent_Identity=46.031746031746, Blast_Score=64, Evalue=3e-12,
Organism=Escherichia coli, GI145693097, Length=63, Percent_Identity=46.031746031746, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 8086; Mature: 8086

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQGARQGISSREELVPKSQVKEMEKRIRELERMLGKKTLENEILKEAVRLGQEKKLISR
CCCCHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC
QPLPSLNDLA
CCCCCCCCCC
>Mature Secondary Structure
MEQGARQGISSREELVPKSQVKEMEKRIRELERMLGKKTLENEILKEAVRLGQEKKLISR
CCCCHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC
QPLPSLNDLA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA