Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446158
Identifier: 46446158
GI number: 46446158
Start: 659467
End: 659661
Strand: Direct
Name: 46446158
Synonym: pc0524
Alternate gene names: NA
Gene position: 659467-659661 (Clockwise)
Preceding gene: 46446157
Following gene: 46446161
Centisome position: 27.31
GC content: 38.46
Gene sequence:
>195_bases TTGGCAGATCATCGCTCTTATAAATCGTTGGTCGTAGGTTCTAATCTCATTCGCCTCCTTCTCTTTAACTTACAACTGAT CAAGAGCAAGCCTTGTTTCTATGGAAAGTTCTTAGTACTTCATAATGTTTCTGAGCATAACTTAACACATAACTTCTTCG CGCTGACATGGCTATTAACCATAGGAACGCATTAA
Upstream 100 bases:
>100_bases CCGGTCTATTACACCCATCTTAATCCGATAAAATTCAGTAGTCTTTTGTTCAAAAACCATTTAGTACCTTAATTATAGCG ATTGGATGAAATCGATTTGA
Downstream 100 bases:
>100_bases GATTTTAAACTTTATTAGTTCGATGAGATTTAATATATGAGTAAGATTAAATCATTAAAAAATTATAACGGGGCATGACA GGAATGTTGGCCAACCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MADHRSYKSLVVGSNLIRLLLFNLQLIKSKPCFYGKFLVLHNVSEHNLTHNFFALTWLLTIGTH
Sequences:
>Translated_64_residues MADHRSYKSLVVGSNLIRLLLFNLQLIKSKPCFYGKFLVLHNVSEHNLTHNFFALTWLLTIGTH >Mature_63_residues ADHRSYKSLVVGSNLIRLLLFNLQLIKSKPCFYGKFLVLHNVSEHNLTHNFFALTWLLTIGTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7412; Mature: 7281
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHRSYKSLVVGSNLIRLLLFNLQLIKSKPCFYGKFLVLHNVSEHNLTHNFFALTWLLT CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH IGTH HCCC >Mature Secondary Structure ADHRSYKSLVVGSNLIRLLLFNLQLIKSKPCFYGKFLVLHNVSEHNLTHNFFALTWLLT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH IGTH HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA