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The map label for this gene is yggU [C]

Identifier: 46446134

GI number: 46446134

Start: 639171

End: 639449

Strand: Direct

Name: yggU [C]

Synonym: pc0500

Alternate gene names: 46446134

Gene position: 639171-639449 (Clockwise)

Preceding gene: 46446132

Following gene: 46446135

Centisome position: 26.47

GC content: 35.48

Gene sequence:

>279_bases
ATGTTTCAACAAACAAATCGAGGAATCATTATTAAAATCAAAGTCATTCCTCTTGCTTCTTTTTCAGAAAAAGTCGGATG
GGAAGGGGATGAATTAAAAATACGACTGGCAGCCATTCCCGATAAAGGCCAAGCAAATACAGAACTCATTCGTTTTCTCT
CTTCCTTATTTAAGATTCGAAAAAGTTCTATTCAGCTTATTCAAGGACAAACGAGTCGACACAAAAAAATTTGCATTCAA
GATATTTCATTGGAAAGGCTTCAAGTGTTGCTAGCTTGA

Upstream 100 bases:

>100_bases
GTAATAAATGTACAGCTTACTAAGAGAGCATTTTTATTTTTCATGTTTCATTCCTTAAATAAAGCATCGGAAACTTAACT
TATTATAATAATGGTTATAA

Downstream 100 bases:

>100_bases
AAGGAAATGAAGGACAACTTTTTCTTATCTAAAACTCCCATTTTTAATAGACTGATTGCTACCAATTTCTAACTAGGAGC
CCATAGTGAGAAAAGCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MFQQTNRGIIIKIKVIPLASFSEKVGWEGDELKIRLAAIPDKGQANTELIRFLSSLFKIRKSSIQLIQGQTSRHKKICIQ
DISLERLQVLLA

Sequences:

>Translated_92_residues
MFQQTNRGIIIKIKVIPLASFSEKVGWEGDELKIRLAAIPDKGQANTELIRFLSSLFKIRKSSIQLIQGQTSRHKKICIQ
DISLERLQVLLA
>Mature_92_residues
MFQQTNRGIIIKIKVIPLASFSEKVGWEGDELKIRLAAIPDKGQANTELIRFLSSLFKIRKSSIQLIQGQTSRHKKICIQ
DISLERLQVLLA

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

Organism=Escherichia coli, GI87082189, Length=75, Percent_Identity=37.3333333333333, Blast_Score=63, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005228
- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 10461; Mature: 10461

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQQTNRGIIIKIKVIPLASFSEKVGWEGDELKIRLAAIPDKGQANTELIRFLSSLFKIR
CCCCCCCCEEEEEEEEECCCCCHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH
KSSIQLIQGQTSRHKKICIQDISLERLQVLLA
HHHHHEECCCCCCCCEEEEECCCHHHHHHHCC
>Mature Secondary Structure
MFQQTNRGIIIKIKVIPLASFSEKVGWEGDELKIRLAAIPDKGQANTELIRFLSSLFKIR
CCCCCCCCEEEEEEEEECCCCCHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH
KSSIQLIQGQTSRHKKICIQDISLERLQVLLA
HHHHHEECCCCCCCCEEEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA