Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446132
Identifier: 46446132
GI number: 46446132
Start: 638378
End: 638704
Strand: Direct
Name: 46446132
Synonym: pc0498
Alternate gene names: NA
Gene position: 638378-638704 (Clockwise)
Preceding gene: 46446129
Following gene: 46446134
Centisome position: 26.44
GC content: 31.5
Gene sequence:
>327_bases ATGTTCAAACAATCAACAAAATTTTTACTCTTTTTTTTAATAGTTTTTGGCTGTACACATGCAATCAATCCTGAAAATTC TTCAGAAATTCCTTATATTGATAAGCGACTTATTGAACTCAAACAGCACTTAAAAGAGTTACAATCGTCTGAATTTAATG AAGTAGTGACAGGGCAAGAATATATGATTGCAGATTGGTCAGCTTACGAAAGAGAAATTCAAAAATTTAAACAAATAAAA GAGCTCGAGCGTGACCTTCAAGATAAAATTGAACAGCTGGAAAAAAGAAAGCGAGAATTGCTAAAGCAGCCTAAAAGCAA TCAATAA
Upstream 100 bases:
>100_bases TGAGACATAAAATAATTTTAAGGCTTAGTTTTTATGAATCAATATTTTCTAGAAATGGTATAAGTAAGATGGCTTCCAAT ATTTCTCAAGGAGAATTTTT
Downstream 100 bases:
>100_bases AAGATAATAAACTCTTTTAGGGAACTTTATCTGATGTTTTAAAGCAAAAGGAAGTTTGTGCCAACATAGTAAAAGTAAAT TTAAATTTTGTTTGTTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MFKQSTKFLLFFLIVFGCTHAINPENSSEIPYIDKRLIELKQHLKELQSSEFNEVVTGQEYMIADWSAYEREIQKFKQIK ELERDLQDKIEQLEKRKRELLKQPKSNQ
Sequences:
>Translated_108_residues MFKQSTKFLLFFLIVFGCTHAINPENSSEIPYIDKRLIELKQHLKELQSSEFNEVVTGQEYMIADWSAYEREIQKFKQIK ELERDLQDKIEQLEKRKRELLKQPKSNQ >Mature_108_residues MFKQSTKFLLFFLIVFGCTHAINPENSSEIPYIDKRLIELKQHLKELQSSEFNEVVTGQEYMIADWSAYEREIQKFKQIK ELERDLQDKIEQLEKRKRELLKQPKSNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13022; Mature: 13022
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKQSTKFLLFFLIVFGCTHAINPENSSEIPYIDKRLIELKQHLKELQSSEFNEVVTGQE CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YMIADWSAYEREIQKFKQIKELERDLQDKIEQLEKRKRELLKQPKSNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MFKQSTKFLLFFLIVFGCTHAINPENSSEIPYIDKRLIELKQHLKELQSSEFNEVVTGQE CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YMIADWSAYEREIQKFKQIKELERDLQDKIEQLEKRKRELLKQPKSNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA