Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446132

Identifier: 46446132

GI number: 46446132

Start: 638378

End: 638704

Strand: Direct

Name: 46446132

Synonym: pc0498

Alternate gene names: NA

Gene position: 638378-638704 (Clockwise)

Preceding gene: 46446129

Following gene: 46446134

Centisome position: 26.44

GC content: 31.5

Gene sequence:

>327_bases
ATGTTCAAACAATCAACAAAATTTTTACTCTTTTTTTTAATAGTTTTTGGCTGTACACATGCAATCAATCCTGAAAATTC
TTCAGAAATTCCTTATATTGATAAGCGACTTATTGAACTCAAACAGCACTTAAAAGAGTTACAATCGTCTGAATTTAATG
AAGTAGTGACAGGGCAAGAATATATGATTGCAGATTGGTCAGCTTACGAAAGAGAAATTCAAAAATTTAAACAAATAAAA
GAGCTCGAGCGTGACCTTCAAGATAAAATTGAACAGCTGGAAAAAAGAAAGCGAGAATTGCTAAAGCAGCCTAAAAGCAA
TCAATAA

Upstream 100 bases:

>100_bases
TGAGACATAAAATAATTTTAAGGCTTAGTTTTTATGAATCAATATTTTCTAGAAATGGTATAAGTAAGATGGCTTCCAAT
ATTTCTCAAGGAGAATTTTT

Downstream 100 bases:

>100_bases
AAGATAATAAACTCTTTTAGGGAACTTTATCTGATGTTTTAAAGCAAAAGGAAGTTTGTGCCAACATAGTAAAAGTAAAT
TTAAATTTTGTTTGTTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MFKQSTKFLLFFLIVFGCTHAINPENSSEIPYIDKRLIELKQHLKELQSSEFNEVVTGQEYMIADWSAYEREIQKFKQIK
ELERDLQDKIEQLEKRKRELLKQPKSNQ

Sequences:

>Translated_108_residues
MFKQSTKFLLFFLIVFGCTHAINPENSSEIPYIDKRLIELKQHLKELQSSEFNEVVTGQEYMIADWSAYEREIQKFKQIK
ELERDLQDKIEQLEKRKRELLKQPKSNQ
>Mature_108_residues
MFKQSTKFLLFFLIVFGCTHAINPENSSEIPYIDKRLIELKQHLKELQSSEFNEVVTGQEYMIADWSAYEREIQKFKQIK
ELERDLQDKIEQLEKRKRELLKQPKSNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13022; Mature: 13022

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKQSTKFLLFFLIVFGCTHAINPENSSEIPYIDKRLIELKQHLKELQSSEFNEVVTGQE
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YMIADWSAYEREIQKFKQIKELERDLQDKIEQLEKRKRELLKQPKSNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFKQSTKFLLFFLIVFGCTHAINPENSSEIPYIDKRLIELKQHLKELQSSEFNEVVTGQE
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YMIADWSAYEREIQKFKQIKELERDLQDKIEQLEKRKRELLKQPKSNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA