Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446107
Identifier: 46446107
GI number: 46446107
Start: 608972
End: 609778
Strand: Direct
Name: 46446107
Synonym: pc0473
Alternate gene names: NA
Gene position: 608972-609778 (Clockwise)
Preceding gene: 46446102
Following gene: 46446108
Centisome position: 25.22
GC content: 34.08
Gene sequence:
>807_bases ATGGATCGACACGTTAAAGAGCATTATAGTTGTTACTCAGAAGAATCACCTCAAGGACATTTTCATTGTGTCATTGAGTT AAATGAAAATCCTATGATTGATTGGCAAGAGGCATCTGAAATAGCTCCTAATTTGACTAGAGGCTGGTATGAATTGGCAC AATTGCCTGTTCAAGATCGAATTGAATTTACAAAAGAATTTTGGTTAACAAAGCTGCCTTATCATCCTTATTTAAATGAA TTTTTAAATAAATTTTTTAGTAGGGTTGATAATATTGGGATTTTTTTAACTCAGCAGAAGTATGAAGATTCATTTGAAGT CAGTTTTGTTTACAGTCTTATCAATGACGGGGGATTTTTTCATGGTAGCATACCTGCTAGTGAACAAGAAATTAATGCTT TGCAAAAAGTGTTTCCAGACTATATTCTTCCTTCTGATTTCTTGGCTTTTCTGCAAATACATAACGGATTTGCCAAGTTA ACAGATACGGGAATCATCAAATCAATTGAAATGGCTAATGCGTATGAAGTTTTGCAAAAGCTATTAGAAAAAGAGAGTCC CATGACAACAACTAAAGGAGTTGTGGTCTATCCTCGTTCGATTATACCCTTTTACCAATCATTTGGGATGCCTTTTTTTC AATGTTTTTGGGGAGAATGGTATCCAGATCATGAAATGGGTAATGTTTATTATTCGAATTCAGCAAAAACTATTTTAGAT TGTGCGAAGCTGGATGATTGCGTAGAAACAATGGCTTTTGCAACGTTTACTGAGTGGTTAATGTTCTATCTTGAAAAAAT CGACTAA
Upstream 100 bases:
>100_bases TGAAATCATTTGAAAAAATTCAAAACTGCGGTTAATTAAGACAAATGCAATAGATAGACAATTTTCATTTATCTAAGAGA TAATCAAGGATTATTTAATT
Downstream 100 bases:
>100_bases TTTGGCTCATGTATTTAGTTAAAAAATTATATGAAGAACACGCAAAAAAACTTGGACTTGAGTTGACTGCGGGTAAAAAT GGGATAAATAGACGCATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MDRHVKEHYSCYSEESPQGHFHCVIELNENPMIDWQEASEIAPNLTRGWYELAQLPVQDRIEFTKEFWLTKLPYHPYLNE FLNKFFSRVDNIGIFLTQQKYEDSFEVSFVYSLINDGGFFHGSIPASEQEINALQKVFPDYILPSDFLAFLQIHNGFAKL TDTGIIKSIEMANAYEVLQKLLEKESPMTTTKGVVVYPRSIIPFYQSFGMPFFQCFWGEWYPDHEMGNVYYSNSAKTILD CAKLDDCVETMAFATFTEWLMFYLEKID
Sequences:
>Translated_268_residues MDRHVKEHYSCYSEESPQGHFHCVIELNENPMIDWQEASEIAPNLTRGWYELAQLPVQDRIEFTKEFWLTKLPYHPYLNE FLNKFFSRVDNIGIFLTQQKYEDSFEVSFVYSLINDGGFFHGSIPASEQEINALQKVFPDYILPSDFLAFLQIHNGFAKL TDTGIIKSIEMANAYEVLQKLLEKESPMTTTKGVVVYPRSIIPFYQSFGMPFFQCFWGEWYPDHEMGNVYYSNSAKTILD CAKLDDCVETMAFATFTEWLMFYLEKID >Mature_268_residues MDRHVKEHYSCYSEESPQGHFHCVIELNENPMIDWQEASEIAPNLTRGWYELAQLPVQDRIEFTKEFWLTKLPYHPYLNE FLNKFFSRVDNIGIFLTQQKYEDSFEVSFVYSLINDGGFFHGSIPASEQEINALQKVFPDYILPSDFLAFLQIHNGFAKL TDTGIIKSIEMANAYEVLQKLLEKESPMTTTKGVVVYPRSIIPFYQSFGMPFFQCFWGEWYPDHEMGNVYYSNSAKTILD CAKLDDCVETMAFATFTEWLMFYLEKID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31401; Mature: 31401
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRHVKEHYSCYSEESPQGHFHCVIELNENPMIDWQEASEIAPNLTRGWYELAQLPVQDR CCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHCCHHHH IEFTKEFWLTKLPYHPYLNEFLNKFFSRVDNIGIFLTQQKYEDSFEVSFVYSLINDGGFF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCEE HGSIPASEQEINALQKVFPDYILPSDFLAFLQIHNGFAKLTDTGIIKSIEMANAYEVLQK ECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LLEKESPMTTTKGVVVYPRSIIPFYQSFGMPFFQCFWGEWYPDHEMGNVYYSNSAKTILD HHHCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEECCCCHHHHH CAKLDDCVETMAFATFTEWLMFYLEKID HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDRHVKEHYSCYSEESPQGHFHCVIELNENPMIDWQEASEIAPNLTRGWYELAQLPVQDR CCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHCCHHHH IEFTKEFWLTKLPYHPYLNEFLNKFFSRVDNIGIFLTQQKYEDSFEVSFVYSLINDGGFF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCEE HGSIPASEQEINALQKVFPDYILPSDFLAFLQIHNGFAKLTDTGIIKSIEMANAYEVLQK ECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LLEKESPMTTTKGVVVYPRSIIPFYQSFGMPFFQCFWGEWYPDHEMGNVYYSNSAKTILD HHHCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEECCCCHHHHH CAKLDDCVETMAFATFTEWLMFYLEKID HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA