Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446107

Identifier: 46446107

GI number: 46446107

Start: 608972

End: 609778

Strand: Direct

Name: 46446107

Synonym: pc0473

Alternate gene names: NA

Gene position: 608972-609778 (Clockwise)

Preceding gene: 46446102

Following gene: 46446108

Centisome position: 25.22

GC content: 34.08

Gene sequence:

>807_bases
ATGGATCGACACGTTAAAGAGCATTATAGTTGTTACTCAGAAGAATCACCTCAAGGACATTTTCATTGTGTCATTGAGTT
AAATGAAAATCCTATGATTGATTGGCAAGAGGCATCTGAAATAGCTCCTAATTTGACTAGAGGCTGGTATGAATTGGCAC
AATTGCCTGTTCAAGATCGAATTGAATTTACAAAAGAATTTTGGTTAACAAAGCTGCCTTATCATCCTTATTTAAATGAA
TTTTTAAATAAATTTTTTAGTAGGGTTGATAATATTGGGATTTTTTTAACTCAGCAGAAGTATGAAGATTCATTTGAAGT
CAGTTTTGTTTACAGTCTTATCAATGACGGGGGATTTTTTCATGGTAGCATACCTGCTAGTGAACAAGAAATTAATGCTT
TGCAAAAAGTGTTTCCAGACTATATTCTTCCTTCTGATTTCTTGGCTTTTCTGCAAATACATAACGGATTTGCCAAGTTA
ACAGATACGGGAATCATCAAATCAATTGAAATGGCTAATGCGTATGAAGTTTTGCAAAAGCTATTAGAAAAAGAGAGTCC
CATGACAACAACTAAAGGAGTTGTGGTCTATCCTCGTTCGATTATACCCTTTTACCAATCATTTGGGATGCCTTTTTTTC
AATGTTTTTGGGGAGAATGGTATCCAGATCATGAAATGGGTAATGTTTATTATTCGAATTCAGCAAAAACTATTTTAGAT
TGTGCGAAGCTGGATGATTGCGTAGAAACAATGGCTTTTGCAACGTTTACTGAGTGGTTAATGTTCTATCTTGAAAAAAT
CGACTAA

Upstream 100 bases:

>100_bases
TGAAATCATTTGAAAAAATTCAAAACTGCGGTTAATTAAGACAAATGCAATAGATAGACAATTTTCATTTATCTAAGAGA
TAATCAAGGATTATTTAATT

Downstream 100 bases:

>100_bases
TTTGGCTCATGTATTTAGTTAAAAAATTATATGAAGAACACGCAAAAAAACTTGGACTTGAGTTGACTGCGGGTAAAAAT
GGGATAAATAGACGCATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MDRHVKEHYSCYSEESPQGHFHCVIELNENPMIDWQEASEIAPNLTRGWYELAQLPVQDRIEFTKEFWLTKLPYHPYLNE
FLNKFFSRVDNIGIFLTQQKYEDSFEVSFVYSLINDGGFFHGSIPASEQEINALQKVFPDYILPSDFLAFLQIHNGFAKL
TDTGIIKSIEMANAYEVLQKLLEKESPMTTTKGVVVYPRSIIPFYQSFGMPFFQCFWGEWYPDHEMGNVYYSNSAKTILD
CAKLDDCVETMAFATFTEWLMFYLEKID

Sequences:

>Translated_268_residues
MDRHVKEHYSCYSEESPQGHFHCVIELNENPMIDWQEASEIAPNLTRGWYELAQLPVQDRIEFTKEFWLTKLPYHPYLNE
FLNKFFSRVDNIGIFLTQQKYEDSFEVSFVYSLINDGGFFHGSIPASEQEINALQKVFPDYILPSDFLAFLQIHNGFAKL
TDTGIIKSIEMANAYEVLQKLLEKESPMTTTKGVVVYPRSIIPFYQSFGMPFFQCFWGEWYPDHEMGNVYYSNSAKTILD
CAKLDDCVETMAFATFTEWLMFYLEKID
>Mature_268_residues
MDRHVKEHYSCYSEESPQGHFHCVIELNENPMIDWQEASEIAPNLTRGWYELAQLPVQDRIEFTKEFWLTKLPYHPYLNE
FLNKFFSRVDNIGIFLTQQKYEDSFEVSFVYSLINDGGFFHGSIPASEQEINALQKVFPDYILPSDFLAFLQIHNGFAKL
TDTGIIKSIEMANAYEVLQKLLEKESPMTTTKGVVVYPRSIIPFYQSFGMPFFQCFWGEWYPDHEMGNVYYSNSAKTILD
CAKLDDCVETMAFATFTEWLMFYLEKID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31401; Mature: 31401

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRHVKEHYSCYSEESPQGHFHCVIELNENPMIDWQEASEIAPNLTRGWYELAQLPVQDR
CCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHCCHHHH
IEFTKEFWLTKLPYHPYLNEFLNKFFSRVDNIGIFLTQQKYEDSFEVSFVYSLINDGGFF
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCEE
HGSIPASEQEINALQKVFPDYILPSDFLAFLQIHNGFAKLTDTGIIKSIEMANAYEVLQK
ECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LLEKESPMTTTKGVVVYPRSIIPFYQSFGMPFFQCFWGEWYPDHEMGNVYYSNSAKTILD
HHHCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEECCCCHHHHH
CAKLDDCVETMAFATFTEWLMFYLEKID
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDRHVKEHYSCYSEESPQGHFHCVIELNENPMIDWQEASEIAPNLTRGWYELAQLPVQDR
CCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHCCHHHH
IEFTKEFWLTKLPYHPYLNEFLNKFFSRVDNIGIFLTQQKYEDSFEVSFVYSLINDGGFF
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCEE
HGSIPASEQEINALQKVFPDYILPSDFLAFLQIHNGFAKLTDTGIIKSIEMANAYEVLQK
ECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LLEKESPMTTTKGVVVYPRSIIPFYQSFGMPFFQCFWGEWYPDHEMGNVYYSNSAKTILD
HHHCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEECCCCHHHHH
CAKLDDCVETMAFATFTEWLMFYLEKID
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA