Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446045

Identifier: 46446045

GI number: 46446045

Start: 547458

End: 548015

Strand: Direct

Name: 46446045

Synonym: pc0411

Alternate gene names: NA

Gene position: 547458-548015 (Clockwise)

Preceding gene: 46446044

Following gene: 161611308

Centisome position: 22.67

GC content: 35.13

Gene sequence:

>558_bases
ATGCCTTCAAAACTACAACGGCATGAATGGCTAATTGTCTCTATTCTTATCACAACTCTAATTTTATTGACTGGTATGGC
TTTTTTTTCAAAAAAAAGAGTTTTGCCAATACCTCGGACAGAACACTTGTTAACAACAGAATTGGTGGATGTTACTGTTC
AGGGAGCAGCCGAGCATATAGGGATTTTTGAACTCCGTAAAGGAGCTAGGATAAAAGATCTTTGGAAGCTTTGTAAACCA
ACTTTTGATGCTGATTTAAGCAGTTTTAAACCTAATCAACTTTTGCGTGATGGACAAGTGATTAAAATTCCTTTAAAAGA
ATATTTGACGGTTTATATTAGAGGAGCCGTTCAACAAGAGGTGGTCCTCCGCGTTTTAAAAGGAACTCAGCTCAAAGATC
TTAAAGACATGATTGTGCTGCAAAAAGATGCGGATATCAAAATTCTAAATGCAAAGCGCCGTTTAAAAGATCAAGAAGTC
ATTCACATTCGATCTAAAAAAATCTCTAAAAATGCACAAAAGATATTAGATAAAAAAATCGAACCTAAAGTTGAGTGA

Upstream 100 bases:

>100_bases
CTAAGAAGAATATTTAGATATTCTATTCAAAAAAAAATTAATGTTTTTTTACAATTCATCTAGTAGACTCTTTGCAAAAC
CTTGCAAAGGAGAGAATCTT

Downstream 100 bases:

>100_bases
ATAACAATGACGTCAAAAAAGTAATTGAGTTTATAAAAACTGAATCTCTTCTTTAAGCATTTTTGAGAGTTCTTATGAAC
CAAAGCGTTGATTTTTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MPSKLQRHEWLIVSILITTLILLTGMAFFSKKRVLPIPRTEHLLTTELVDVTVQGAAEHIGIFELRKGARIKDLWKLCKP
TFDADLSSFKPNQLLRDGQVIKIPLKEYLTVYIRGAVQQEVVLRVLKGTQLKDLKDMIVLQKDADIKILNAKRRLKDQEV
IHIRSKKISKNAQKILDKKIEPKVE

Sequences:

>Translated_185_residues
MPSKLQRHEWLIVSILITTLILLTGMAFFSKKRVLPIPRTEHLLTTELVDVTVQGAAEHIGIFELRKGARIKDLWKLCKP
TFDADLSSFKPNQLLRDGQVIKIPLKEYLTVYIRGAVQQEVVLRVLKGTQLKDLKDMIVLQKDADIKILNAKRRLKDQEV
IHIRSKKISKNAQKILDKKIEPKVE
>Mature_184_residues
PSKLQRHEWLIVSILITTLILLTGMAFFSKKRVLPIPRTEHLLTTELVDVTVQGAAEHIGIFELRKGARIKDLWKLCKPT
FDADLSSFKPNQLLRDGQVIKIPLKEYLTVYIRGAVQQEVVLRVLKGTQLKDLKDMIVLQKDADIKILNAKRRLKDQEVI
HIRSKKISKNAQKILDKKIEPKVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21293; Mature: 21162

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSKLQRHEWLIVSILITTLILLTGMAFFSKKRVLPIPRTEHLLTTELVDVTVQGAAEHI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHH
GIFELRKGARIKDLWKLCKPTFDADLSSFKPNQLLRDGQVIKIPLKEYLTVYIRGAVQQE
HHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHH
VVLRVLKGTQLKDLKDMIVLQKDADIKILNAKRRLKDQEVIHIRSKKISKNAQKILDKKI
HHHHHHCCCCHHHHHHHHEEECCCCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
EPKVE
CCCCC
>Mature Secondary Structure 
PSKLQRHEWLIVSILITTLILLTGMAFFSKKRVLPIPRTEHLLTTELVDVTVQGAAEHI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHH
GIFELRKGARIKDLWKLCKPTFDADLSSFKPNQLLRDGQVIKIPLKEYLTVYIRGAVQQE
HHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHH
VVLRVLKGTQLKDLKDMIVLQKDADIKILNAKRRLKDQEVIHIRSKKISKNAQKILDKKI
HHHHHHCCCCHHHHHHHHEEECCCCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
EPKVE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA