Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445682

Identifier: 46445682

GI number: 46445682

Start: 85501

End: 87096

Strand: Reverse

Name: 46445682

Synonym: pc0048

Alternate gene names: NA

Gene position: 87096-85501 (Counterclockwise)

Preceding gene: 46445683

Following gene: 46445680

Centisome position: 3.61

GC content: 33.4

Gene sequence:

>1596_bases
TTGACTATTCATAATCTAAGGTTTACTCCTAAAATTACTTTCTCCAATCCAGCTACCTACTACTATGAATCGAATAACTG
TTTAAAGTTCTCTGAACGTGTTAGTTTATTTTGCATAACAATCTTCCAGAGTTTCCTAAACCTATTTTTTGGTTATCTCA
AAAAAGATCAGCTTCAAACTCCATGGAGAGAAAACTTTTGGAGCAGAAAAGAAATTACCATTCCCAAATTTATTACAAGT
CGCCCTCCATCATCTGATATATCTTTAACAAGAATCCGCTCTCAGGAAACTATTAATAATCTTGAGTACGAAAACGAAGT
TTTATTAGAACCTTCAAATACCCTAGAAGGAATTGAGGCATTTGCAATTCAATCTTCTAGTCTTTCACCTTTACCTCAAG
TATTTAAAGTAAGATTTCAAAATAACACTTTTCTAAACATTACAAGTTCTCAAAAATCTTTGTTAATGGAAAAATCGCCC
TATTTTAGGGTCCTTTGGTCGGGAAATTTTAAAGAAACTCTTCAAAATCCTCTCGTTTTGACACAAAAAGAAGAGTTTAC
CAGTCTACTCTTTTGTCTAATGAATGCTAATTTTAAAGTTCCTGTGGAAGACATTACTTCTTTCATTCAGCTAGCAGATT
ATTATCTACTGACAGATGTTGTGAAAAATTTAGAAGAACAGCTGATTGATGCCTATAAATCAGAGGAACTTGACTTATTT
AATTTCAACGAAGAAAACCTAGCAAAATTAAGAGAATCCTTAAATTTCGCGCATCAATATCGCTTAAGTGCTTTAAAAAA
TTATTTACAGCCCATAGTTGCAAGTTTATTATTAAACCAGACGCCTCATTTAGCAGAATTTAAAAAAATTTTAAATTACT
TCTCAAATGAGATAGAAAAACTCAATTTTTCAGAAAATGCCCACTTGACCGATGCCCATCTCTTAGCGTTAAAAAATTGT
AAAAATTTAAAAGCACTTCATCTTCAGGCCTGCCACAATCTAACTGACGATGGATTAGCAAGTTTGACATCCTTAACAAA
TTTGCAATATTTGAATTTAAGCTGTTGCGATAAGCTCACCAATAAAGGATTAGCGCATTTTAAATCTTTAATAGCTTTAC
AGTATTTGAACCTCAGTGGATGCGCTTTTATTACTGACGCAGGATTAGCGCATTTAAAACCCTTAGTAGCTTTACAGTAT
TTGAACCTCAGTGGATGCGCTTTTATTACTGACGCAGGATTAGCGCATTTAAAACCCTTAGTAGCTTTACAGTATTTGAA
CCTCAGTGGATGCGCTTTTATTACTGACGCAGGATTAGCGCATTTGACACCCTTAGTAACTTTAAAACATTTAGATCTGA
GCTGGTGCAATAGTCTCACCAATGCTGGATTAGAACGTTTAGCATCCTTAGTGGCTTTACAACATTTAAATCTGAGCGGA
TGCATTTATCTTACTGAAGCTGGGCTAACACATTTGACGTCCTTAACTAATTTACAGCAACTAAATTTGAATCATTGCGA
ACATTTCGCTGATGTTAGATTTAAGTTAACGCATTTTAGAACTTTATTAGCTAATCCAAATTTAATTTTGATTTAA

Upstream 100 bases:

>100_bases
AATTTCTTTCAAATTTAATTGGGTCTTTATTGCAATAATATTCACTCATATTTTATATTAAAAAATTAAATACATTATTT
ATACAATTTGGATGGTGAAT

Downstream 100 bases:

>100_bases
AAAACCATTCTTATAACGATCTGAATTAGCACATTTGACATCCTTAAAAGCTAAACTGTATCATAGAAATAGCTAAATTA
TTGATGAAGTTCCTAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MTIHNLRFTPKITFSNPATYYYESNNCLKFSERVSLFCITIFQSFLNLFFGYLKKDQLQTPWRENFWSRKEITIPKFITS
RPPSSDISLTRIRSQETINNLEYENEVLLEPSNTLEGIEAFAIQSSSLSPLPQVFKVRFQNNTFLNITSSQKSLLMEKSP
YFRVLWSGNFKETLQNPLVLTQKEEFTSLLFCLMNANFKVPVEDITSFIQLADYYLLTDVVKNLEEQLIDAYKSEELDLF
NFNEENLAKLRESLNFAHQYRLSALKNYLQPIVASLLLNQTPHLAEFKKILNYFSNEIEKLNFSENAHLTDAHLLALKNC
KNLKALHLQACHNLTDDGLASLTSLTNLQYLNLSCCDKLTNKGLAHFKSLIALQYLNLSGCAFITDAGLAHLKPLVALQY
LNLSGCAFITDAGLAHLKPLVALQYLNLSGCAFITDAGLAHLTPLVTLKHLDLSWCNSLTNAGLERLASLVALQHLNLSG
CIYLTEAGLTHLTSLTNLQQLNLNHCEHFADVRFKLTHFRTLLANPNLILI

Sequences:

>Translated_531_residues
MTIHNLRFTPKITFSNPATYYYESNNCLKFSERVSLFCITIFQSFLNLFFGYLKKDQLQTPWRENFWSRKEITIPKFITS
RPPSSDISLTRIRSQETINNLEYENEVLLEPSNTLEGIEAFAIQSSSLSPLPQVFKVRFQNNTFLNITSSQKSLLMEKSP
YFRVLWSGNFKETLQNPLVLTQKEEFTSLLFCLMNANFKVPVEDITSFIQLADYYLLTDVVKNLEEQLIDAYKSEELDLF
NFNEENLAKLRESLNFAHQYRLSALKNYLQPIVASLLLNQTPHLAEFKKILNYFSNEIEKLNFSENAHLTDAHLLALKNC
KNLKALHLQACHNLTDDGLASLTSLTNLQYLNLSCCDKLTNKGLAHFKSLIALQYLNLSGCAFITDAGLAHLKPLVALQY
LNLSGCAFITDAGLAHLKPLVALQYLNLSGCAFITDAGLAHLTPLVTLKHLDLSWCNSLTNAGLERLASLVALQHLNLSG
CIYLTEAGLTHLTSLTNLQQLNLNHCEHFADVRFKLTHFRTLLANPNLILI
>Mature_530_residues
TIHNLRFTPKITFSNPATYYYESNNCLKFSERVSLFCITIFQSFLNLFFGYLKKDQLQTPWRENFWSRKEITIPKFITSR
PPSSDISLTRIRSQETINNLEYENEVLLEPSNTLEGIEAFAIQSSSLSPLPQVFKVRFQNNTFLNITSSQKSLLMEKSPY
FRVLWSGNFKETLQNPLVLTQKEEFTSLLFCLMNANFKVPVEDITSFIQLADYYLLTDVVKNLEEQLIDAYKSEELDLFN
FNEENLAKLRESLNFAHQYRLSALKNYLQPIVASLLLNQTPHLAEFKKILNYFSNEIEKLNFSENAHLTDAHLLALKNCK
NLKALHLQACHNLTDDGLASLTSLTNLQYLNLSCCDKLTNKGLAHFKSLIALQYLNLSGCAFITDAGLAHLKPLVALQYL
NLSGCAFITDAGLAHLKPLVALQYLNLSGCAFITDAGLAHLTPLVTLKHLDLSWCNSLTNAGLERLASLVALQHLNLSGC
IYLTEAGLTHLTSLTNLQQLNLNHCEHFADVRFKLTHFRTLLANPNLILI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI284447308, Length=328, Percent_Identity=30.4878048780488, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI22748931, Length=209, Percent_Identity=33.0143540669856, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI161333852, Length=248, Percent_Identity=29.4354838709677, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI6912466, Length=230, Percent_Identity=28.695652173913, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI161333854, Length=254, Percent_Identity=28.740157480315, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI284447314, Length=314, Percent_Identity=30.5732484076433, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI296531375, Length=357, Percent_Identity=28.8515406162465, Blast_Score=86, Evalue=9e-17,
Organism=Homo sapiens, GI27734755, Length=232, Percent_Identity=33.6206896551724, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI289666746, Length=228, Percent_Identity=35.9649122807018, Blast_Score=79, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI25151694, Length=216, Percent_Identity=32.4074074074074, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25151696, Length=216, Percent_Identity=32.4074074074074, Blast_Score=76, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6322549, Length=110, Percent_Identity=36.3636363636364, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI17647819, Length=228, Percent_Identity=31.5789473684211, Blast_Score=102, Evalue=8e-22,
Organism=Drosophila melanogaster, GI21357913, Length=227, Percent_Identity=32.5991189427313, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24662818, Length=211, Percent_Identity=37.4407582938389, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI161076545, Length=318, Percent_Identity=27.6729559748428, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI161076547, Length=318, Percent_Identity=27.6729559748428, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI161076549, Length=318, Percent_Identity=27.0440251572327, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24652783, Length=318, Percent_Identity=27.6729559748428, Blast_Score=75, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60320; Mature: 60189

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHNLRFTPKITFSNPATYYYESNNCLKFSERVSLFCITIFQSFLNLFFGYLKKDQLQT
CCEECEEECEEEEECCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PWRENFWSRKEITIPKFITSRPPSSDISLTRIRSQETINNLEYENEVLLEPSNTLEGIEA
CHHHCCCCCCCCCCCHHHCCCCCCCCCEEEECCCHHHHHCCCCCCEEEECCCCHHHHHHH
FAIQSSSLSPLPQVFKVRFQNNTFLNITSSQKSLLMEKSPYFRVLWSGNFKETLQNPLVL
HEECCCCCCCCHHHHEEEECCCEEEEEECCHHHHHHCCCCCEEEEECCCHHHHHCCCEEE
TQKEEFTSLLFCLMNANFKVPVEDITSFIQLADYYLLTDVVKNLEEQLIDAYKSEELDLF
ECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
NFNEENLAKLRESLNFAHQYRLSALKNYLQPIVASLLLNQTPHLAEFKKILNYFSNEIEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
LNFSENAHLTDAHLLALKNCKNLKALHLQACHNLTDDGLASLTSLTNLQYLNLSCCDKLT
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEECHHHHHHHH
NKGLAHFKSLIALQYLNLSGCAFITDAGLAHLKPLVALQYLNLSGCAFITDAGLAHLKPL
HHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH
VALQYLNLSGCAFITDAGLAHLTPLVTLKHLDLSWCNSLTNAGLERLASLVALQHLNLSG
HHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
CIYLTEAGLTHLTSLTNLQQLNLNHCEHFADVRFKLTHFRTLLANPNLILI
EEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
>Mature Secondary Structure 
TIHNLRFTPKITFSNPATYYYESNNCLKFSERVSLFCITIFQSFLNLFFGYLKKDQLQT
CEECEEECEEEEECCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PWRENFWSRKEITIPKFITSRPPSSDISLTRIRSQETINNLEYENEVLLEPSNTLEGIEA
CHHHCCCCCCCCCCCHHHCCCCCCCCCEEEECCCHHHHHCCCCCCEEEECCCCHHHHHHH
FAIQSSSLSPLPQVFKVRFQNNTFLNITSSQKSLLMEKSPYFRVLWSGNFKETLQNPLVL
HEECCCCCCCCHHHHEEEECCCEEEEEECCHHHHHHCCCCCEEEEECCCHHHHHCCCEEE
TQKEEFTSLLFCLMNANFKVPVEDITSFIQLADYYLLTDVVKNLEEQLIDAYKSEELDLF
ECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
NFNEENLAKLRESLNFAHQYRLSALKNYLQPIVASLLLNQTPHLAEFKKILNYFSNEIEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
LNFSENAHLTDAHLLALKNCKNLKALHLQACHNLTDDGLASLTSLTNLQYLNLSCCDKLT
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEECHHHHHHHH
NKGLAHFKSLIALQYLNLSGCAFITDAGLAHLKPLVALQYLNLSGCAFITDAGLAHLKPL
HHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH
VALQYLNLSGCAFITDAGLAHLTPLVTLKHLDLSWCNSLTNAGLERLASLVALQHLNLSG
HHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
CIYLTEAGLTHLTSLTNLQQLNLNHCEHFADVRFKLTHFRTLLANPNLILI
EEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA