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The map label for this gene is 45659244

Identifier: 45659244

GI number: 45659244

Start: 4202746

End: 4203153

Strand: Reverse

Name: 45659244

Synonym: LIC13427

Alternate gene names: NA

Gene position: 4203153-4202746 (Counterclockwise)

Preceding gene: 45659245

Following gene: 45659232

Centisome position: 98.27

GC content: 23.28

Gene sequence:

>408_bases
ATGAGGAATAAAAAATCAAATTTAATTCTAATATCTTCAAACCAGAAAATTATTATCGTAGATGATAATCAAAAATATGC
ACAACAATTAAGTTCTTTATTACTTTCAAAAAAAGAAACGATACAAATATCATGTGCTGAAAATATTCGTAGTGGATATA
AAAAAATCTTAAAAGGAAACTTTGAAGTTTTTTTCTGTGATATTACAATAAGAAAAAGATTAGTTGGTTTTTATCTGGTT
CATAGATTAAGAAAACGAAACGATAGAATTAAAATTATATTGATGTCTACTATCTTTGATTATCGTATTTTTTTCATCCT
GTTTTATCGTATTATAAAATTCAGTTTTGCTTTAAATGGCATTTGTAGAAAATCAGACGTTATAAATGGAAAGTTGGTAA
TTTATTAA

Upstream 100 bases:

>100_bases
ATGGATTTTACTTATACGACATACATTCACTATATAATGGTATTCAATATTTTGTTTTGGAATTATACCGTAGGAGGAAA
TTTTAAAGTAGTTAGGGTTT

Downstream 100 bases:

>100_bases
TCGAACTATTTCATCAGGTAATAAATTTGAATTTTTGATTTTAATATATTTAATATTTTTTTCTTTTAGCTTTTTAGTAA
GAATATTCTTATTTAATGAA

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MRNKKSNLILISSNQKIIIVDDNQKYAQQLSSLLLSKKETIQISCAENIRSGYKKILKGNFEVFFCDITIRKRLVGFYLV
HRLRKRNDRIKIILMSTIFDYRIFFILFYRIIKFSFALNGICRKSDVINGKLVIY

Sequences:

>Translated_135_residues
MRNKKSNLILISSNQKIIIVDDNQKYAQQLSSLLLSKKETIQISCAENIRSGYKKILKGNFEVFFCDITIRKRLVGFYLV
HRLRKRNDRIKIILMSTIFDYRIFFILFYRIIKFSFALNGICRKSDVINGKLVIY
>Mature_135_residues
MRNKKSNLILISSNQKIIIVDDNQKYAQQLSSLLLSKKETIQISCAENIRSGYKKILKGNFEVFFCDITIRKRLVGFYLV
HRLRKRNDRIKIILMSTIFDYRIFFILFYRIIKFSFALNGICRKSDVINGKLVIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15992; Mature: 15992

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNKKSNLILISSNQKIIIVDDNQKYAQQLSSLLLSKKETIQISCAENIRSGYKKILKGN
CCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCC
FEVFFCDITIRKRLVGFYLVHRLRKRNDRIKIILMSTIFDYRIFFILFYRIIKFSFALNG
CEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
ICRKSDVINGKLVIY
HHCCCCCCCCEEEEC
>Mature Secondary Structure
MRNKKSNLILISSNQKIIIVDDNQKYAQQLSSLLLSKKETIQISCAENIRSGYKKILKGN
CCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCC
FEVFFCDITIRKRLVGFYLVHRLRKRNDRIKIILMSTIFDYRIFFILFYRIIKFSFALNG
CEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
ICRKSDVINGKLVIY
HHCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA