Click here to switch to the map view.

The map label for this gene is 45659136

Identifier: 45659136

GI number: 45659136

Start: 4065708

End: 4066490

Strand: Reverse

Name: 45659136

Synonym: LIC13317

Alternate gene names: NA

Gene position: 4066490-4065708 (Counterclockwise)

Preceding gene: 45659139

Following gene: 45659135

Centisome position: 95.07

GC content: 35.5

Gene sequence:

>783_bases
ATGAAAACAAATCGAATGATGGAGAAGGATTTTCAAGAGCACCTTTCTAAAGCGACTCCTTCAAAACCGTTTCTATTTTT
TAATCGAGTCAATTGTATTTACGACGGATCGAAAATCATTTGGAGAGGCTGCCCGCCCGAAAACGTGGATAAGAGTAATT
TAGATCTCAACGCCCTGCAAAGTCATTCCGATTTTACAATCGATTTTATGAAAGGTTATGAAGATCGCATTCTTGAAGAT
GTTGATCCGTTTTCTCTGCGAAAAATAAATTGGAGATTATTGGCAGATGTACGTTATGTGATTCAAGATGGAATCATTTT
AAAAGGAATAGACGGAGCAAGTTTTCGGTCGTTGAGTAAGAGTCCCAGTGAGATATTTTTCAAAGATAAAAAGGCGGTTT
ATGTCGAAAAATTTGGAAAGTTGAAAAAGATTGATAACGCGGACCCTGAGACCTTTAAAAAAATAGGATTCTCTTATGCA
AAAGATAAGAATCATTTTTTTTGTGAAGATGTCGAACTCCCTGGTTTATCCGAAAACTATACGATCAATGTATGCGGTTT
TTTGTATGATGATACTATAATCTATCACTATGATTTTAGAATCGATGTGGATACAAAGACCTTTGAAATTTTGGATTTCG
AAGAACATTCTAAAGCTATAAATCCTTTTATGGGTCCGTTCTTGTTAAGAGACAAAATGGGAACCTATCTTTACAAAGAT
CGTTCGAAAGAATTGATTCCAACGGACGACACAACTTCTGTGATTCGAAATCGAGGTTATTAG

Upstream 100 bases:

>100_bases
GATGGATTCGCAATTCTTTTTTCTCCAGGGATTCGAGTTGCGTTCACGCAGGAAATTGTGTATTGTTGGATTCTTGTCTT
TTTAAGCTAGGATTTAATGG

Downstream 100 bases:

>100_bases
GTTTATTGAATATGACTCATCAGGAATGGTATTTTTTGTCCGGAAAATGAAGAGCCGACAATCTTTCCGCCGTTCAAGTT
CGCTGATTTTGATTCGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKTNRMMEKDFQEHLSKATPSKPFLFFNRVNCIYDGSKIIWRGCPPENVDKSNLDLNALQSHSDFTIDFMKGYEDRILED
VDPFSLRKINWRLLADVRYVIQDGIILKGIDGASFRSLSKSPSEIFFKDKKAVYVEKFGKLKKIDNADPETFKKIGFSYA
KDKNHFFCEDVELPGLSENYTINVCGFLYDDTIIYHYDFRIDVDTKTFEILDFEEHSKAINPFMGPFLLRDKMGTYLYKD
RSKELIPTDDTTSVIRNRGY

Sequences:

>Translated_260_residues
MKTNRMMEKDFQEHLSKATPSKPFLFFNRVNCIYDGSKIIWRGCPPENVDKSNLDLNALQSHSDFTIDFMKGYEDRILED
VDPFSLRKINWRLLADVRYVIQDGIILKGIDGASFRSLSKSPSEIFFKDKKAVYVEKFGKLKKIDNADPETFKKIGFSYA
KDKNHFFCEDVELPGLSENYTINVCGFLYDDTIIYHYDFRIDVDTKTFEILDFEEHSKAINPFMGPFLLRDKMGTYLYKD
RSKELIPTDDTTSVIRNRGY
>Mature_260_residues
MKTNRMMEKDFQEHLSKATPSKPFLFFNRVNCIYDGSKIIWRGCPPENVDKSNLDLNALQSHSDFTIDFMKGYEDRILED
VDPFSLRKINWRLLADVRYVIQDGIILKGIDGASFRSLSKSPSEIFFKDKKAVYVEKFGKLKKIDNADPETFKKIGFSYA
KDKNHFFCEDVELPGLSENYTINVCGFLYDDTIIYHYDFRIDVDTKTFEILDFEEHSKAINPFMGPFLLRDKMGTYLYKD
RSKELIPTDDTTSVIRNRGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30402; Mature: 30402

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNRMMEKDFQEHLSKATPSKPFLFFNRVNCIYDGSKIIWRGCPPENVDKSNLDLNALQ
CCCCHHHHHHHHHHHHHCCCCCCEEEEECEEEEEECCEEEECCCCCCCCCCCCCCHHHHC
SHSDFTIDFMKGYEDRILEDVDPFSLRKINWRLLADVRYVIQDGIILKGIDGASFRSLSK
CCCCEEEHHHHCCHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCEEEEECCCCHHHHHCC
SPSEIFFKDKKAVYVEKFGKLKKIDNADPETFKKIGFSYAKDKNHFFCEDVELPGLSENY
CCHHEEEECCCCHHHHHHCCHHCCCCCCHHHHHHHCCHHCCCCCCEEEECCCCCCCCCCE
TINVCGFLYDDTIIYHYDFRIDVDTKTFEILDFEEHSKAINPFMGPFLLRDKMGTYLYKD
EEEEEEEEECCEEEEEEEEEEEECCCEEEEEECHHHHHHCCHHHCHHHHHHHHCCCEECC
RSKELIPTDDTTSVIRNRGY
CCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MKTNRMMEKDFQEHLSKATPSKPFLFFNRVNCIYDGSKIIWRGCPPENVDKSNLDLNALQ
CCCCHHHHHHHHHHHHHCCCCCCEEEEECEEEEEECCEEEECCCCCCCCCCCCCCHHHHC
SHSDFTIDFMKGYEDRILEDVDPFSLRKINWRLLADVRYVIQDGIILKGIDGASFRSLSK
CCCCEEEHHHHCCHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCEEEEECCCCHHHHHCC
SPSEIFFKDKKAVYVEKFGKLKKIDNADPETFKKIGFSYAKDKNHFFCEDVELPGLSENY
CCHHEEEECCCCHHHHHHCCHHCCCCCCHHHHHHHCCHHCCCCCCEEEECCCCCCCCCCE
TINVCGFLYDDTIIYHYDFRIDVDTKTFEILDFEEHSKAINPFMGPFLLRDKMGTYLYKD
EEEEEEEEECCEEEEEEEEEEEECCCEEEEEECHHHHHHCCHHHCHHHHHHHHCCCEECC
RSKELIPTDDTTSVIRNRGY
CCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA