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The map label for this gene is 45659110

Identifier: 45659110

GI number: 45659110

Start: 4033278

End: 4034408

Strand: Reverse

Name: 45659110

Synonym: LIC13289

Alternate gene names: NA

Gene position: 4034408-4033278 (Counterclockwise)

Preceding gene: 45659111

Following gene: 45659109

Centisome position: 94.32

GC content: 32.18

Gene sequence:

>1131_bases
GTGAAGTCATTCTTTAGTTTGATTGAGCAAATTTATAAAGATAGAGATTATTTAACTCGCAAACGAGCTACTCATCTTTT
TGTTTTTAATATTGCTGCGTCACTCTTGGGAGTTTCATCCGCGGTTTTTCTATGGTTTGCCAAAGGAGAACTTTTTAGAG
TGGGATTTGCCGTTATGACGTTTGCATCTTTGATTTCTTTTATACTATTATTGCGAAAAAAATTTGAGCTGGCTTTAAAT
ATAATTTTATTTGCAACTATTGTTTCTGTAACTGCGGGTTGGTTTTGGGGAATTCCTAATGCGGGTTCGGACGTAGGTAA
TAAAAATATCATTCTCAGTATATTTATTATGATTTTTTTATTTTTTACGGACGTTAAAAAAACCATCTTTATCATGTTAT
ACTGTCTTATTTTAATTTTCATAGATGAGTTTTATCTCAAAGAACACGATGTGGTTTACACAGCGGATCGAATCGGTTTA
TTTTTTATGTTTTCAGTAATTTTGATTCTCACGGTAAGAGCTTTATATGGATCCGTTCAAGAAAAGAACGAATTGATACA
AGAAATTCATCATAGAGTTAGAAATAATCTTCAGGTAATTTCCGGTTTAGTGGAAATGCATAGTGGGTCTGGTAAAGAGA
ATCTGCAAATCATATTATCCGATTTTCAAAATCGTATATTAGCAATATCTGAAGTTCATAATTATCTATATAAGTCCGAA
AACTATTTCGAAATCGATTTTGTCGAGGTGATGGATAAGATTATTCTAAATCTTTCTCATAGATTGGGAAAACGTTCGAT
CAAGATAGAAACTGAAGCTGAGTCTACTTTTTTAAGAATCGAAAATGCGATTCCTTGTGCTATGATTTTCAACGAATTGT
TATCCAATTCTTTAAAACACGCTTTTCGTTCGGAAAAAGGAACCGTTCAAATTTCGTTTCGAAAAAAAGGAGATAAATAT
TACCTTCAAGTTTCTGACAATGGTTCAGGAATCAAGGATTTTAAAATTTGGTCCAAACCGAAAACGGCTGGTTTCACTTT
GATACAAATATTAACAAAACAGATTAAAGGTCGTTTTCAAATTTTCTCTGAAGGCGGTTTTACTACGGTTTTAGAGTTCA
ACTCAATCTAA

Upstream 100 bases:

>100_bases
AAATTTGTTTTAAATGGGATGGTATCTTTTTAACGAATTCCGTCCTATTATTTTAGAAGAAAATAATACTTTAAATATTT
CTTCTAAGCGGAGTTAAAAG

Downstream 100 bases:

>100_bases
AAAAGGCTAAACAAGTTATAGTTTTATAATAACTGAGTGATGTTAGAAATGAATGCCCATCTAATTTCTCAAAAAACTGT
TCTTGTGTGTAAATTCACTA

Product: histidine kinase sensor protein

Products: NA

Alternate protein names: Sensory Transduction Histidine Kinase; Two-Component Sensor Histidine Kinase; Sensor Histidine Kinase; Multisensor Signal Transduction Histidine Kinase; Histidine Kinase Sensor Protein; Histidine Kinase Family; PAS Sensor Protein; Signal-Transducing Histidine Kinase; Sensory Transduction Regulatory Protein; Sensory Box Histidine Kinase; Histidine Kinase Dimerisation/Phosphoacceptor; Two Component System Sensor Histidine Kinase; Histidine Kinase/Response Regulator Hybrid Protein; Two-Component Hybrid Sensor And Regulator; Ethylene Response Sensor Protein; Response Regulator; Histidine Kinase Of A Two-Component Regulator System; Two Component Sensor Histidine Kinase; PAS Fold Family; Two-Component Sensor Protein; Multi-Sensor Signal Transduction Multi-Kinase; Periplasmic Sensor Signal Transduction Histidine Kinase; Two-Component Histidine Kinase; Sensor Histidine Kinase And Response Regulator Protein; Two-Component System Sensor Histidine Kinase

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKSFFSLIEQIYKDRDYLTRKRATHLFVFNIAASLLGVSSAVFLWFAKGELFRVGFAVMTFASLISFILLLRKKFELALN
IILFATIVSVTAGWFWGIPNAGSDVGNKNIILSIFIMIFLFFTDVKKTIFIMLYCLILIFIDEFYLKEHDVVYTADRIGL
FFMFSVILILTVRALYGSVQEKNELIQEIHHRVRNNLQVISGLVEMHSGSGKENLQIILSDFQNRILAISEVHNYLYKSE
NYFEIDFVEVMDKIILNLSHRLGKRSIKIETEAESTFLRIENAIPCAMIFNELLSNSLKHAFRSEKGTVQISFRKKGDKY
YLQVSDNGSGIKDFKIWSKPKTAGFTLIQILTKQIKGRFQIFSEGGFTTVLEFNSI

Sequences:

>Translated_376_residues
MKSFFSLIEQIYKDRDYLTRKRATHLFVFNIAASLLGVSSAVFLWFAKGELFRVGFAVMTFASLISFILLLRKKFELALN
IILFATIVSVTAGWFWGIPNAGSDVGNKNIILSIFIMIFLFFTDVKKTIFIMLYCLILIFIDEFYLKEHDVVYTADRIGL
FFMFSVILILTVRALYGSVQEKNELIQEIHHRVRNNLQVISGLVEMHSGSGKENLQIILSDFQNRILAISEVHNYLYKSE
NYFEIDFVEVMDKIILNLSHRLGKRSIKIETEAESTFLRIENAIPCAMIFNELLSNSLKHAFRSEKGTVQISFRKKGDKY
YLQVSDNGSGIKDFKIWSKPKTAGFTLIQILTKQIKGRFQIFSEGGFTTVLEFNSI
>Mature_376_residues
MKSFFSLIEQIYKDRDYLTRKRATHLFVFNIAASLLGVSSAVFLWFAKGELFRVGFAVMTFASLISFILLLRKKFELALN
IILFATIVSVTAGWFWGIPNAGSDVGNKNIILSIFIMIFLFFTDVKKTIFIMLYCLILIFIDEFYLKEHDVVYTADRIGL
FFMFSVILILTVRALYGSVQEKNELIQEIHHRVRNNLQVISGLVEMHSGSGKENLQIILSDFQNRILAISEVHNYLYKSE
NYFEIDFVEVMDKIILNLSHRLGKRSIKIETEAESTFLRIENAIPCAMIFNELLSNSLKHAFRSEKGTVQISFRKKGDKY
YLQVSDNGSGIKDFKIWSKPKTAGFTLIQILTKQIKGRFQIFSEGGFTTVLEFNSI

Specific function: Unknown

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43265; Mature: 43265

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFFSLIEQIYKDRDYLTRKRATHLFVFNIAASLLGVSSAVFLWFAKGELFRVGFAVMT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHH
FASLISFILLLRKKFELALNIILFATIVSVTAGWFWGIPNAGSDVGNKNIILSIFIMIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
FFTDVKKTIFIMLYCLILIFIDEFYLKEHDVVYTADRIGLFFMFSVILILTVRALYGSVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHH
EKNELIQEIHHRVRNNLQVISGLVEMHSGSGKENLQIILSDFQNRILAISEVHNYLYKSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
NYFEIDFVEVMDKIILNLSHRLGKRSIKIETEAESTFLRIENAIPCAMIFNELLSNSLKH
CEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHEECCCCCCHHHHHHHHHHHHHHH
AFRSEKGTVQISFRKKGDKYYLQVSDNGSGIKDFKIWSKPKTAGFTLIQILTKQIKGRFQ
HHCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCEE
IFSEGGFTTVLEFNSI
EEECCCEEEEEEECCC
>Mature Secondary Structure
MKSFFSLIEQIYKDRDYLTRKRATHLFVFNIAASLLGVSSAVFLWFAKGELFRVGFAVMT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHH
FASLISFILLLRKKFELALNIILFATIVSVTAGWFWGIPNAGSDVGNKNIILSIFIMIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
FFTDVKKTIFIMLYCLILIFIDEFYLKEHDVVYTADRIGLFFMFSVILILTVRALYGSVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHH
EKNELIQEIHHRVRNNLQVISGLVEMHSGSGKENLQIILSDFQNRILAISEVHNYLYKSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
NYFEIDFVEVMDKIILNLSHRLGKRSIKIETEAESTFLRIENAIPCAMIFNELLSNSLKH
CEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHEECCCCCCHHHHHHHHHHHHHHH
AFRSEKGTVQISFRKKGDKYYLQVSDNGSGIKDFKIWSKPKTAGFTLIQILTKQIKGRFQ
HHCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCEE
IFSEGGFTTVLEFNSI
EEECCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA