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The map label for this gene is yebA [C]

Identifier: 45659104

GI number: 45659104

Start: 4027063

End: 4028034

Strand: Reverse

Name: yebA [C]

Synonym: LIC13283

Alternate gene names: 45659104

Gene position: 4028034-4027063 (Counterclockwise)

Preceding gene: 45659105

Following gene: 45659103

Centisome position: 94.17

GC content: 36.63

Gene sequence:

>972_bases
ATGGAAAAAGAAATCCGCAAACGGTTGGATCGGGTTAAAGAGAAGGGTCATCAAAGATTAACTGTACTTCTCATTCCTCA
CGGTTTCGATAAATCCTTTCATTTTCAAATATCGGTTTTTACGATTTTTTTTCTTTTTAGTCTTTTGATTTCCATTTTAG
GAATCGCAGTTTTCGGAATTGTAAAATACAATAATACAAGAAAACAAATCAACGCACTATCTCAAGTTTATGGGAAATAT
TTCGACGAATACATTGAATATTCGGAACAATTAGAAGGAGTTCAAGACGACTTTCTGGCTCTTACGGAGAATTTAGAGGA
GATTTATTCTCTAATCGATGGACATGGGGACGAGATGCTAAAACTTCCCGATGAGTCTGATATAGAAACGATCGCACTTG
CGGAGTTAAAAACCGAAGAATCTGCCGACAAAGATCTTATGTTAGGAAGAAGTTATCTTTCCGAAATCTACGGATATAGA
ACTGCGCGGGTTTATATGGATAAACATCGCCCTTTAGTGGATAGCGTTTACGATTTTTTAAATCTCAGATACGATGTAAT
GGATGCGATCCCTTTTGGAGAACCTTTGTATTCTTACAACCTTACTTCTTATTTTGGAACTAGAAGATCGCCTACTACTG
GTTATATGGAATATCATGACGGAATCGATTTAGCAAATGTTCCCGGAACTCCAATTTATGCTACTGGTAATGGAAAGATT
CATCGAGTCATTTATTCTAACCGAGGTTACGGAAATCATATCGTAATTCAACATGCAAATGGTTACTTTTCACTCTTTGG
ACATTGTACTAAAATTTTTGTAAAAGACGGTCAACAGATTCGAAAAGGAAACTTGATCGCTACAGTCGGTTCCACAGGAA
ACGTTACCGGACCTCATTTACATTATGAAATTTGGATTGGAGAATCCAATCGCACCGATCCTATGGAATATCTCAAAGTT
CCAGTTTATTAA

Upstream 100 bases:

>100_bases
TTTAGTCTCATTAGATCTACATAAGTAATACTTATGGGCTTGGTTTCCACTTGACCTGTATTTCCCCTAGGTAGACTCTT
AGCCAGGAGTCTTAAATCCT

Downstream 100 bases:

>100_bases
TCTCAATCCGGATACAATATGCCAAAGAAGAAGGAAGACTCCCAGAAAACTCTTTCGGAGAAAGAGGCCAAGGGACTTAT
AGCCAAACTCTCCGACGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MEKEIRKRLDRVKEKGHQRLTVLLIPHGFDKSFHFQISVFTIFFLFSLLISILGIAVFGIVKYNNTRKQINALSQVYGKY
FDEYIEYSEQLEGVQDDFLALTENLEEIYSLIDGHGDEMLKLPDESDIETIALAELKTEESADKDLMLGRSYLSEIYGYR
TARVYMDKHRPLVDSVYDFLNLRYDVMDAIPFGEPLYSYNLTSYFGTRRSPTTGYMEYHDGIDLANVPGTPIYATGNGKI
HRVIYSNRGYGNHIVIQHANGYFSLFGHCTKIFVKDGQQIRKGNLIATVGSTGNVTGPHLHYEIWIGESNRTDPMEYLKV
PVY

Sequences:

>Translated_323_residues
MEKEIRKRLDRVKEKGHQRLTVLLIPHGFDKSFHFQISVFTIFFLFSLLISILGIAVFGIVKYNNTRKQINALSQVYGKY
FDEYIEYSEQLEGVQDDFLALTENLEEIYSLIDGHGDEMLKLPDESDIETIALAELKTEESADKDLMLGRSYLSEIYGYR
TARVYMDKHRPLVDSVYDFLNLRYDVMDAIPFGEPLYSYNLTSYFGTRRSPTTGYMEYHDGIDLANVPGTPIYATGNGKI
HRVIYSNRGYGNHIVIQHANGYFSLFGHCTKIFVKDGQQIRKGNLIATVGSTGNVTGPHLHYEIWIGESNRTDPMEYLKV
PVY
>Mature_323_residues
MEKEIRKRLDRVKEKGHQRLTVLLIPHGFDKSFHFQISVFTIFFLFSLLISILGIAVFGIVKYNNTRKQINALSQVYGKY
FDEYIEYSEQLEGVQDDFLALTENLEEIYSLIDGHGDEMLKLPDESDIETIALAELKTEESADKDLMLGRSYLSEIYGYR
TARVYMDKHRPLVDSVYDFLNLRYDVMDAIPFGEPLYSYNLTSYFGTRRSPTTGYMEYHDGIDLANVPGTPIYATGNGKI
HRVIYSNRGYGNHIVIQHANGYFSLFGHCTKIFVKDGQQIRKGNLIATVGSTGNVTGPHLHYEIWIGESNRTDPMEYLKV
PVY

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=112, Percent_Identity=40.1785714285714, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI87082174, Length=116, Percent_Identity=39.6551724137931, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1789099, Length=104, Percent_Identity=40.3846153846154, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 37097; Mature: 37097

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKEIRKRLDRVKEKGHQRLTVLLIPHGFDKSFHFQISVFTIFFLFSLLISILGIAVFGI
CCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
VKYNNTRKQINALSQVYGKYFDEYIEYSEQLEGVQDDFLALTENLEEIYSLIDGHGDEML
HEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
KLPDESDIETIALAELKTEESADKDLMLGRSYLSEIYGYRTARVYMDKHRPLVDSVYDFL
ECCCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHH
NLRYDVMDAIPFGEPLYSYNLTSYFGTRRSPTTGYMEYHDGIDLANVPGTPIYATGNGKI
HCHHHHHHCCCCCCCHHHCCCHHHHCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCEE
HRVIYSNRGYGNHIVIQHANGYFSLFGHCTKIFVKDGQQIRKGNLIATVGSTGNVTGPHL
EEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHCCCEEEEECCCCCCCCCEE
HYEIWIGESNRTDPMEYLKVPVY
EEEEEECCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MEKEIRKRLDRVKEKGHQRLTVLLIPHGFDKSFHFQISVFTIFFLFSLLISILGIAVFGI
CCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
VKYNNTRKQINALSQVYGKYFDEYIEYSEQLEGVQDDFLALTENLEEIYSLIDGHGDEML
HEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
KLPDESDIETIALAELKTEESADKDLMLGRSYLSEIYGYRTARVYMDKHRPLVDSVYDFL
ECCCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHH
NLRYDVMDAIPFGEPLYSYNLTSYFGTRRSPTTGYMEYHDGIDLANVPGTPIYATGNGKI
HCHHHHHHCCCCCCCHHHCCCHHHHCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCEE
HRVIYSNRGYGNHIVIQHANGYFSLFGHCTKIFVKDGQQIRKGNLIATVGSTGNVTGPHL
EEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHCCCEEEEECCCCCCCCCEE
HYEIWIGESNRTDPMEYLKVPVY
EEEEEECCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]