Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is 45659099
Identifier: 45659099
GI number: 45659099
Start: 4018901
End: 4019257
Strand: Reverse
Name: 45659099
Synonym: LIC13278
Alternate gene names: NA
Gene position: 4019257-4018901 (Counterclockwise)
Preceding gene: 45659100
Following gene: 45659097
Centisome position: 93.97
GC content: 34.45
Gene sequence:
>357_bases ATGATCAGTCAGACATTTTCCAAGACTTCGCAAAATTTAGGATTGGATCGATTTATGCACATAAAGGCTGAGAATGTTCG AACCGGACAGGTTCGGGTTTTTAATGGTTCCGATTTAATTCTGGTTCCTGATTCTTCCCATGAAAAAGAAGGAACTATGT TTCTTCATGGAAGAAGAGTCGAAAATTGTCTCAATCTTAGAAAATATTCTACTTTTTTTGTAGTTGCAGATTTTGTCTCT AAAACAGGATTTCCAGATAAAATTAAATTACAAGAAATCGGACCAGATGGGTCCGTTTTTGAAGTTTCCCAGAGTAAAAT AGATTGTTACCGAGTTATGGGAATATTTTTAGAATAA
Upstream 100 bases:
>100_bases ACAGATCAAGACTTTCAGTTTGATTCTTCAAAACTAAAAATCCGAAACGAAAACGGCATTTTGAAAGGAATTTTAATATA AGCTGAAAGAAATTTTTAAA
Downstream 100 bases:
>100_bases GAATTACTTTCTGCTGGATTTGAACTCCTATAAAAATAGAATCCGTAATCAGACATTCTTTCCTAGGGGAATTCAATCAT GGTCCAAAAGAAGAAGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MISQTFSKTSQNLGLDRFMHIKAENVRTGQVRVFNGSDLILVPDSSHEKEGTMFLHGRRVENCLNLRKYSTFFVVADFVS KTGFPDKIKLQEIGPDGSVFEVSQSKIDCYRVMGIFLE
Sequences:
>Translated_118_residues MISQTFSKTSQNLGLDRFMHIKAENVRTGQVRVFNGSDLILVPDSSHEKEGTMFLHGRRVENCLNLRKYSTFFVVADFVS KTGFPDKIKLQEIGPDGSVFEVSQSKIDCYRVMGIFLE >Mature_118_residues MISQTFSKTSQNLGLDRFMHIKAENVRTGQVRVFNGSDLILVPDSSHEKEGTMFLHGRRVENCLNLRKYSTFFVVADFVS KTGFPDKIKLQEIGPDGSVFEVSQSKIDCYRVMGIFLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13411; Mature: 13411
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISQTFSKTSQNLGLDRFMHIKAENVRTGQVRVFNGSDLILVPDSSHEKEGTMFLHGRRV CCCCCCCCHHCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEECCCCCCCCEEEEECCCH ENCLNLRKYSTFFVVADFVSKTGFPDKIKLQEIGPDGSVFEVSQSKIDCYRVMGIFLE HHHHHHHHHHHHEEEEEHHHHCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEEEECC >Mature Secondary Structure MISQTFSKTSQNLGLDRFMHIKAENVRTGQVRVFNGSDLILVPDSSHEKEGTMFLHGRRV CCCCCCCCHHCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEECCCCCCCCEEEEECCCH ENCLNLRKYSTFFVVADFVSKTGFPDKIKLQEIGPDGSVFEVSQSKIDCYRVMGIFLE HHHHHHHHHHHHEEEEEHHHHCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA