Click here to switch to the map view.

The map label for this gene is 45659064

Identifier: 45659064

GI number: 45659064

Start: 3979060

End: 3979602

Strand: Reverse

Name: 45659064

Synonym: LIC13243

Alternate gene names: NA

Gene position: 3979602-3979060 (Counterclockwise)

Preceding gene: 45659065

Following gene: 45659060

Centisome position: 93.04

GC content: 35.91

Gene sequence:

>543_bases
TTGCCTGTAGAACCTACGATCGGAGATTCTCGCAATTCAAGAGGGGAAACAGAAAAACAGACCGGAACGGGATTGGATGA
AAAGGGAGAAAAAAAAATCAAAGCAGTTTTTTGCGATGGGCGCGAGGTAGAAGGTTTTTGGAAAAATCCTCCGTTTGAAT
TTAAGTTCCGACATAAAAAAAATAATATTACATATTCAAAATCCTTAAAGCTTGAAGAGATTGCCAAAATTAAAATCACA
AATTGGAAATTAAAGTCTTCTAATAGACGAAAGGAAGGAATTCCATATCGGGCCGAACCTTATCAAATCCAAATGATTTC
CTTTTCGGGTGAAATCTTTCTTAAAGAACCTTCACCGACAGGAGAGATTCAACAGATTCAATTTAACAATCAATTTGGAG
ATGCGACCTTGTTTCTGTTTTGGAACGATTTACAATACGAAAACGGACAATGGTTTTCTGGTTTAAAACCTTTTTCGGGG
GAATTTAGGTTGGATTGTCATCCTGACGTGATTCGGGAAATTCAATTTTTTACAATAAATTAA

Upstream 100 bases:

>100_bases
CAACCGGATTCTATTTCTCAGTTTGGAATGTTTTTTTACGTTTGTGTTTCTGTTTTTAAATTTCTCTGTTCATTCACAAA
AAAGTCCTAAAGAACCCACT

Downstream 100 bases:

>100_bases
ACTTTTTGAATATATTCTAAAATTTTTCTTTCAAAATACGGCTTTTGAAGTAAGTAAATATTTTTTTGAGGAATGGAGAT
TTTAAAATCTTCTTTTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MPVEPTIGDSRNSRGETEKQTGTGLDEKGEKKIKAVFCDGREVEGFWKNPPFEFKFRHKKNNITYSKSLKLEEIAKIKIT
NWKLKSSNRRKEGIPYRAEPYQIQMISFSGEIFLKEPSPTGEIQQIQFNNQFGDATLFLFWNDLQYENGQWFSGLKPFSG
EFRLDCHPDVIREIQFFTIN

Sequences:

>Translated_180_residues
MPVEPTIGDSRNSRGETEKQTGTGLDEKGEKKIKAVFCDGREVEGFWKNPPFEFKFRHKKNNITYSKSLKLEEIAKIKIT
NWKLKSSNRRKEGIPYRAEPYQIQMISFSGEIFLKEPSPTGEIQQIQFNNQFGDATLFLFWNDLQYENGQWFSGLKPFSG
EFRLDCHPDVIREIQFFTIN
>Mature_179_residues
PVEPTIGDSRNSRGETEKQTGTGLDEKGEKKIKAVFCDGREVEGFWKNPPFEFKFRHKKNNITYSKSLKLEEIAKIKITN
WKLKSSNRRKEGIPYRAEPYQIQMISFSGEIFLKEPSPTGEIQQIQFNNQFGDATLFLFWNDLQYENGQWFSGLKPFSGE
FRLDCHPDVIREIQFFTIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21040; Mature: 20909

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVEPTIGDSRNSRGETEKQTGTGLDEKGEKKIKAVFCDGREVEGFWKNPPFEFKFRHKK
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEECCCEECCEECCCCEEEEEEECC
NNITYSKSLKLEEIAKIKITNWKLKSSNRRKEGIPYRAEPYQIQMISFSGEIFLKEPSPT
CCEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCCCC
GEIQQIQFNNQFGDATLFLFWNDLQYENGQWFSGLKPFSGEFRLDCHPDVIREIQFFTIN
CCEEEEEECCCCCCEEEEEEEECEECCCCCEECCCCCCCCCEEEECCHHHHCEEEEEEEC
>Mature Secondary Structure 
PVEPTIGDSRNSRGETEKQTGTGLDEKGEKKIKAVFCDGREVEGFWKNPPFEFKFRHKK
CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEECCCEECCEECCCCEEEEEEECC
NNITYSKSLKLEEIAKIKITNWKLKSSNRRKEGIPYRAEPYQIQMISFSGEIFLKEPSPT
CCEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCCCC
GEIQQIQFNNQFGDATLFLFWNDLQYENGQWFSGLKPFSGEFRLDCHPDVIREIQFFTIN
CCEEEEEECCCCCCEEEEEEEECEECCCCCEECCCCCCCCCEEEECCHHHHCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA