Click here to switch to the map view.

The map label for this gene is 45659058

Identifier: 45659058

GI number: 45659058

Start: 3973786

End: 3974343

Strand: Reverse

Name: 45659058

Synonym: LIC13237

Alternate gene names: NA

Gene position: 3974343-3973786 (Counterclockwise)

Preceding gene: 45659060

Following gene: 45659054

Centisome position: 92.92

GC content: 39.25

Gene sequence:

>558_bases
ATGGATTTAACCAAATTGGCGGTTTGTGTTTTTTGTGGTTCGCGTTCCGGGAACAATCCGGTTTATGTGGAAGCGGCTCG
GAATTTGGGTCGATTGCTCGTTGAAAAAAATTTAGATTTGGTTTTTGGAGGGGCTTCGTGCGGTATCATGGGAACGATTG
CTGATGCTGTAATGGACAAAGGAGGAGGTGTATCTGGAATCATTCCGGATTTTCTTTCTATCAAAGAAGTTAAACACGAT
CGTGTTAAGGATTTGATGATCGTTTCTTCCATGCATGAAAGAAAATTTAGGATGTATGAAAGGTCCTCAGGTTTTATCGC
CTTGCCTGGTGGAATTGGAACTTTGGACGAGCTCGTAGAAATCACTACTTGGAATCAACTCAAACTTATTTCAAAACCTT
TGGGTTTACTCAATGTAAACGGTTATTTTGAATATTTGCTTAAACAATTAGGTAGAATGGTGGACGATGGTTTTTTAGAT
TCGGAAACTAAAGAAGGTCTAATCGTTTCGGAAGATCCGGAAGAATTACTCGACTTATTGAGTAGACGTTTTGTTTAA

Upstream 100 bases:

>100_bases
TTTCAAACAAGAAAAATGTTACAAAATTCTATTTATTGTAAATAACGATGGAATGATTTTATTCCGATCTTATTAAATAG
AAGTAAATAAAAGAGAGATT

Downstream 100 bases:

>100_bases
AGTTTATTTCTAATATTCAAATTTTATGTTATATATTTTTAATTTGCTTAAAGCATTAAAAAAGATAAGTCTAACGTGAG
CTCTATGTAAGAAAATCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MDLTKLAVCVFCGSRSGNNPVYVEAARNLGRLLVEKNLDLVFGGASCGIMGTIADAVMDKGGGVSGIIPDFLSIKEVKHD
RVKDLMIVSSMHERKFRMYERSSGFIALPGGIGTLDELVEITTWNQLKLISKPLGLLNVNGYFEYLLKQLGRMVDDGFLD
SETKEGLIVSEDPEELLDLLSRRFV

Sequences:

>Translated_185_residues
MDLTKLAVCVFCGSRSGNNPVYVEAARNLGRLLVEKNLDLVFGGASCGIMGTIADAVMDKGGGVSGIIPDFLSIKEVKHD
RVKDLMIVSSMHERKFRMYERSSGFIALPGGIGTLDELVEITTWNQLKLISKPLGLLNVNGYFEYLLKQLGRMVDDGFLD
SETKEGLIVSEDPEELLDLLSRRFV
>Mature_185_residues
MDLTKLAVCVFCGSRSGNNPVYVEAARNLGRLLVEKNLDLVFGGASCGIMGTIADAVMDKGGGVSGIIPDFLSIKEVKHD
RVKDLMIVSSMHERKFRMYERSSGFIALPGGIGTLDELVEITTWNQLKLISKPLGLLNVNGYFEYLLKQLGRMVDDGFLD
SETKEGLIVSEDPEELLDLLSRRFV

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=205, Percent_Identity=34.1463414634146, Blast_Score=122, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 20374; Mature: 20374

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLTKLAVCVFCGSRSGNNPVYVEAARNLGRLLVEKNLDLVFGGASCGIMGTIADAVMDK
CCHHHHHHHHEECCCCCCCCEEEHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHC
GGGVSGIIPDFLSIKEVKHDRVKDLMIVSSMHERKFRMYERSSGFIALPGGIGTLDELVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHH
ITTWNQLKLISKPLGLLNVNGYFEYLLKQLGRMVDDGFLDSETKEGLIVSEDPEELLDLL
HCCCCHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHH
SRRFV
HHCCC
>Mature Secondary Structure
MDLTKLAVCVFCGSRSGNNPVYVEAARNLGRLLVEKNLDLVFGGASCGIMGTIADAVMDK
CCHHHHHHHHEECCCCCCCCEEEHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHC
GGGVSGIIPDFLSIKEVKHDRVKDLMIVSSMHERKFRMYERSSGFIALPGGIGTLDELVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHH
ITTWNQLKLISKPLGLLNVNGYFEYLLKQLGRMVDDGFLDSETKEGLIVSEDPEELLDLL
HCCCCHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHH
SRRFV
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]