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The map label for this gene is yadH [H]

Identifier: 45658519

GI number: 45658519

Start: 3252976

End: 3253737

Strand: Reverse

Name: yadH [H]

Synonym: LIC12683

Alternate gene names: 45658519

Gene position: 3253737-3252976 (Counterclockwise)

Preceding gene: 45658520

Following gene: 45658518

Centisome position: 76.07

GC content: 34.65

Gene sequence:

>762_bases
ATGAATCTATACGCGATCAAATCCATTTATATTTTTGAAATGTCCAGAACGTGGAGAACACTTTTTCAAAGTATTGCTTC
TCCCGTTATTTCTACTTCCTTGTACTTCGTTGTTTTCGGTTCTGCAATTGGTTCTAGAATCCAAGAAGTGGATGGAGTAG
GTTATGGTTCGTTTATCGTTCCTGGTTTAATTATGTTGTCTTTATTGACAGAGAGTATTTCTAATTCTTCTTTTGGAATT
TATTTTCCTAAGTTTACAGGGACAATTTATGAAATTTTAGCGGCGCCGATTTCTATGATAGAGATAGTAATTGGTTTTGT
GGGCGCTGCGGCTACAAAATCAGTGATCTTGGGAACGATTATGCTTGCCACTGCTTCTTTATTTGTTCCGATTAAAATTG
CACATCCGTTTGTGATGATTCTTTTTCTTCTTTTAACTTCAATTTCTTTTAGTTTGTTCGGATTTATCATAGGGATTTGG
GCGGATAGTTTCGAAAAATTGCAAGTGATTCCTTTACTCATCATAACTCCTTTAGTATTTTTAGGTGGAAGTTTTTATTC
TGCGAATATGCTTCCTCCTTTTTGGCAAAAGGTAACTTTTTTTAATCCGGTTCTTTATTTAGTGAGCGGATTTCGTTGGA
GTTTTTACGAGATTTCTGACGTAAGCGTGGGAGTAAGTCTTACGATGGTTTTTGTTTTTCTTTCGATTTGTTTGTGTCTG
GTTTGGATGATTTTTAAAACCGGTTACAAAATTAAAAAATAA

Upstream 100 bases:

>100_bases
CCACTCTTCTTCAAGATTTAAAAAAAGCTAAAATTGATTTCAAAGATTTAAATACTACTCAAAGTTCTTTGGAAGAAATA
TTCGTTCAGTTGGTATCAAA

Downstream 100 bases:

>100_bases
ATTTTGAATATGAAATCAAATCATTTGAGATTTGAAGGTAGAAACGTTTTTATTATTGGCGGTTCGGCTGGAATTGGAAA
AGGACTTGCACTGGAGTTTG

Product: ABC transporter membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNLYAIKSIYIFEMSRTWRTLFQSIASPVISTSLYFVVFGSAIGSRIQEVDGVGYGSFIVPGLIMLSLLTESISNSSFGI
YFPKFTGTIYEILAAPISMIEIVIGFVGAAATKSVILGTIMLATASLFVPIKIAHPFVMILFLLLTSISFSLFGFIIGIW
ADSFEKLQVIPLLIITPLVFLGGSFYSANMLPPFWQKVTFFNPVLYLVSGFRWSFYEISDVSVGVSLTMVFVFLSICLCL
VWMIFKTGYKIKK

Sequences:

>Translated_253_residues
MNLYAIKSIYIFEMSRTWRTLFQSIASPVISTSLYFVVFGSAIGSRIQEVDGVGYGSFIVPGLIMLSLLTESISNSSFGI
YFPKFTGTIYEILAAPISMIEIVIGFVGAAATKSVILGTIMLATASLFVPIKIAHPFVMILFLLLTSISFSLFGFIIGIW
ADSFEKLQVIPLLIITPLVFLGGSFYSANMLPPFWQKVTFFNPVLYLVSGFRWSFYEISDVSVGVSLTMVFVFLSICLCL
VWMIFKTGYKIKK
>Mature_253_residues
MNLYAIKSIYIFEMSRTWRTLFQSIASPVISTSLYFVVFGSAIGSRIQEVDGVGYGSFIVPGLIMLSLLTESISNSSFGI
YFPKFTGTIYEILAAPISMIEIVIGFVGAAATKSVILGTIMLATASLFVPIKIAHPFVMILFLLLTSISFSLFGFIIGIW
ADSFEKLQVIPLLIITPLVFLGGSFYSANMLPPFWQKVTFFNPVLYLVSGFRWSFYEISDVSVGVSLTMVFVFLSICLCL
VWMIFKTGYKIKK

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=255, Percent_Identity=37.2549019607843, Blast_Score=187, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28100; Mature: 28100

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLYAIKSIYIFEMSRTWRTLFQSIASPVISTSLYFVVFGSAIGSRIQEVDGVGYGSFIV
CCCEEEEHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
PGLIMLSLLTESISNSSFGIYFPKFTGTIYEILAAPISMIEIVIGFVGAAATKSVILGTI
HHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLATASLFVPIKIAHPFVMILFLLLTSISFSLFGFIIGIWADSFEKLQVIPLLIITPLVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LGGSFYSANMLPPFWQKVTFFNPVLYLVSGFRWSFYEISDVSVGVSLTMVFVFLSICLCL
HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
VWMIFKTGYKIKK
HHHHHHCCCCCCC
>Mature Secondary Structure
MNLYAIKSIYIFEMSRTWRTLFQSIASPVISTSLYFVVFGSAIGSRIQEVDGVGYGSFIV
CCCEEEEHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
PGLIMLSLLTESISNSSFGIYFPKFTGTIYEILAAPISMIEIVIGFVGAAATKSVILGTI
HHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLATASLFVPIKIAHPFVMILFLLLTSISFSLFGFIIGIWADSFEKLQVIPLLIITPLVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LGGSFYSANMLPPFWQKVTFFNPVLYLVSGFRWSFYEISDVSVGVSLTMVFVFLSICLCL
HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
VWMIFKTGYKIKK
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]