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The map label for this gene is 45658516

Identifier: 45658516

GI number: 45658516

Start: 3248599

End: 3250026

Strand: Reverse

Name: 45658516

Synonym: LIC12680

Alternate gene names: NA

Gene position: 3250026-3248599 (Counterclockwise)

Preceding gene: 45658518

Following gene: 45658509

Centisome position: 75.99

GC content: 40.27

Gene sequence:

>1428_bases
ATGAATCGGCGTCTCTGCTTATCTTTGATGTTCGCAGTAACATCGTTCTTTGTATATTGTTCTCAAGCCGATCGGATCAG
TATAGACTCTTCTTCAGCGGCTGGTCTTCTTTTTCAAGGTAGTATGGAGGCCTTGTTAACGGAAAATCAAAACCAGAACG
ATTCTCCAGTTATTTCCGGAGAACCAAAGGAAATTACTTCTTTTAGTTTTCAAGCCACAGATCATTTTTTTGTCACCGAT
TTTGTAGGAGAAGTCTCCGAAAATAGAATTGCGATTTTGGTTCCATTTGGGGCGGTGTCTCGTTTAAAAGCTACTTTCGT
AACCACGGGAGTAAGAGTAGAGGTAAACGGTGTTCCTCAATCCAGTGGACAGACAATAAATGATTTCTCTTCTCCGTTGA
TTTATAGAGTAATTGCAAGTGATGAAAGTTTTCGAGATTATACGGTTCAAGCTCTTCCTATATTTCGTCTAACGGATTCG
GGACAGACTAGTTGTTATTCATCTTGTTTTGATGATCCTGGTCAGGATGCGGATTATTCTACGGGGGTTCCTGCCAATTT
TCAATCCAATGTAATTATGCCAGGTTATACTCCACAGCCTGTGACTTTTGATCGGCAAACTGGTTTGATTTGGAGATATT
GCCCTGTTGGTGGAAGTAGCACTGTTTGTTCCATGCCTTATAATTATACTCAATCATTTGCAGTTTCTTATTGTACCAAT
CTAAATCAGATGAATGCGGGGCTGGGATATGCTGGTATTCAAGGTTGGAGACTTCCTGAAATTGAAGAGTTGATGACTCT
CAGTACTTATAAAACTCCCACCGCAGCGTATATCAATTTAAGTGAGTTTCCTCTAGGAGATGTACAACTTTGGTCAAATA
CAACAAACGCATTCAATACGAACGAAGCTTGGGGATTTCGTTTTGATTTTGGACTTAACACTTCTACGGATAAGTCGGTT
TCTTCAAATATGAATGTTCGTTGTGTTTCTGGTGGTAGAATGCCTGATCAAATTTACTCCGATTTAAATAATGGAGCGGT
TCGAGACGATAGAACCAATTTAGTTTGGCAGAAGTGTTCCGTTGGACAGATCTGGTCGCCTAATTCTCCCGATTGTACTT
TAGGAAGTGCGACTATTCATAATTTTGTTTCGGCTTTATATACATGCCAAAGTTTGAATTTAGCGGATCGTGCTTGGAGG
CTTCCTAACGTTCACGAGTTGAGGAGTTTATTGGATTTTTCTTCTTCTTCGACAGGCGCGAAAATTGATCCGGTTGCTTT
TCCGAATACTCCAGCCGTATCACAATATATTACGAGCAATTCCATTCCACATGCACAAGTGTTTAAAGTTAACTTTAAAG
ATGCTACAATCAGCACCACCACTTTGAGCACCCAAACTTATTTACGCTGTGTCAGTGATGGTCCTTGA

Upstream 100 bases:

>100_bases
CTTATAGATTCGAATTCTTTCATTGATTAGCTTATAACTTGATAGGATTTATTTTGGAATACCAATTATAGTTTTCTTAT
TAAAGGAAAATGATCTTTTT

Downstream 100 bases:

>100_bases
GTAATTTTTCCGGTTAAAATTTCATTATTTATTTGTGAGTGCGTTGGATAAACCTCCAGAAAAATTTCCGATAGATTTAA
ACTTGGTCGGAACCGTTATT

Product: FimH-like protein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MNRRLCLSLMFAVTSFFVYCSQADRISIDSSSAAGLLFQGSMEALLTENQNQNDSPVISGEPKEITSFSFQATDHFFVTD
FVGEVSENRIAILVPFGAVSRLKATFVTTGVRVEVNGVPQSSGQTINDFSSPLIYRVIASDESFRDYTVQALPIFRLTDS
GQTSCYSSCFDDPGQDADYSTGVPANFQSNVIMPGYTPQPVTFDRQTGLIWRYCPVGGSSTVCSMPYNYTQSFAVSYCTN
LNQMNAGLGYAGIQGWRLPEIEELMTLSTYKTPTAAYINLSEFPLGDVQLWSNTTNAFNTNEAWGFRFDFGLNTSTDKSV
SSNMNVRCVSGGRMPDQIYSDLNNGAVRDDRTNLVWQKCSVGQIWSPNSPDCTLGSATIHNFVSALYTCQSLNLADRAWR
LPNVHELRSLLDFSSSSTGAKIDPVAFPNTPAVSQYITSNSIPHAQVFKVNFKDATISTTTLSTQTYLRCVSDGP

Sequences:

>Translated_475_residues
MNRRLCLSLMFAVTSFFVYCSQADRISIDSSSAAGLLFQGSMEALLTENQNQNDSPVISGEPKEITSFSFQATDHFFVTD
FVGEVSENRIAILVPFGAVSRLKATFVTTGVRVEVNGVPQSSGQTINDFSSPLIYRVIASDESFRDYTVQALPIFRLTDS
GQTSCYSSCFDDPGQDADYSTGVPANFQSNVIMPGYTPQPVTFDRQTGLIWRYCPVGGSSTVCSMPYNYTQSFAVSYCTN
LNQMNAGLGYAGIQGWRLPEIEELMTLSTYKTPTAAYINLSEFPLGDVQLWSNTTNAFNTNEAWGFRFDFGLNTSTDKSV
SSNMNVRCVSGGRMPDQIYSDLNNGAVRDDRTNLVWQKCSVGQIWSPNSPDCTLGSATIHNFVSALYTCQSLNLADRAWR
LPNVHELRSLLDFSSSSTGAKIDPVAFPNTPAVSQYITSNSIPHAQVFKVNFKDATISTTTLSTQTYLRCVSDGP
>Mature_475_residues
MNRRLCLSLMFAVTSFFVYCSQADRISIDSSSAAGLLFQGSMEALLTENQNQNDSPVISGEPKEITSFSFQATDHFFVTD
FVGEVSENRIAILVPFGAVSRLKATFVTTGVRVEVNGVPQSSGQTINDFSSPLIYRVIASDESFRDYTVQALPIFRLTDS
GQTSCYSSCFDDPGQDADYSTGVPANFQSNVIMPGYTPQPVTFDRQTGLIWRYCPVGGSSTVCSMPYNYTQSFAVSYCTN
LNQMNAGLGYAGIQGWRLPEIEELMTLSTYKTPTAAYINLSEFPLGDVQLWSNTTNAFNTNEAWGFRFDFGLNTSTDKSV
SSNMNVRCVSGGRMPDQIYSDLNNGAVRDDRTNLVWQKCSVGQIWSPNSPDCTLGSATIHNFVSALYTCQSLNLADRAWR
LPNVHELRSLLDFSSSSTGAKIDPVAFPNTPAVSQYITSNSIPHAQVFKVNFKDATISTTTLSTQTYLRCVSDGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52147; Mature: 52147

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRLCLSLMFAVTSFFVYCSQADRISIDSSSAAGLLFQGSMEALLTENQNQNDSPVISG
CCCHHHHHHHHHHHHHHHEECCCCEEEECCCCCCEEEEECCHHHHHCCCCCCCCCCEECC
EPKEITSFSFQATDHFFVTDFVGEVSENRIAILVPFGAVSRLKATFVTTGVRVEVNGVPQ
CCCHHEEEEEECCCCEEEEHHHHHCCCCEEEEEECCCCHHHHEEEEEEECEEEEECCCCC
SSGQTINDFSSPLIYRVIASDESFRDYTVQALPIFRLTDSGQTSCYSSCFDDPGQDADYS
CCCCCHHHCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCC
TGVPANFQSNVIMPGYTPQPVTFDRQTGLIWRYCPVGGSSTVCSMPYNYTQSFAVSYCTN
CCCCCCCCCCEEECCCCCCCEEEECCCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHCC
LNQMNAGLGYAGIQGWRLPEIEELMTLSTYKTPTAAYINLSEFPLGDVQLWSNTTNAFNT
CHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCCCCCC
NEAWGFRFDFGLNTSTDKSVSSNMNVRCVSGGRMPDQIYSDLNNGAVRDDRTNLVWQKCS
CCCCEEEEECCCCCCCCCHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEECC
VGQIWSPNSPDCTLGSATIHNFVSALYTCQSLNLADRAWRLPNVHELRSLLDFSSSSTGA
CCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCCCCCCCC
KIDPVAFPNTPAVSQYITSNSIPHAQVFKVNFKDATISTTTLSTQTYLRCVSDGP
EECCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECHHHHHEEECCCC
>Mature Secondary Structure
MNRRLCLSLMFAVTSFFVYCSQADRISIDSSSAAGLLFQGSMEALLTENQNQNDSPVISG
CCCHHHHHHHHHHHHHHHEECCCCEEEECCCCCCEEEEECCHHHHHCCCCCCCCCCEECC
EPKEITSFSFQATDHFFVTDFVGEVSENRIAILVPFGAVSRLKATFVTTGVRVEVNGVPQ
CCCHHEEEEEECCCCEEEEHHHHHCCCCEEEEEECCCCHHHHEEEEEEECEEEEECCCCC
SSGQTINDFSSPLIYRVIASDESFRDYTVQALPIFRLTDSGQTSCYSSCFDDPGQDADYS
CCCCCHHHCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCC
TGVPANFQSNVIMPGYTPQPVTFDRQTGLIWRYCPVGGSSTVCSMPYNYTQSFAVSYCTN
CCCCCCCCCCEEECCCCCCCEEEECCCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHCC
LNQMNAGLGYAGIQGWRLPEIEELMTLSTYKTPTAAYINLSEFPLGDVQLWSNTTNAFNT
CHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCCCCCC
NEAWGFRFDFGLNTSTDKSVSSNMNVRCVSGGRMPDQIYSDLNNGAVRDDRTNLVWQKCS
CCCCEEEEECCCCCCCCCHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEECC
VGQIWSPNSPDCTLGSATIHNFVSALYTCQSLNLADRAWRLPNVHELRSLLDFSSSSTGA
CCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCCCCCCCC
KIDPVAFPNTPAVSQYITSNSIPHAQVFKVNFKDATISTTTLSTQTYLRCVSDGP
EECCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA