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The map label for this gene is 45658437

Identifier: 45658437

GI number: 45658437

Start: 3152254

End: 3152985

Strand: Reverse

Name: 45658437

Synonym: LIC12600

Alternate gene names: NA

Gene position: 3152985-3152254 (Counterclockwise)

Preceding gene: 45658438

Following gene: 45658426

Centisome position: 73.72

GC content: 34.43

Gene sequence:

>732_bases
ATGAATTATATATTAGAAAAATTGAATAAACAAGTAATTTGGATCAACACAGACCCAAATCGATTAGTTGGAGAAAAAGC
CTGGGGGAACTTTAAACCTAATCAACACGAAATCGTATATTCTCTTCACTACAATCCAGAAATTAGAGAAACGTTTGTTG
CGGAAATTAAAGACGGAGTGGCGCAAGATTTTACGCTGCAAAAAGTGTACAACAAAATTTCGGGAGAGGAGAGAATCCTA
CAGAGCTGGGAAGATAAAATAGATTCGGAAATAGAAACGGAGATAGAACCTTTCAAGGACTCTGCCGGAAATCTGGTGGA
GTATCAAAAATATACGGATTCCGGTTGGATGATCGATCAAGAACGCAAAAAAGAATCTTTGTTAGAGAAAAATAGCCAGA
CCTTTTATTCCAAACTTGACTCTTATAGAAGTAAGGTTGTTTATCGTAATACACTTTGGGATTCCGGTAAAACTTATTTA
GAGAATATTCAAAAAACATTAACTCTTTATAACAAACAACGGATTATCTCCATCCCGGAATGGAGAGATGCAAATGACCA
ATTTCATTCTTTGAGTGTAGAAGAATTATCGGAATTATTGGATTTAATCGAGTTAGATCTTTTTAACGCAGGCAGAATTT
TATATACTAAAAAATGGGAAATGGAAGAAAAAATTCGACATTTAGCTCCACAAGAATTTTTGGATTTGTCTATAGAATGG
AACTTGAGTTGA

Upstream 100 bases:

>100_bases
TTCGTTCAGTAATCTCTGACGGTTCTAATGGGACCCCAAGGGCTGGTGATGAGAATACTCCTGCATATATAGCGGTAAAA
TACAAAGTGAGGGTAGCATA

Downstream 100 bases:

>100_bases
GAATTATATAGAAACTTATATTTGTTGTAAGGGATGGTATTTCGGATTAAACGAGAATCTTTTTCCGATTTGTGTCTTGT
GAATGGCTCTTTGAACTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNYILEKLNKQVIWINTDPNRLVGEKAWGNFKPNQHEIVYSLHYNPEIRETFVAEIKDGVAQDFTLQKVYNKISGEERIL
QSWEDKIDSEIETEIEPFKDSAGNLVEYQKYTDSGWMIDQERKKESLLEKNSQTFYSKLDSYRSKVVYRNTLWDSGKTYL
ENIQKTLTLYNKQRIISIPEWRDANDQFHSLSVEELSELLDLIELDLFNAGRILYTKKWEMEEKIRHLAPQEFLDLSIEW
NLS

Sequences:

>Translated_243_residues
MNYILEKLNKQVIWINTDPNRLVGEKAWGNFKPNQHEIVYSLHYNPEIRETFVAEIKDGVAQDFTLQKVYNKISGEERIL
QSWEDKIDSEIETEIEPFKDSAGNLVEYQKYTDSGWMIDQERKKESLLEKNSQTFYSKLDSYRSKVVYRNTLWDSGKTYL
ENIQKTLTLYNKQRIISIPEWRDANDQFHSLSVEELSELLDLIELDLFNAGRILYTKKWEMEEKIRHLAPQEFLDLSIEW
NLS
>Mature_243_residues
MNYILEKLNKQVIWINTDPNRLVGEKAWGNFKPNQHEIVYSLHYNPEIRETFVAEIKDGVAQDFTLQKVYNKISGEERIL
QSWEDKIDSEIETEIEPFKDSAGNLVEYQKYTDSGWMIDQERKKESLLEKNSQTFYSKLDSYRSKVVYRNTLWDSGKTYL
ENIQKTLTLYNKQRIISIPEWRDANDQFHSLSVEELSELLDLIELDLFNAGRILYTKKWEMEEKIRHLAPQEFLDLSIEW
NLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28957; Mature: 28957

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYILEKLNKQVIWINTDPNRLVGEKAWGNFKPNQHEIVYSLHYNPEIRETFVAEIKDGV
CCHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
AQDFTLQKVYNKISGEERILQSWEDKIDSEIETEIEPFKDSAGNLVEYQKYTDSGWMIDQ
HCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEHEECCCCCEECH
ERKKESLLEKNSQTFYSKLDSYRSKVVYRNTLWDSGKTYLENIQKTLTLYNKQRIISIPE
HHHHHHHHHCCHHHHHHHHHHHHHHEEHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCC
WRDANDQFHSLSVEELSELLDLIELDLFNAGRILYTKKWEMEEKIRHLAPQEFLDLSIEW
CCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCHHHHEEEEEE
NLS
CCC
>Mature Secondary Structure
MNYILEKLNKQVIWINTDPNRLVGEKAWGNFKPNQHEIVYSLHYNPEIRETFVAEIKDGV
CCHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
AQDFTLQKVYNKISGEERILQSWEDKIDSEIETEIEPFKDSAGNLVEYQKYTDSGWMIDQ
HCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEHEECCCCCEECH
ERKKESLLEKNSQTFYSKLDSYRSKVVYRNTLWDSGKTYLENIQKTLTLYNKQRIISIPE
HHHHHHHHHCCHHHHHHHHHHHHHHEEHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCC
WRDANDQFHSLSVEELSELLDLIELDLFNAGRILYTKKWEMEEKIRHLAPQEFLDLSIEW
CCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCHHHHEEEEEE
NLS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA