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The map label for this gene is 45658425

Identifier: 45658425

GI number: 45658425

Start: 3133591

End: 3134241

Strand: Reverse

Name: 45658425

Synonym: LIC12587

Alternate gene names: NA

Gene position: 3134241-3133591 (Counterclockwise)

Preceding gene: 45658426

Following gene: 45658424

Centisome position: 73.28

GC content: 34.41

Gene sequence:

>651_bases
ATGACATTCAATACAACAATCATTACTGTAATAACCTTGTTTCTATTTATATCTGGTTGTACTAGCAGTCAGAAAACAGT
GGATTCCGGACTTTCTCAGGAATTAGTGATCCGTTCTAAAATTCAATCGATTGATTCTCAACTTTCCTCTTCGCAATTAG
ATGAAAAAAAACGTTCTTCTTTGTTGATGGAAAAGGCAAAGTTATTGATTCAAATTGAATCTTATAAAGAAGCAACGGTT
GTCTTAAAAGAGATTCAAAATTCTAAAGAAGGCAAAAGTCTAGAACATCTAGATCATTATTTGGGAACGGCTTATTTAGG
AATCAATGATACTGAAAACGCGATCGTTCATTTTAGAAAGTCCGAGTCCGTAGATAAAAACTATGAATCTACAAATCGTA
AAAAGATGTATGCGAAAGCACTCTATCAAGAAGAAAAATACGGCTTGGCTCTGGGCATTTTAGGTCGTGCTTCTAGAGAA
AAAGATTTTGAAAAAGATATTCTATTTTATGAAACCGTCGCAAATAGTTTTATGCGAATTAAGGAATTCAAAAGATGTCA
GATGGTTCTGGAAGAAGGGCTTCAGAAATTTCCGGAAAGTCCGGTTCTGAAAGAAATCCAAGAGCAACTTTCTCAGGTTC
TTCCAAGATAA

Upstream 100 bases:

>100_bases
ATCCGGAGACTATGGACTGGGTTTCCAATGATGAGGTTCGACAGCAAGAGACAGAAGATTTTTTTGCCGAACTGGAAAAA
TTGAAAACAGGATCGTAAGT

Downstream 100 bases:

>100_bases
TTCAGCACAATTCTAAATTGGCCCGGGTTCGGAAAAAATTCGTTCCCGGTGATCTCATCCGTTATCTCGGGTCTTTTTTA
TTTTTTTTAAAAGAAAACCG

Product: putative lipoprotein

Products: NA

Alternate protein names: TPR Repeat-Containing Lipoprotein

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTFNTTIITVITLFLFISGCTSSQKTVDSGLSQELVIRSKIQSIDSQLSSSQLDEKKRSSLLMEKAKLLIQIESYKEATV
VLKEIQNSKEGKSLEHLDHYLGTAYLGINDTENAIVHFRKSESVDKNYESTNRKKMYAKALYQEEKYGLALGILGRASRE
KDFEKDILFYETVANSFMRIKEFKRCQMVLEEGLQKFPESPVLKEIQEQLSQVLPR

Sequences:

>Translated_216_residues
MTFNTTIITVITLFLFISGCTSSQKTVDSGLSQELVIRSKIQSIDSQLSSSQLDEKKRSSLLMEKAKLLIQIESYKEATV
VLKEIQNSKEGKSLEHLDHYLGTAYLGINDTENAIVHFRKSESVDKNYESTNRKKMYAKALYQEEKYGLALGILGRASRE
KDFEKDILFYETVANSFMRIKEFKRCQMVLEEGLQKFPESPVLKEIQEQLSQVLPR
>Mature_215_residues
TFNTTIITVITLFLFISGCTSSQKTVDSGLSQELVIRSKIQSIDSQLSSSQLDEKKRSSLLMEKAKLLIQIESYKEATVV
LKEIQNSKEGKSLEHLDHYLGTAYLGINDTENAIVHFRKSESVDKNYESTNRKKMYAKALYQEEKYGLALGILGRASREK
DFEKDILFYETVANSFMRIKEFKRCQMVLEEGLQKFPESPVLKEIQEQLSQVLPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24764; Mature: 24633

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFNTTIITVITLFLFISGCTSSQKTVDSGLSQELVIRSKIQSIDSQLSSSQLDEKKRSS
CCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMEKAKLLIQIESYKEATVVLKEIQNSKEGKSLEHLDHYLGTAYLGINDTENAIVHFRK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCHHHEEECC
SESVDKNYESTNRKKMYAKALYQEEKYGLALGILGRASREKDFEKDILFYETVANSFMRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
KEFKRCQMVLEEGLQKFPESPVLKEIQEQLSQVLPR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFNTTIITVITLFLFISGCTSSQKTVDSGLSQELVIRSKIQSIDSQLSSSQLDEKKRSS
CCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMEKAKLLIQIESYKEATVVLKEIQNSKEGKSLEHLDHYLGTAYLGINDTENAIVHFRK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCHHHEEECC
SESVDKNYESTNRKKMYAKALYQEEKYGLALGILGRASREKDFEKDILFYETVANSFMRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
KEFKRCQMVLEEGLQKFPESPVLKEIQEQLSQVLPR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA