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The map label for this gene is 45657828

Identifier: 45657828

GI number: 45657828

Start: 2379952

End: 2381034

Strand: Reverse

Name: 45657828

Synonym: LIC11975

Alternate gene names: NA

Gene position: 2381034-2379952 (Counterclockwise)

Preceding gene: 45657829

Following gene: 45657813

Centisome position: 55.67

GC content: 41.55

Gene sequence:

>1083_bases
ATGATGAATACCTTCCGCAGTTTAGTGGTAGGAAAGTTTTTTCCTATTTTAGTTTTTTCTTTCATTGGATTTTTGACCCC
GGCTAATTCGCTGATTGCACAAATCGAATGTAGCGGTGCGGCCTGTACGGTCATTCCGAGTAATATTTCCTCTCAGTTTA
ACGGACTGGAATACGAGATTCATACAAAATATCTAAATGAAGTAGTCGACTCGATGGAAGACGCCGCTTTATTGACTACG
ATCAATTCTTCTATGATGGGTAACGGATCGATCAATCGATTTCAAGTCGGAGCAGGACTTTCCGCGGCGGGAGTTAAGAA
TGACGATATACAGATTCAATACGGTGGAATTACTCTTCCGAATTTACCAAACGGAGGAGCTTCTCTTGCTCCTACGTTGA
TGGCCGGAGTCAATTTAGGTTGGTTGACTGGAAATGGACCCGCTGATCAGAAAGATAAGGATGAAAAAGATGACGGAGGA
AGATCTTTTCTTCATAGAATCAATATTTTTGCTCACGGTTTTCAAGGAAAATTGGATCAAGGAGACTTGAAAGAGCTCAA
TGATCAATCAGATCAATATAAATTTTCGGGTAATTACAATTCCTTTGGAGCTACAGTTCGTTTTCAATTGATTCGAGAAC
GTTATACGCGTTTGGATTTTTTTGGTTTTACCGGTCTTAGTTTGGGGCTCGGATTTCATCGTAAGACTGAAGAAATGAAT
TTAGGTTATTCTCCGACACAAATACCTAAAATTTCATTTGGACCTGCTACAGGACGTTGGGATGCCGATTTCGCTTTGGA
TTATAGATCTAGGTCTCAGTCTTTGCCGATTGATATTCGAACCGGGGTGCGCTTGTTTTATTTTCTTACGATTTTTGTCG
GAGCGGGAATGAGTCAAAATTCTGGAAATTCCAATATCCATTTAGGTGTGACCGGCCCGATGGTGCTTACTCTAGATGCG
GCAGCCGCGGGTTTACCTATAGATTTTTTAAAAGGGCAGGCGGCCAGTTCGACGGGAAATCTTGCCATTCGAAGTCATGG
AGACGCAAAAGCTAAGGATAGTGTGAATTATCTTTTGGGATGA

Upstream 100 bases:

>100_bases
AATCTATGCGGGAACTACGGAAATTATGAAAGAGATCATAGGCAGAAGCCTGGGACTCTGAAATAAATTTCTAATGGTTC
CCGTCGAATGAAACGGGGTA

Downstream 100 bases:

>100_bases
GTCGAAATCAATCTACTCACCTTTAAAATTTTAGTAGAAGGGGTGGTTTCCGACAAGATTTATTCTGCGAATGTAGGAGT
TAAGTTTGCTCTTTGATAAA

Product: outer membrane protein

Products: NA

Alternate protein names: Outermembrane Protein

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MMNTFRSLVVGKFFPILVFSFIGFLTPANSLIAQIECSGAACTVIPSNISSQFNGLEYEIHTKYLNEVVDSMEDAALLTT
INSSMMGNGSINRFQVGAGLSAAGVKNDDIQIQYGGITLPNLPNGGASLAPTLMAGVNLGWLTGNGPADQKDKDEKDDGG
RSFLHRINIFAHGFQGKLDQGDLKELNDQSDQYKFSGNYNSFGATVRFQLIRERYTRLDFFGFTGLSLGLGFHRKTEEMN
LGYSPTQIPKISFGPATGRWDADFALDYRSRSQSLPIDIRTGVRLFYFLTIFVGAGMSQNSGNSNIHLGVTGPMVLTLDA
AAAGLPIDFLKGQAASSTGNLAIRSHGDAKAKDSVNYLLG

Sequences:

>Translated_360_residues
MMNTFRSLVVGKFFPILVFSFIGFLTPANSLIAQIECSGAACTVIPSNISSQFNGLEYEIHTKYLNEVVDSMEDAALLTT
INSSMMGNGSINRFQVGAGLSAAGVKNDDIQIQYGGITLPNLPNGGASLAPTLMAGVNLGWLTGNGPADQKDKDEKDDGG
RSFLHRINIFAHGFQGKLDQGDLKELNDQSDQYKFSGNYNSFGATVRFQLIRERYTRLDFFGFTGLSLGLGFHRKTEEMN
LGYSPTQIPKISFGPATGRWDADFALDYRSRSQSLPIDIRTGVRLFYFLTIFVGAGMSQNSGNSNIHLGVTGPMVLTLDA
AAAGLPIDFLKGQAASSTGNLAIRSHGDAKAKDSVNYLLG
>Mature_360_residues
MMNTFRSLVVGKFFPILVFSFIGFLTPANSLIAQIECSGAACTVIPSNISSQFNGLEYEIHTKYLNEVVDSMEDAALLTT
INSSMMGNGSINRFQVGAGLSAAGVKNDDIQIQYGGITLPNLPNGGASLAPTLMAGVNLGWLTGNGPADQKDKDEKDDGG
RSFLHRINIFAHGFQGKLDQGDLKELNDQSDQYKFSGNYNSFGATVRFQLIRERYTRLDFFGFTGLSLGLGFHRKTEEMN
LGYSPTQIPKISFGPATGRWDADFALDYRSRSQSLPIDIRTGVRLFYFLTIFVGAGMSQNSGNSNIHLGVTGPMVLTLDA
AAAGLPIDFLKGQAASSTGNLAIRSHGDAKAKDSVNYLLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38831; Mature: 38831

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNTFRSLVVGKFFPILVFSFIGFLTPANSLIAQIECSGAACTVIPSNISSQFNGLEYEI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCHHHHCCCCEEEE
HTKYLNEVVDSMEDAALLTTINSSMMGNGSINRFQVGAGLSAAGVKNDDIQIQYGGITLP
HHHHHHHHHHHHHCCEEEEECCHHHCCCCCCCEEEECCCCEECCCCCCCEEEEECCEECC
NLPNGGASLAPTLMAGVNLGWLTGNGPADQKDKDEKDDGGRSFLHRINIFAHGFQGKLDQ
CCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCC
GDLKELNDQSDQYKFSGNYNSFGATVRFQLIRERYTRLDFFGFTGLSLGLGFHRKTEEMN
CCHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCC
LGYSPTQIPKISFGPATGRWDADFALDYRSRSQSLPIDIRTGVRLFYFLTIFVGAGMSQN
CCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCC
SGNSNIHLGVTGPMVLTLDAAAAGLPIDFLKGQAASSTGNLAIRSHGDAKAKDSVNYLLG
CCCCEEEEEECCCEEEEEECHHCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHCC
>Mature Secondary Structure
MMNTFRSLVVGKFFPILVFSFIGFLTPANSLIAQIECSGAACTVIPSNISSQFNGLEYEI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCHHHHCCCCEEEE
HTKYLNEVVDSMEDAALLTTINSSMMGNGSINRFQVGAGLSAAGVKNDDIQIQYGGITLP
HHHHHHHHHHHHHCCEEEEECCHHHCCCCCCCEEEECCCCEECCCCCCCEEEEECCEECC
NLPNGGASLAPTLMAGVNLGWLTGNGPADQKDKDEKDDGGRSFLHRINIFAHGFQGKLDQ
CCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCC
GDLKELNDQSDQYKFSGNYNSFGATVRFQLIRERYTRLDFFGFTGLSLGLGFHRKTEEMN
CCHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCC
LGYSPTQIPKISFGPATGRWDADFALDYRSRSQSLPIDIRTGVRLFYFLTIFVGAGMSQN
CCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCC
SGNSNIHLGVTGPMVLTLDAAAAGLPIDFLKGQAASSTGNLAIRSHGDAKAKDSVNYLLG
CCCCEEEEEECCCEEEEEECHHCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA